morexGenes - Barley RNA-seq Database

Contig contig_135631
Source Contig contig_135631
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_135631 (10009 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_135631

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_4896	4	4819 bp	MLOC_4896.1	Available	Available	LOC_Os07g49010.1, FRAME:-3, EVALUE:0.0, 13107.m05263 protein TOPBP1B - Similar to DNA replication protein TOPBP1 from, expressed
MLOC_4895	1	156 bp	MLOC_4895.1	Available	Available	None
CDS Structure of MLOC_4896

CDS Structure of MLOC_4895

Contig Sequence (10009 bp)

>contig_135631 10009 assembly3_WGSMorex_rbca.fasta
CATGCGACGTTCCCCAACATTACTATGGCGTCATACACCGAGGATCCATCCACAACCAGG
TATCCCCCCCTTCCCCCATGTCAACAACTTCGATGGTAGTCACCACGCCCGCACAGGTGT
TCGTCCAAATGCCATTGAGCTTATTTTCGAACATCGCGGCATTTATTTAGAGTACAAAGG
ATGACGGGGTACTCGAGCATGGAGGATGAGTTGTTGTGCGTTGTATGATTGGTTGTATCC
GCAGATTTCTTAGGCAGGAGCATAATGGGGTTCTTCTAGCACCGTGTGCATGATTCGTAT
CTCACACGAAAGCATCTTGCGCCTACGACATGCACATCATCCATGCCCGCAATGTGAAGT
CGCCAAGTTTTATGAGCGGTTGATATGTTGGAGGCAAGGTGACCATTACACGCAATAACT
GAAGAGATCATAAGTTTTGCTTTTTCTTGCTCAACTTGTTGATTGATTCATTCATTTACC
CAATGTTGCTCTACACATTGTGTAGCATGTATGTGTTGTCGTGATGTATCACAAGATTGA
GGACAGATCATTTACGCACATACACTGTTTAATGAATCTCAAGGTGCAGTACATATGGGA
TGACAAGACCCGTTCATGAAAAAACTTATTGAACATTCGGTTACTCTATAAACTTTGATT
GAAGCTCAAGGTGCAATATATATAGGATGGCATGACCCGTCCATCTATGAACTTGATGAA
TCCGTTGTGTTTTACAAATTTCATCCGATTAGTTAAAATATAATTTAAAATGTATGCGAA
TATCGTTGAATGGCTTCCTCCCCTATCCGTGTCAGACAAAAAGTTGTGGTGTCCAGTTTA
CGGATTAGCATTAGAAATTACCTAACCTAATACCACTCCTGCTACTTCTGGCATCGATGT
GTTCACCAGTTTGCCCGTGTGTGACGGACCGAGATATCGAGTAACCGATTCGCCCAACGT
ACACGCATGTATTACAGATGCCAACAACCATCCAGTCAACTTTTCACAGTAACCAATGAA
TATAATTAGCAGATTAAACTAGGTTCTCTGAAACCCAAACAGAAACATGATGCTGGCATC
CCGTCTGAAAACTACAGCCAGAGGAACGCCATCTGGCTTGAAATTAGACACTGATCTTAT
