| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_135646
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4902 |
1 |
1657 bp |
AK249000.1 |
Available |
Available |
None |
| MLOC_4904 |
1 |
2072 bp |
MLOC_4904.1 |
Available |
Available |
LOC_Os03g13230.1, FRAME:-3, EVALUE:0.0, 13103.m01533 protein pentatricopeptide, putative, expressed |
| MLOC_4903 |
3 |
1991 bp |
MLOC_4903.1 |
Available |
Available |
LOC_Os03g13240.1, FRAME:+1, EVALUE:0.0, 13103.m01534 protein peptide transporter, putative, expressed |
CDS Structure of MLOC_4902
CDS Structure of MLOC_4904
CDS Structure of MLOC_4903
Contig Sequence (8507 bp)
>contig_135646 8507 assembly3_WGSMorex_rbca.fasta
AATTATCTTCCTTATACTGCATCATTCCCTTACTTTTATGTCAATGTATTAAATACAACA
ACAAAAGGTACTTGCGATGTTAATGAACACACTGAATTGTAGACAACCTTCAGTAAGGCT
TATTTTTGGAAAGGTCCTTCAGTAAGGTTTCAACTTGATGTTTGTGGAAACGAAATATAT
GCAACAAAAGTAGTATGAGCAGAGCCAAGCAATCATGCTATAAGCATCACAGTAGTTCCG
CGTGAGTACTGGGTACATAATATGATAGAAGCAAAATTATTACTACTGGTATCAATAATG
ATCGACCTGATGTGTGCAGATTTAATATATTGCAATACGTATTCATGAGCCATTCTGAAA
ATGTGCATATAGATTCCTTGACAAGGCTGCCATCATCCTTTGACTCACAAGTATAAAAAT
GTAAATGTAATATAACTATGATTTCAGGGTAGGGTTGGACTGTCACTTCTTTTTATCCAC
TGTATTGTAACTCTTATCTCTGCTGTATAATAACTGTTGCAACATTTCATCAACCTATCT
TGTACAGATTCCTTGACAAGGCTGCCATCATCTCATCTACTGATGCCAAGAGTGACCTCC
TTACAAACCCATGGAGGCTTTGCACGGTCACCCAGGTGGAAGAACTAAAGATCCTAGTAA
GAATGTTCCCGGTCTGGGCTACTACTATCATATTCAATGCGGTGTACGCTCAGAACTCTT
CCATGTTCTTAGAGCAGGGAATGGTTCTCGACAAGCGGGTTGGGTCTTTCAATGTTCCTC
CTGCGTCCCTCTCGAGCTTTGACGTAATCAGTGTCATGATCTGGGTTCCACTTTATGACC
GTGTTCTCATACCTATAGCTAGGAAGTTCACTGGAAGGGAAAAGGGTTTCTCAGAGCTAC
AACGGATTGGCATTGGACTAGTGCTTTCCATTTTTGCAATGGTGTCTGCAGCTTTTGTCG
AGGTGAAGCGCTTGGAGATTGCCAGGTCCGAAGGTCTTATCCATGAGAAGGCTGCGGTTC
CGATGAGCATTCTTTGGCAAATACCGCAGTATTTCTTTGTTGGCGCTGCCGAGGTTTTCA
CTAATATAGGTCAGCTTGAGTTCTTCTATGATCAGGCCCCAGATGCCATGAGAAGTTTAT
GTGCTGCATTTGCACTCGTCACGGTCTCAGCAGGGAGCTATTTAAGCTCATTCATATTGA
