| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_135664
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4920 |
4 |
5321 bp |
AK354465 |
Not available |
Available |
None |
CDS Structure of MLOC_4920
Contig Sequence (5848 bp)
>contig_135664 5848 assembly3_WGSMorex_rbca.fasta
CCCTCCCCCGTCCACCCGCCTTCTTAGCTCTAGGTTTATCAACATGCACGGACTGAATCG
AGAGCCTGGTTCTGTACGATGACATTTCGTAGTATAACAACTCGGCAGTGCAAAAGAAAA
CGCGATCTAGATCTTGTAGAAGCCGTTTCTACAGGTAGGATCGACAAGCCTGGTTTGTTG
CCATAGGTAGGGTTGTTCGAGTACATGACACCAAATAAGGAAAACGCATGCCCCTTGATT
TCACGCATTTTTTCCCAATGTTGCTGATTGAAGAGTGAGAGCCAGAGTCACCCGATCTCT
TTCTAATTGGAGGCGCCTTCTAATTGGTGATAGAGTAAAGTGAAGGTCCATGCCACTGTT
AGGCAACACGCCTACACCTGTAATAGTAGCACTACCTTGTTTCCAGGGCATCTACAATGC
CTTTTTTGTATACCTACTGCCCGTGAATCTGGATGTCCGCCACTCACCAATGCCGCCCAT
CCTAAGCCACACATGACATAGCTTGTGCACGGCATTAACAGAAGTAGCAGAGATGTGATG
TCCTTGGTGAATGTTTGTTACCTATGTGTAGCACCGTGCATGTCCTATGTACCCCGATTC
GTCAGGAGCTAACAGTTTGTGCTCTGTGCACGGAATAGGAATATTCGTAATTAAATAGAG
TACTCCATAAATGTTTTTGTCCTTAGTAACTGAGTAGTGTGTAGTACCAAAGGAGCTTTT
TATAGATATTACATATTTTGCCTCTGTTTCAGTATTATTTTCCCTAAACGACCTTCATTT
GGACTTAATCACCCTACTGGCCCCTCCAAACAATTACCTGCACTTCTGCCCCCAGAGATA
TGGCGCCGTTTATATTGGCATTTTTTATGGGGGAGCGGGGCCGCTTCAATTGGTGTTTGT
AGGTCGTGCCATTTTTGATGGCATATAAGGTTGGATACCGTTATCTAGGTGCCAAGGATC
AGTTGGGGCCAGCGCTGCGGTATCTTATACTGACATATATACTCAATGTGTGATAGAAGC
TGGTGCTAGCCTAGATAGTTGGCTGCTCCACAAACTGTACACTGGTCATGGGTTAGAATT
CTCACTGGCCATGTGTCACTTTGGAGCAATCAACATGTATATATGTCTCGTTAATTTCCA
TTAACACATAAGAAGGCTATACTTGAGCTCAAGTAGCAAGCAAGTTTCCCCTTCGTGTAG
GATTTTTTTTCTGAGTCACAGGGTACAAGGCCCTTGTTCCATTGCATTTTGCATGAAATA
GCATACAGTGTACATCACCTTACCACAGAATTAACCATTGCTAACGCAGCACCTGAATTA
ATTCTATCCAAAACATTCAACAGCCACAGGCATTAACATGTCCTTTGTACCCTGATCTGT
CAGGAGTTGACAGTTTGTGCTATGCGCACATAATAGGATTCTGCATAATTATCTAAAGTA
ATTCATAAATGTCTTTGTCCTTAGTAACTGAGTAGGCTGTAGTACCAAAGGAGCCTTTTA
TAGATATTACATCATTTACCTCCATTCCGGTATTATTTTTCCTAAATGGCCTTCGTTTAG
GCTTTAACTACCCTACTGGCCCCTCCAAACACTTATTTGCACTTCTGCCCCCAGAGAAAT
GATGCCATTTATATTGGCAATTTTAGGGGGAGTGGCGCCACTTCGATTAGTGTTTCTAGG
TTGCACCATCTTTCATGGCGTATAAGGTCAGACACCGTTATCTAGGTGCCGTTGGATCGG