TGCAACAGCCCAGCGCAAAATGATAGATTAAGCATTGTTGCTGTGTAGGTGTACCACACT
CTGCCGTGTGCGTTCGATCAAACCACTAAATAATCCACAAACATAGGGCAGAAGCTGAAT
GGATCTGAGTTGCAATGACAACTTCAATGTGGATTTCCGAGTGGCGCAACGTTAATACAA
TGGCACACATCACTCTCATTGCTAATTTGCTACATACAGTATATATTATTAACACAGCAG
CAACAGCACTTGCCAACAAAAAGAACAGCAGCAGAGCCAGAATGATCATTTGCGCTTGGG
CTTTGCTGATCTGCTGCCACCTTTCTTGGCCTTCTTAGGAGGCGGCTTCACTTTCACATG
CCCGTGGTCGCATTTGGGGCACAGCCACTCACCATCCACAACAGCAGCAGCTTCCGGCTG
CGGGTTCAGGCAATCGGCATGCATCCCAGCGCCGCAACCAACCCTGTTCCCCTCGCCGCC
GCCGCGGCATATCAGCATGGCAGCCCCTTCCCGGTTGCCCGATCCGCAAGCAGAACAGCT
TATTTCAGGGTCGCCTCCCCTGGCTGCCGCCTCTCCGGTGGTGCCGGCACCGTCGAGTTC
GCCTTGCTGAGAACGCTGTAGCTTCTGCAGGGACCTGTCTGCCAGGTCGTGCATGTTGAA
GAGGACGTGCTTGTTCAGAGGGTGGCCGGGCTTGCACACGTACTCCACCAGGTAGTCTGC
GCTGATGCAGGGGATGTCGTGGCTCACGAACTCCTGGACCCACGCGTCCGTGCCTGGCAC
GCCTGCGGATACCACCGCAAAACTGGCGCCGTGTTTCAGCACCCGGGTATATGGTGGGGA
GGTCGCTAAGATGGTGCCATCACCAGCCTTCACTACACGCTTCAGCGTGTCCTGTTGAGA
AAATGAAAGGTTTGTCAGATAAAAAGTGCATATATAGAGCTGCGGCATTACAGAGTTGCC
AGGATGCTTATCAGATAAAGAAGTGTGTGTGTCCACACTTACCAATGATGGAGAAATGCA
CTCTCCATATATGATGATCTTCATCCCATGGAAGGCGCCATGTCCAGTACGTTGCCTTAG
TTGACGCCATTTCCTTGGAGCATCCAAACTTATCGTGTCGCAGTTGTTAGGGCCATCACC
GTGCCACTCAAATGGTTCTTCCTCTACAAACTTGCCAGCCTCATTGCAAGCACTCAAGTA
ATCAGACTTGAGTATCCACCTAATATTTCAGAAAAGCAACAAACACTCAGGTATCATGAA
ACAGAAAAAGGGGCAAAATGACTGTATGTACATTTATTTTGACAAGAGGATCTAGGCAAC
AAGAACAAGGTATAAAGAACTAAACAGGAAACCTCTAAAAAGGCTCATTTACCTCCCAGC
TGCAGCCGCTGCAAAGAATTTTTCAGTTCTGCGGAGCTCAGGTGCGATAAAATGTGTCGC
TTGGAAAGACCAGTGATGTGAACCCCTGCATACTCTTCCCTTCAGGCGCCTAAGTATCGA
CATACAATCCTTCCTTAGTAAGTCATGTCCGCTTAAAATAAACCATGTTGGTTCCAACAA
GGCCAAGGTTGGGCGGTCATTTCCTTCTCTTATACTGTGGTTACCAGGCACATCTTTCCC
ATTCTGTACCGATTTTGTGATACATTTGGAACTTACACAGTTATTTCCATATTTTGATTT
AGGAGAGAGATTAGCATTGGATGGTACATTCTCCTTGTTATGGTTGGTAGAACCATCCAT
TGCACCTGCAATTTTTTTCTTTTTGCTGCTCCTCGGCTTTGTGTTTTGCACATTTTTGGA