CCTTGGTGTCTTACGTTACAACTCGAGGTGGAGATCCTGGATGGATCCCGGATAACCTGA
ACGAAGGCCATCTTGACCGGTTCTTTTGGTTGATTGCAGGGGTCAGCTTTGTGAATTTGC
TGGTTTACATCAGTTGTGCAATGAAATACAAATATAAGAATGTGTGATGGTTTATCTCCA
CAAAAATGTGTGATGGTCATACCTGCTGTGGAATCAGTCCTTGTAATCTCAGATTCCAAT
ATCCATGAAAGCTGTGCATTTTATAGACTAAGACATCACATGAGCTGGCCCTCTCAACAG
GTCCTCAAGAAAAAGACTTCTGGTGATGTATTTTAGACAAATTGCTTCGGTGATTGTGTT
TTGTATGAAATTTGCAACACCAGAGTTGTACAAAGATAATTCTGTACATGCATATCCAAT
ATTTTCCTGTTCAAAACCATCCTGTTATTCCTTAAAGCGGTCCGAAAATACATGTTGTAC
TCGAAATCACGCGTTGCACGTGCATGTAAGAGCTAACACTGCAAATGAGAAATTGAGAAG
CTCCAGAACCAAAAATCAAAGATATACAGCATAAATTCTCTATTGCTGTTGTTTTACCAT
TTCTTGCAGCTGCTTAGAAAATGTCCCTATTTAGCGGATATGGTAATGAAAAAAAGAAGG
GAGCATATGCTCATGCATGTTAAAAATGTATTTTACAAATTTTAAAAATATAAGAAAAAG
ATGTGTTCGTTGTCACACTCAAATGGCACATGCAAATTTACAGATGAAAAACTTAAGTAT
TTGGCTTGTGTAAAATGAACAAGTCGAACGTCAAATGTTACACTTAATTTTGTTTTTTTC
ACCAACGAAGCACCGCTATCCCATATGGCATGAAAATTGGCAGGCACACTTTCCACACTG
ATATGGACATCTGCAAAAAAAAAAGAATTTTTAAAATTTATTTACTATTTATTTTGATTT
TACTGTTCATTAGGAAGCATGTGCTCCCCAGAGCCAAAAATGCATGTCCTTTAGCGGATA
TGGTAATGAAAAAATGAGACATCCACATAATTTAATCTTTTAAAAGAGCAGATACATTGT
ACAAATTTGGAGGGCATTTCCCTAATAACAGCACGAGAAGGACAATCTCTCTGGGGTTTT
TTCATATTTGTTTTTTTATGCAAAGGCAATCTTTTCGGGTGAGCTGCTGGTTTGGTTCAT
GCGGTGCATATGACCTAGTACATGGCTACATGGGTCAGCCGCCTTAACAAAACGAACACC
AACGTACCAGGCTTCAGGTCCAGGCCAGGCACCAACCAAACAGCTAGTCTTCACTATTTG
CTCCAAAATTGCTTTAAAAAAACTATTTGCTCCATAAAAAACAGCTAGTCTTCACTAAAA
AAACAAAATTGTCTAAAAAACTAAGAAAATAAAATTTCTGAAAATTAAAAAACTAGTAGT
ATTAGTAGTAGCTCTAAGCTCGCTCAGAAAAAGGAAAAGAAAAGGTAGTAGCTCTAACCT
CTAAGCACTCGAGGAGTCAGGCAGGAGTCGGCGGTCAAACCCAGCCCAAATACAATACTG
CCCTCCCTCCCTCCCTCCCTCCCTCTACCCAGTTTCCTGATTTTTTTTCCTGCCGATTCG
ATCTCCGCGACGGAGACCTCCATCCCCATGGACGCGGCAGAAGAGAGGAGACTGCTGGTC
CAAGGGGACGGGGATCAGGAGCCGCTCCTTCTTCCTTCCCTGGTATAATTTTTGCTATTT
CTTCCCTCTTCTTCTCTGAATTTTCGTTACACAGAGCCACAGGCAGACCACAGCTCATCC