TGGGGCCGACGCTGTGGTATTGTATATTAATAGAGATAGTCAATGTGTGGTAGAAGCTGG
TGCTAGCCTAGATGATTGGCTGCTCCGCAAACTGTACGTCGTGGGTTCAAATTCTCACCT
CTGCGATGCTTCAGCTCAAGTAGGAAGCTGTTTTTTCTATTGTAGTTTTTTCTGAGCCAC
AGGGCCCAAGGCCCTCGTTTCATTGCATTGTGCATGAAACATCATATATTGTACAGCACC
TTGCTACAAAATTAAACACTGCTGATGTAGAACCTGAAATAAATTCTATCCAAAACATTC
AACAGCCACACATGTATAAACATGACCGCCCTGTAGGATTTATTACGCTCTATTTTATTC
GCCCGGTCATCATGCCATAAATGGGCATACATACAAGGCACAGACACGCAAACTGGAGTC
GTCCAGTGATGGGCTTGGTTACTTAGACACCAAAAGGGACCCAACAAAATCAACTGGAGA
AAGAGGTACATTACATACAGATCTTCATGATGAAATAACGAGAAATACATTGGTAGTGTT
GATTAATGATGCAGATGTTTCTCCCTGATCCCTGCCATCTTCACGGCTAAAGCAGAGTAT
CATCACACTTGGAGGACAAATTTGGCCACAAGCACGTCCCCCACTCAACAGTGTGTCGAT
GAGTCACAACTGCAGGGTCGACTATTCAAGAGTCGCTACCCCAGAACGACTCGTCGACTC
AAAAACCCTGCTTAAAACACAAAGAAAATCGGAAAATAAGAAGCCTAGCCAGGAAGAAAA
TAAGAAAATCGGAACAGGGAATATAAAGATGCTAAAAGCCTAAAACAGCCAATCATCCAC
CTGTTTCGGACCTAGGACCGGTGGATAGCTAAAAGCCTAAAACAGCCAATCATCCACGCT
AGCGGTGTCCTGTCTCGTGTGTCACGGTGGTGTACATATCTTGATATAGCGTATTGTAGC
ACCAGTTTTCTGACTCTGTTAATGCCTGCATGATGGCATCAAAGTGTAAAATAAGTGTTT
GGAGGGGCCAGCAGGGTAATAAAGTCTAACGAACGTCATTTAGAAAAAATGATTCTCCTT
TTCACACTTTGACCTGTCAAAGCATGCATATTTCTGCTGGACGGAGAGTTATCTGGAAGT
TGTCTGTGTGATACTTTAAGGAAGTTGCTACTGAAACGTATAAATGTTGAAGTGTTTGCT
ATGATTGTCCACGTTGTCCCTGCCTTTTAGTTTCTATCTCTGGCACAAGAATCTTTTTTT
TTTCCATTACCTCGTATCTACTCTCCTTTTACCATGAATAGATAACATAATTTTTTCCAG
AAAGAATTCTAACCTCTAAATTCTTTTCCTCTCTTTAGTGGAACCTTGTATCTACTCTCC
TTTATCATTCCTCTCTTCCATATTGGATTCTTCAAGGAGTTATGGCAGGCTGTGATCTTT
ACCCCATCATACCAACGATTTTTGCCCAGATTTTAGTGAGGTCCTGGAATTGGTCATCAT
AATGAATTTGTACCAATGTCCACCAGATTATGATCAGACTAATCTGGTCTGTTTTTCACA
ATCATGTTTCTTCACAGTATACCAATCAAAAACAAAAGAGGTTCGAAGATTCGGAAGTCA
CTCTTTCTGTTTACAGCCATGTTTATTTAGATGTTAGGCTAAAAGTAGTAACAAGTATGT
TTACACTAGAGAGAGAAGACATATCCGCAGAGGAGTAGACATGTGCCGCTCCGGTAGCAA
GAGGACAACCAACATGGCTTGTTTGGCGTTGTCTGCATGCCAAGAGTGCTCCAATGTCCA
AACACCGCCGACCAACAGCAAGCCCCAACGGACACGCCACCGCAGACCCTATCACCACGC
CGCCACCGCCAACTCCGAACTAGACACCTTACCACAAACAATGTGCTCCCATCAAGAGGT
AAAATCTCCATAGTGATGCTTCCAACAAAGAAACAACGTGAAGGACACCGTCATCTCCGA
TCCAACAAGGCAGATCTTGGTTTTCACCCGGAGACCGAACTCGAAGACGAGAGAGGTGCA