TGGTACGTTCTCCTTGTTATGGTCAGTAAAACCATCCATTACATCTGCAACTTTTTCCTT
TTTCCTGCTCCTGGGCTTTGTGTTTTGTGCATCTTTGGATGGTACATTCTCCTTGCTATG
GTCAGCAGAGCCATCCATTGCATCTGCAACCTTTTTCTTTTTGCTACTCCTCGGCTTTGA
GTTTTGCGCATCTTCCAATATGTCCTCAAAGGAATCTTTGCAAAATGATCCAACTTCATT
TGCTGTACCATCCTTATTAGCACTCTGGGTATCCTTATCCACCATTGCCTTGTCAGCATT
TGTGGAGCACTCTGCAGCCCTCTTTATCGTGTCAACTTCAGCCTCAGATGGGAAGACACC
ACCAGTGTTGCAAGGTTCACTACCAGATACATGCTGTTGTGTGGCAGAAATTTTCCTCTT
TGCAACTGCTTTACGCACTCTGTTCTTTGGTACTCTATCAGGAGCGCATGTTTCATGGTT
ATTAGCACTTGCAGTACTTAAAAGCTTTTCGGTGGAAGCTTGGGGAGCTGCATCACAAAA
ATCCGACTTCAAAGATACAGCCTCGGCTTTATCAGCGGTTGGTGCATCAGCCATCCTTAT
GTCAGCAGGCTGCGCAATTTCTGGAACAGCACTCCTTGCTGTGGCATATGCCACCTTCTC
AGATGAACCTAATTCAAATTGATCATCAGTTGCACCACTTGGAAGTTTTTTAGGGTTACT
TCCCTTCGAAATCAAATCAACGAACTCCATCTTTGAAGCTGCTAGCACATCATTCATCTC
ACTGTTGGCATTCAGTGAGTTCTTGGCAGTTGTGTCTGCTCTACTTCTCAGGATTTCTTC
AGGAAAGGATGTTCTACATTCAGCAGCATTCGGACTGGTACAATTATTTCCTTTTTCTGC
GTCTACGTTTTCATGAGAAAGAACTGCCTCGATACCATCCTTAGACTTGGACTCACTTTT
ACAACGTGCAGATGATGGGCGTCTACCATTTGTAGCACTCCGAAGCCTCTTAGCACCAGC
GTTCTTCACTCTAGAAGTTGATACTTTCCTAGCACCTGTTTCCGTGGTTGCATGAGAAAC
CTCCTTGTCATGCTGCGAGTCCGTAGCTACCGCTTCAATGCTATTAACCTGTGATGCATT
ACTCATTGCTACATTCTGAATTTGACGAGAGAAACTTGAAACTGTTTGTTCAGCTTCAGA
ATCAATAGAAGGGCTTATAGCACATTCCTTCTCTGCTGCTGCTTCATGCTGTGCCAGTTT
CTTTGCTTTAGCCGGTAACTCTACCTTCGCCTCATTATCAATAATTTCAGGAAGTTTTTC
TGCTTCAGAAGACCTTGCAAGCTTCAAAGAAGTCCTCCTATAGGGCAACAGCTTCTTTCC
AGAAGAGTCAGACTTCTGCCTCTCCGTAAGATTCACAATAACATCACTGTTTACTTTACC
ATTAGGTTTAATGGGTCGAGATCCAGTGGAATTTTCCCCCAGATCAGAAACTGTTGCTGC
GTCAGATGTGATTCCCCTGCTTGAGAAAGGACTATTTGCAGTTCCAATTGCTAAGTCTGT
GCCACCATTTAGCAGTTTTGGACTGGCTGAAGAAAGCCTGCCCTTCGTTTGAGCAAGTAC
AGAGTCCGGTCTGTTCACATGTTTTATGGCTTCGTCTCTCAGGCTTTTGGTATCAGCAAG
CTCGCTAATTTTATCATTGCTCTTCATTGATGCAGAGATGTTAAACTCAACATTTGGTGT