TTCAGTGAATTTTCGTTACACGGGAGCCATGGCCTGAGGTCTAGCTTCAGTGATGCTGAA
AGCTTGCCTGACTGACGCGCGGCACTGTTTTCAAATGCCCAGCAGTAAACACTGCTATGA
CTGAACATGTTGGGAAAATTATGGGACGCGGCCTGGTTACCGATTTTCCCGGTATGTCCT
TGGGTGGTTCGGTCTGAATTCTGTTGTTTTCTTAATTAACAGGATGCAAGTCTTTACACA
GGCGATGGTTCAGTTGACATCAAAGGCCGTCCCGCGACAAGGCGCACCACCGGCAATTGG
CGAGCATGCTGCTTCATCCTAGGTAACTTATAGGGGTGTTCATACACGGTTTGGACAGCT
TGGTCCAATTCGGCTAGTTGCTTTTCCAAAAGTTTTCAAGAAGAATCAAATTGAGTATCA
GATTGCTTCACTGTGCCGGTTTTACAAAATTTTGGTCATGACTTCCTTATTTTCTTATAA
CAGGTTTTTTTTATATCGCTGAGCTATTTTCCGTAGTAAGCACATCCCTCGATGCATTTT
TATGAATGACTGAACATCTAACCTATTCGGTGCTGCTTGTTAGTAATAGTAGTATGAAAT
TTAAACCACAATAATAGGAACCTTTATGTAGAGGTATATGGTGCGAAACAATCTTCACTA
GCCTAAATACTACCGGTCAAATGGTACAAAACATTTCGGAGACTCTTGTGCATATTTCTT
ATGTTCAGCGATGAGGTTTCGCAAGTTCCAACTATGTTAGTTTGGTGACAGGAACTGAGA
GTTGTGAGCGTCTGGCCTACTACGGAATTGCAACAAACCTAGTTACTTATCTGAAGATAA
AGCTTCATCAAGGAAATCTTGAAGCTGCAAGAAATGTTATCACTTGGCAAGGGACATGCT
ATCTGACTTCCCTCGTTGGAGCCATCCTAGCAGATTCTTATTGGGGAAAGTACTGGACTA
TTGTTGTTTTCTCGTCGATTTATTTCATTGTAAGTATAAGATAAGGCAACCCAAACTTTC
TATTCCTCCTTTGTTCCATAGTGCTCTCTACCTGGCAATTCTGAGTACTGAATATTTGAA
TACAAAACTTTTTTTTACTTTTCAACAAATATAATGAAGATGTGGGTCTTGTTACATTCA
GTTTGGTTTTAAAGAATCATCGATTTGTGCATCTCAATATTTTTAATTATCCATTTTAAT
CATGCGTCGCCCTTTTCACTGAAGGGTCTGGCTGGTTTAACGCTTTCAGCATCACTTCCA
GCACTTCAACCACCTTCATGTTCAGGATCTGTTTGCCCAGAACCAAGCCTACTTCAGAAT
GGCACATTTTTCCTGGGCCTCTATATGATTGCCCTAGGAACCGGAGGCATTAAACCTTGT
GTGTCATCCTTTGGAGCTGACCAATTTGATGTCAGTGATCCGACAGAGAGAGTAAAGCAG
GGTTCCTTCTTCAATTGGTTCTATTTCTGCATAAATGTCGGTGCACTCTTATCAGGCACT
GTTATTGTTTGGATACAAGATAACTCAGGTTGGGGAATAGGATTTGCCATTCCTACTGTA
TTTATGGCACTGGCTATCGCAAGCTTCTTTTCAGCCTCAAATATGTATAGATTTCAGAAA
CCCGGTGGGAGTCCAATTACAAGAGTGTGCCAGGTTGTTGTCGCAGCATTCCGTAAGTGG
CATATCGAGTTGCCACTCGACGCTTCTCTTCTGTATGAAGTTGATGGTCGAAAGTCAGCA
ATAGAGGGAAGCCGAAAGCTGGAGCACACAAGTGAACTTGAGTAATAATCCTTATTCTGC
ACCTTTACTTTAATTTTGGTGTCATATGTTGATTTATTTTTGAAACAACACAGGTTACTT