AGATCTCCTCGGTGAGGCCTTCAACAAGGAAACAACACCCACGGGCGTTGTTATCACCGG
CCAAGAGCAAGACTTACGTCTGGAGAAATTGCATACCTACGTCGGGGATAGCACCCCGGA
CGCACCCACCAGCTGATCTGGAGCTGCCCCTCCTCACATCCAGACCGGAGCACGACGAAG
CATCGACATCTGCACCACACGCCGCGGTCCGCACCACCACTCGCACCAGCCACGGGCCAG
GAAGGGCCCAGATCTGGCCGGCCTCGCCCGCCGCCGCCGCCGCACACCTACCGGAGGCAC
GACGGAGGAGCGTCACCTCCAACCTCCACCACTACGCGTCGCAACCTGCCCATCCTCCTC
TGGTCCGGACGGGCTTGGATTTGGCCGGACCGCAGCAGCCACCACCGCAACCTTGCCTCG
GCGCTTCATCATCTCGAGCAAGGTTGTCGCACCAAGCCTTGATGGGCTCTCCACGTGTCG
ATGGCCAGCATCCCCGCCACCACACGGTCTTGGCTGAATCCAGCCCGAAATCCGGCTGCC
ACCTGACGAACGAGGCCAAGCCTCTGGAAGCCGTCGCACCGACAGAAGAACGCCTTGCTG
CCGCCGTCCCCGAAGCCAGCTGGACTTTGCCGGGGAGCCCCATAGGGGGCAGCAAGGGGA
GGGATGGGAGGCAGTGGTGGATTTAGGGTTTCCCCCGAGCCGCTAGAGGAGGTCGACACG
GGGGTGGGAGTCAGACACGCCCGATCTCCAATACTAATTAGATGAACAAGGGTGTAACCA
TAATAACTGATCTAGCATCCTTTAGGGAAGAAGCTCAATTATAATTTTGATCATTAGCAT
TGCTACCCCACAGGTTGAAATAATGATCTCTGATGTATATTGCGTTTTGTGTACATGACG
CAGGATGAATTGAATGAGCTTGAAACCATGGAACCTGCATCTGCGGCATGCCGAGAGTAA
GTAATATCGAGTATTATCACATATGTTCGTGTTCCCCCTCGCCCTTATATTCCAGTTTGT
GATTGTTTTTTCTCTTTGAGTAAGCCAGGGTGATCACTAGTACTGAAGGAAAGCCTGACC
CGCTTCTTCCAATGTAAGTGCCACCACATCTTATTCTTGCTAGTACCTCACCCTACGAAA
TCTGACCGTATGAGCACACCCGCAGAGTGTAACACCGCCATGTTTTTGCAGCACAAGTAG
CCCGGAGAACTCTTCATGGGACAGGTGGTTCCAGCGCGTGCGAAGCTCTCGCAGCAACAA
ATGGTGGCAATCCAAAGGCTCCGATTTCGCCTAGCTTTCACGGAAGCTGAGACAAGCTGT
GTGCAGATTCAATCGCCCCTGATCCGTATGGTCCGTCGTTGGCCTGGCAACGGAATACAA
CCCAGTTTTCCTGAGAATTGTTATGTATGTAATCCCTAACAAAAACATGAATGTATCCTC
ATTAGTCCTGACGATTGCTGTTCAGAAAATAGTCCTGTAATTCATCTTCCTCAGGTGCTG
ACCAGCTATGTTTGATTCTTGTGGTCTTGGAGCAAAATGGTCCTGTACTTTGGGCAAGTT
TGTTGACCTTGGAGCAAAATTTCTCATGTGCATCTTATTTTGTCGAAATTTGCTGAAGCA
CCGCATTTCGTGCGATTTCGTTACTTCTCTTTTTATATATATATATATATACTTTTCATG
CATATAATATCTCAAAACATGGTTGTGTAAAATATTGGGTCCACCATCTCACACTGTTGC
ATGGGGACTGCATGTAAGACTACACCTGAGGCATCTCTCGCTGACATGTGGGACCAGCTT
GCAGGGGTCAACTTGGATCATGTACCCGCAACAGCACAACAAGTCTCGACCCTCTCCCGT
GAGGGCCATCATCCATCCACATCCAGTCTTCGGTTCTTCGCTCCTCGCCAACCTCAACCT
GCCATGGCCTCCACCGTGGCCTTCACCCCCGCCGTCGCCGTCGCCGTCGTCGGCGCCAAT
GTGCAGCACGCTCGGAGGACCTCTTCGCTGCGGCCCGTCCCGAGAGCCAGGCCCGTGGCT
GCGAGGGCCAGCGCCGAGCGGGACGGTG