ATTTATCTCCAAATTTTGGGGAGATGCTGTTTGGTTAACCAAATTTAAATTAGTTCCCGG
TGAAACTGACTTCCGAGTACGCTTTCTGGAGTAGCTTAAGATCGGTGTAGTCTTCGATGC
CGAATTGCCTGGTGATACCAAATTAGCCTTAAGCAAGGCTGCATTTCCTTTTATGTTTGC
TTGACCAACTTTGGCAGCAAGATCAGCTACAGGTCCATCATCCTTATGATCGACGTTTCC
ACTCAGACGTGACGAGTGCAATGCTTTCTTCAAGAGACTCTCTGCAGAAGATGTTAGTAA
ACTAACATTGTTGCCAGTGAACTGACAGGGATTGTCCAAATATTTTCCATCAATGTTGTG
TTTGTTGACTGCTGGAATAGGAGATACCATAGTTGCTTGATGTAGAAGATGATCAGCACA
ATCTGTGAGCCCATTTGTGTTGAGAATAGAAGCGGCAAGTGGCCTTTTATCACCATCTTT
GATTTCATCTCTGGTCTTGTGATCTCCAGGAGCCTCTTCATTGCTACTGGAGTTAATAGG
AGGATGGATAGAATCGTGTGCCTCAAGATCAGCAGAATTTGTCACACCATTTGTGTTATG
AGTGCTTTGTATGTCAGCTCTAACATCAAGGGGCCTTATGCATAGATCTTCACTGCCCTG
TTCTGGAGTGCCCAGGTGTCTTCCTGCAGTAATCTCGGTATTGCCAGGGGAGACAGTAAG
ACCATGAACAGATGAGGGGACATCAGGATCAACATGAGTTCCCATTCTGATCCCTGTAAC
AGACACACTTCCGGCAATGCTTCTGCTATGAGATAAACCTCTGCCAGCATCTTCTGCTTC
ATCTTCGGAGTCCTGAACTTGTACCTCCATCGTCTCTTGTTCCCATCCACTGCATAAATA
AGTGACCAAATCACTTGATTCAGTACCCATGAAGTGCATGATATACATTGCATATTCTTA
TGAGAAAATTAACAAGACATATAAACCCGATGGCTAAAATGAAAGGGTGGGAAATATCAA
AGATAATAGCAAGTTGGTTTGCTTCTACACTTACCTTCTGTTATAATTTTCAGTTGGAAG
AATTTCCCAGGCCTTTAAGCTGCAGTAAAATCATATCCGGTGTTTCAGCAGAAATAACCA
TGACATGACACGATAACTTATTTACAAGACTGGTTAGTAAATAAACATACCAATCTTCCA
ACCATTGGTGATTAACAAGATTGATATTCACCATTTTAGCAAGTTCATACTTCTCACCTG
ATAGAAATAGGGGTGAGAAAAACTGAGAGTGAACACTAACTGAAAAAGTGTAAACTGTAT
GGAAATTACGAAGAAAACAACATACCTTCAAATTTGTAGCAAATTAGATGGGTGATTTTG
TGTGCTATCAAAGGCTTGGAAAACTGTGCTCCCATTAAAGTAACCATTTTCTATATTCAG
TAGTGAAATAAATGGTCAGAAATATTTTTCCTCAAACACACATCGTTGTATGTTAGAAGA
CTAACACCTAAGAGGGCGTTAAGTACAAAACAAACCAGATGGTGCAAAAGCTCCAAACCA
AACAGCAATAGCCAAACTAAACTAACATAGCTAAAAACTGACAAATAAAACTAAGCTGCC
TAAGCAGCTACAGCTTTGGGATGAGAACTCCAAAAATAAAATGAAGCGTTCAAACCCAAG
TGTGAGAAACTACAAGTCCCTACAAGAAAAGAGCTGAAAATTTGTTAACTGCTACAGGTG
GATCTATGTCAGTAGCATTCTGAATCTTGGCTATGCAGAAGAAATGTTGGTTTCTAACAT