ACAGTACCAATATAGACACTGAAATGACACAACCTTTTAGTAAGTTTCCAATTTGAGGTT
AACGGAAAATGAATACCTAAATGCAACAAAAGGAATATGGATAGGGGGCATCCATGCCAA
AATGTATGGCACTAGTTCATGGTGGGTACTGGGTACATAACAATATGTGTATAATGAGTG
CAACTGGTGTAAGGATAAAGATGGACTATTGCTTTTTCAATGTGATACTCGTCTTTCTCC
CGGTGTATTACTTTTGTAGGTAGCTTTCGCGTTAGCGCAAAACTACTTTGATGTATGACT
GTTAAAAAATATCATCCATTTCACTTTTGTACAGATTCCTTGACAAGGCTGCTATCATCT
CATCTACTGATGCCAAGAGTGACTTTTCTGCAAACCCATGGAGGCTATGCACTGTCACCC
AAGTGGAAGAACTGAAGATCCTAGTAAGAATGTTCCCAGTTTGGGCGACTACAATCATAT
TCAGCGGGGTATTTGCTCAGAACTCCGTATTCGTGGAGCAGGGAATGGTTCTTGACAAAC
GGGTTGGATCTTTCGATATTCCTCCTGCATCCCTATTAACTTTCGACGTAATCAGTGTCA
TGATCTGGATTCCAATTTATGACCGTATACTCATACCCATAGCTAGAAAGTTCACTGGAA
GGGAAAAGGGTTTCTCTGAGCTACAGCGAATGGGCATTGGATTAGTCCTATCCATTATGA
CAATGGTATCTGCAGCTCTTGTTGAGTTGAAGCGCTTAGAGATTGCCAGGACTGAGGGTC
TTGTTCATGAGAATGTTGCTGTTCCGATGAGCATTCTTTGGCAAATACCACAGTATTGCT
TTGCTGGTGCTGCCGAGGTTTTCACCGCTATAGGTCAAGTCGAGTTCTTCTATGGTCAGG
CCCCAGATGCCATGAGGAGCTTATGTGCTGCATTGGCACTTGTTACGGTCACGGTGGGAA
GCTATTTAAGCTCAATCATATTGACCTTGGTGTCATACCTTACAACTCAAGGAGGAGATG
CAGGATGGATCCCAGATAACTTGAATGAAGGCCATCTCGACCGGTTTTTTTGGTTGCTGG
CAGGGATCAGCTTTGTAAATTTGCTGGTTTACATTGGTTGCGCAATGAGATACAAATATA
AGAATGTGTGATGGTTATAGTTACTGTAAAAAAAGCTTTCTGTACTTTCAGATTCCATAT
TCATCGAGGCCATGCATTGTATAGACTAAACTGACAGCTACCCTCCTCGGCAAGTTTTCA
AGAAAAGAGTTACAATTGGGTTTCTCTTGCAATTCTTCTAGTGATTTATTTATGATGTTT
TTTTTTACGCTTCGGTGGTTCGGTTTTGTATGGAATGAGTACTTGTACCTGTTTCAAAGC
ATCATGTTATTCCTTCCAAGCAATCAGTAAAACACTGATGTACTGATAATTATGGGTACC
ATGCTTATGTAAGAGGGAACCATTGCAGATGGGAAATTGAGCATCCACAATTCTGCAATT
AAATCCAACGTTATGAAGTATAATTTCCTTCTGATTTGCCAAACAAAGACAGGATTTTTG
TTGGTTGATCATTTTTTGCAAACCAGCAGTTGTACAAAATGCTCACCTTTACAAGATATG
TTAATACAAGAAAGCAAACATGTACACACTTTAACCTTCCAACAGATCAGAAACATTGTC
CAAGGTACCGCAGCTGCAAAATTTGGAGGCCATTTCCCTAGTTGCAGCTTGATAAGGACA
ATCTCTTGGATCCTGGCATTGCAATAACCTCATGTGACACCAGCTGCTAAATCAATAGAT