GTTTGGTATCCGTAAACTGATTCAGCAGTTTAAGTGTATATAATTAACTCCAAACTTGGC
ACAACAACAAAAAACAATTTGCTAGAATCAAAGGCATGACTATAAGCTATCCAAACAAGG
GACCAAAACTTAACCACCAAGTATCTTCAATCCATCCACTGAAGGAAATCATAACTGTCC
TGATCAATAACAAAATGATACTGACCAGATACTCTATGTTATTGGCTTTATGAATTAACA
ATCATAGACCTCTAGGCTTGGAGGTATAAAGGTAAAAGCAGCAGTATTACCATTATGTCT
TCACGCCCATTCTTTTGGTACCCTGTCAGGCAAATGTTAAGCGATTCACTGCCCGGTATA
CCATCCAGATCTCTCAATGGCTTGTATAGTACCTATCAAATCAAACGAAGTTCAAGTCAC
CAACTAACCACTCGCAGAAATAAGATCATTTCATAGGGGACAAACCAAAGGGTCCTCTCT
TAAGACAACTGTTTGGGGAACTTATTCAAAAGGCATGGTTTACACTGTACTGTCCATAAA
GAACAAATGTACCGGATTAATTGCAGTAGAGATGCAAGTACGATAGCGGAACTGACCCGG
TCGGTATCGGCGACCGCTCCGGCGTCCAGGCTATCGTCCACCCACAGCTCAGTTACGACC
TTCTTCCCGCCCTCCCGCGCCGCCACGCAAACTGGATCGTCCTACACAGATTTCAGTTCA
AGCAGAGACACCACTGAACTAAGTCACGCGAGAAACGCCCCCAACGAAACCCCCGGAGGA
GCAGGGGAAGCGGGAACTCACGTATACGAGGCCGAAGACGACCACGTGGGTGCACCCCGC
CGCGGCGTGCCCGCCGGCGTCGGCGCCGCCGCGCCGCACCATCTCCGACCGATACTGCCA
GACGCGGAGACATCACACGGTGAGAACTGGGCCGAATCGGGCCTAGCCAGCGCGGAACCG
AGATGAAAAAGGTGGGTCGTGGGAGTGGGAACCGCGTCGAGGCGGGCGGGCGCACCTGGG
ACTCGGAGGCGGGGTCGAAGCCGACGAGCGCGAAGCGCACGCCCGCGAAGAGGCGCTCGT
CGCCGTCGTGCGGGCGCATGGATGGGACAGGGTCCGGGGCGGGGGTAGGGTTAGAGGATT
TGGGATTGGTCCGTTGGTCGGCGCGCGAGGCTGGTTGGAATGGGGGGGGAGGGGGTGGAT
TTTGTTGCGTTTGGTCCGGGAGCGGAGGGAAAGTTGGAGATTGTAAAATTTGTAATTTGG
TTTTCCGCCGGGGACGCGCGGTTCCCAAACGGAATGGGTCAAAGCAAACCTGGCCAAACG
GGCCGGCAAGGGCCGGTCCAGGTTAAACAGGCCGAGCACGGTACGGCCCGACCAACGAAA
TCACTGGTTAGCGAGTATACCTTTCAACGATTATTTTCATCTTTTATAGGTTGTGACAAG
TGACGTACTGCATGCGTGTTATTTGTCATAACCAAAAAGTTTTCCCTTTTTCGTAGATTC
GTTTTTTAAAAATGTTTAATCTCCTAAACCGTGCGTCCAAATCTCGAACCGTTTTCACTG
TTGGCTTTCTCGCTTCGAGATCTTCAAAACTAGATCCCATGTTGATAGGGTTTAACGAAG
AAAAAAAAAATCACAAAAAACACCAAACGAAAAAACCATGCCTCACGCGATAGAAAAAAA
CAAAAAACATGTTTTTCCCCTTTCCGTAATGGGCCGGCCAGTGTAGAGATTCTTCATGAA
ATTTTTTGAAATCTGTGAACTTTTTTGAAAATAAATGATTTTTTTCTGTAAATTCGTGAA
CAATTTCTGAAAATTAATGGTAATTTAAAATTCATGAACTTTTTTCAAAATCACTTAAAT
GATCTTAAATATTTTATGAACTTTTTTCAAAATTCATGATTTTTTTTGAATTTTGTGAAC
TTTTTTTAAAATCCATGAACAAATTTCAAAAATTGGTGATGTACTTTTTTTGCAAATTTG
AACTTTTTAAAAATTTGTGAACCTTTTAAATTTTTAATAACCAACGGATTTTTACATGGG
CCGCCCATGAAGAGGAGCCCTGCAGGCGCCGGTTTTCCTAACCGGCGCTAAAGGCGCCGA
ATAGGAGCACCACTTCGCACAGACCAATCAGCAACGCAACAGGCCGGCCCGTTTAAGCAT
TCCAATGCTTCGATTTTGAGAACCTTCTAGAGGTTTTTCAGCCGGTTTTTTCTGGTTTTA
AAAAACTTCTAGGCACCTTGAACCGGTTATTCAGTTTTCATTTGGTCTTTCTTTTTTTCG
TTTTTCTATTTATTTTTTCTTTCTTTTTTCTTTTCTCTCTTGTTTTCTCTTCTTTTTTCA
TTTTCTTTTTATATCTTTTATTTTTGTCAAGTTTATTTTTAACAACTGTTTATAGTTTCA
AAATTTGTTCGTAATTCGAAAATGGTCATGGTTTCCAAATTTGTTCACAATTCAAAAAAT
GTTTATGATTTCAAAATTTGTTCATAATTTTATAATTTTTATTCATGAATTTGAACTGTG
TTAATGTTTCAAAATTTGTTCACAATTGAAAAATGTTCGTAGCTTCAAAATTTGTTCACA
ATTCAAAAATTGTTCATAATTTTGCTCACAAATTTGAAATTTGTGCATGTTTCAAAATTT
GTTCATAATTCGAAAAATGTTTATTGTTGCAAAGTTTGTTCACAATTCGAAAAATGTTCA
TAATTTTATATTTTTCCATGAATTTGAAATTTGTTCATGTTTAAAATTTGTTCACAATTT
TATAATTTTATATTTTTTGTTTTTGAACTCCGCCTATGTTGTCTCCACATAGCGGGTCCC
AAGTCCGGATAAAGGAGGAGGGTTGTGGTACGCTTGACGAGCCAACGTCAAAACCCAACC
ACTCTTATAGAGATGAAATGCAAAAGATTTTCATTGGGGCGTAATATCATGAGCGACGCG
CTACATCGGAACGTGGGTGTGGTGTCAAATGGGTAAGGGTCGGGCCATCACCCTCCAAGT
GGTGTGTCGTATCGTGATCTTGATAAAGTGGCAAGTGGGCGAGGATTGGGTCATCGTATC
CTTAGTGACGCGCTACATCGGCGCCCGGGTATAGTGGAAAATGAGCAAGGGTCTTCGCAT
TTGACTCGACGAGTGCGAAGGATAAGGAAGCTAGCCGAGTCTAGGAAGATTTGCTTAGGT
AGGTGGAACATAGGGTCTCTAACAAATAAGCTTCGGAAGGTAGTTGATACAGCGGTGAGA
AGAGATGTTGATATCCTTTGCGTCCAAGAGACCAAATGGAGGGGACAGAAGGCGAAGGAG
GTGGGGGTACCGACTTTAAGGTGTTGTACATGGGGACGGTTGCAAACAGAAATGGAGTAG
GCATCTGATGACTAGGTGATGTATATACTTATCGCCCCTCGTTGGACCTCAAGTGGAAGG
TGGAAATGTAGTCAGCAGCAAATTTCCCTCACACAGAGACTGAAAGGTTTATCAAATCCA
GGAGGACTCCTAGGCTCAACAAATAGATGTCTTCCACCCTGGCGCTAGC