GCTGCACATCGACTTTAGCCATGAAAAAATGGATAATATCAGAAGTCAAACCTATCACCA
TATGCAGCATAGATCACCAATAGTCTCTGCAAGAACAAACCCCGTTCTTGAAGTGATGAA
ATATATTCGAGTCCCTAACAATGATCTCTCTCTGAGCAATCCGCGATATGAGCTTAATAG
CAGTGTGACAGTCCCCACAGATCCGCAGATTCTTGAAAATCTTGATAGGGGAACCCTCTG
GAGTAGCAATGATCCCAAATGCAACAGCAAGTCGTTCGCTGTGGTAGCTAATGTCATGCT
CCTTTTGCTCATCTTCGACATCATGGAGAACAAATCCGGTGTCCGCTACATAACCTTCTT
CCCTCATTTTCGCATACAGCTTCTTCAGAAGTGCATATATTTCTTCAGTTTGAGGATGCA
ACTTATCACCGACCAGAAATACATGCACCCTTCTTCCAACTTCAATCCAACTTGAGGCCG
GCATTTTCGTTATGCCCTTTGTCTCCATGATCTTTCGTACACCCTCAACTTCATCAAACA
GACCAACCGATGCATAAATATTAGCTAGAGTAACATAGGTCGCAGGATTTTCAGGTTCTA
TTTCGAACAATGCTTCCGCTGCCCGCCTAGCTAAGCGGACATTCTTGTGAATCCTGCAGC
CACCAAGCAAGGATGCCCATAGGAACTTGTTAGGCTTGACAGCCATCTTGTTGATCATCT
CCTCTGCCCGTTCAAACTGGCCCGATCGGCTGAGGAGATCGATCACACAAGCATAATGAT
CAGCGGTGTGCACAATGCCATACTTATCCTCTATCAAATGGAAGAGCTCCAGACCTTTGT
CGACCAGACCAGCATGAGCACAAGCAGAGAGAACGCCAACGAACGTGACATGATCAGGCC
TGGTTCCTGACCTCAAGAACATGTCGAAGTAGCGCAACGCCTCCTCAGGCTGACCATTCT
GCGCATAGCCAGAGATCATTGCCGTCCACGACACCAGGTCCGCCTTTGGCATCCCCTCGA
ATACACGCACCACACTGGCCATGTCCCCGCACTTGGAGTACATGTGCAGGAGCGCGCTGT
CTGCAAAGCACGAGTCTCCGATGCTGCTCTTTGACATTCGACCATGCACTTGCCTCCCGA
GGCTCTCGACAGCGAGCCCTGCGCAAGCACGCAGAACCCCCGCGTAGGTGAACTCATTCG
GACGAACACCTCCAGCTCTCAGCATCTGGAGGAACAGCCTGAATCCCTCCCCGCCGCGCC
CGGCGTCGAAGTACCTCTCCACCATCGCCGTCCAAGAGACGACGTCCCGGACCGGCATCC
CGTCGAACACCCTCCTGGCGTCGTCCAACCGGCCGCACTTGGCGTACATGTCCACGAGCG
CGCTCCACATGACGGCATCGCCCGCGCCGATCCCCCTCCTCGACACGTGGCAGTGCAGCT
CCCTGCCCGCGCGGGCGCACCGGGCGGCGGTGGCCGCGGCGAGCGCGCTGGACGCGGTGA
ACTGGTTGTCGGCGCCGGCGTTCCCGGGCTCCTCCTGCATCCGGCGGTAGAGCGCGAGCG
CGTCGAGGGGCCGGCCGTGGCGGGAGTAGGCGGAGACGATGGCGGACCAGGAGAAGTGGT
CCCTGTGGGGCATTCGGTCGAACAGAGCGCGCGCGGAGGGGAGGTGGCGCGGGGAGCGGG
ATAGCGCGGCGATGAGGGTGTTGTAGGAGCAGCGGTCGGGGCACGGGATGGAGGGGAGGA
GGGCGAGGGCGTCGGGGAGGGAGGCCGGGTGGGAGGAGAGGAGGTGGAGGAGGCGGTTGG
AGAGCAGCGTGGAGGGCGGGAGCGAGGCGGCGGCCGCGGCGAGCGCG
