Map Locations of contig_135596 (5447 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_135596

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4868 1 257 bp None Available Available None
MLOC_4867 1 1269 bp AK366048 Available Available None





CDS Structure of MLOC_4868






CDS Structure of MLOC_4867






Contig Sequence (5447 bp)

>contig_135596 5447 assembly3_WGSMorex_rbca.fasta
ATGACAATGCCAGGGCGAACTTCAATATTCTGGTTCACCCTGAGGACTCCCTGTAAATAA
GAATCAACATTCAGTTTATATTTACCGCAAGAAAAAGCCTTAACACTCATGAACTTATTC
TGTTCCAGGACTGAGATCTACATACCCTGAGGATACTTCCACCTGCTACCCCACCCCTAA
TTTCATCAACCTCTGAACCAGGCTTGTTGACATCAAAGGAGCGAATAACAATCATGTTGG
GAGGTGAAGTGAAGTTCCTTTCCGGAATGGGGATTTTCTTAATAATATATTCACAGATCA
CATCAATGTTGTACTTCAGCTGGGCAGATATTGGCACCACAGGAGCACCTTCAGCTATCG
TGCCCTGCACAGATGGTAGTAAAAAAGATCAAACCATGAAAGAGAAGACATGTATTTATA
ACACGAGCAATAACAAACAGTAGTGACCTGGATAAACTTTTGGATTGCTTCATGCTGGTT
CATTGCTGCACTTTCCTGGATAAGATCAATCTTATTCTGCAAAATAATGAGATGCTGGAG
ACGCATGATTTCAACAGCTGCAAGATGCTCAGACGTCTGGGGTTGTGGGCAGCTTTCATT
TGCTGCTATCAAAAGCAAGGCTCCATCCATGATAGCTGCTCCATTAAGCATTGTAGCCAT
GAGAATGTCGTGGCCCTGTTCAACAAGATAGATATTGTAAATACATATAACATTTACGTA
ATATCATATTCAAGTTCAACTAACGAAAATAATATCTAATGACCCATGGGAGAACTCTGA
TGACTTCCCAATTCATACAACAATTCAGCTGAATAATCGGAGAGACAATTATTAGTGTAA
ATAGCCATTATCATCTATGGTGATGCGAGAGAAACCCCAGGATCATAATTGACAGCAAAT
TAAACTGTAGGGTGCAAAACGTTACTACCTCTGTACCAAAATATAAGATGTTTTTGCAGT
TTAATTTAAACTGTAAAACGTTTTATATTTTGGTACGGAGGGAGTACTAATCACTTGGAT
AGGGCAAGAAATGGTCAGGCTATGTACTTAAGCATTCATGTACTAGATCTGTATAAGGGG
ACATTCATAACAGCAAAAGGGTAGAGCTTCGTCATACCGGGCAATCAACAAAGGAAACAT
GTCTCAGGAGCTTCATCCTAGTGTTTTCAAACCCAGGAACATCACAGGCAGGAGTATCTT
CTTTTCCGCTTCCATAAGCCCTTCATATAATTGAATTAAAGTCAAATACAAGAGCTTAAA
GGCTTGTAAATAATCATACATTAAATAATTTCTGAAGATCAAGTTTGAGATTTCAATCAT
GAGTTCTACCTTGTATTCACTAGAAAATAATCATGTGAACATACAAGTTTAATAATTTAT
AGGAGTATAGAACAGTGCCCCCTGAAGTTCTTTGCTCTAAATTGCAAAGAGGCTGATAGT
CATAGAAGCTAATGATGTAAAAAAGATAAGAAATTTAGCATACTTGTAACACATTGGTCG
TGGGCATCTGTCATCCTCACATTTGTAGATTTTTGCATTAGCGTAGCCCAGCTTGATAGT
GATGTTACGTTCAAGCTCATTCTTGAAGCGAACAGTCTATAAATAACAAAGAAATCAGAA
AATAATTAATAGTACTAAAGAAATTCCATATGAACAGAATGTGCACATCAATGTCCATTA
GTTACTAAATCATTCTAGAAATTATTGTAAAAAAACAAGGCAAAGAAGCATGAACTACAG
CAGTGCCACTACCTGAGCCGAGAAACTAGAGCACTTGCATTTTTAATACTCCCTCCATTT
TTGTATACAAGGCCACTATCAAAATTACTATTTGCAACTATACAAGGCCACTAACACCAA
TCGAAGTAAAATTAGTGAGGTTTGCCTCATACTAGCAACTGAGAATATTAATAAACCTTG
GATGCATGTAGAAGTGAGAAGGTTGGTTTGCATGCACGGCATTAATCAAACAACGAGGAG
TGAGAGAGTTGTCTAGTTTTGCGTTGGAGAGAAAAACACACATTAATTAACACCGAAAGC
AACTAGCTTGCAACATTAGCTTAAGTAGCCATTAATTCCTACCTTGGTACCTGTAATATG
AGTTTGTGGCCTTGTATACAAAAATGGAGGGAGTACTACTAATATCAAATGAATTCCTAG
ACCAAACTTTTATCAATCAGGTTTGGAGAAATCTGCAGTGCATTCCTGCTAGTGCTATGT
GTGGTTTACTCGTTTAAATACCAAAAAGTAATATAAGCATGACATATTTGAGTAATATGG
CAAACTCAGAAGAGTACTGATAAATGTGATAAGTATTTAACAGGCGTATGCATACTGGAA
AGAAAACATGGCTACAAAATGAATGATACCTGAACTCCGGATATAGCTTTCACAACAGTA
GACTTTCCATGTGCCACGTGACCAATTGTACCTGAGGGGTAACATAAATATCGCAAATAT
TATGTCTCCGCATAGAGTAAAAAATAGAGATAAAAAAACAAGAGCAAGTAATGGTTCACA
ACTCAAAACTGCAAACAAGATAACTTGTTATACCTAATGGAAACTTTGCTCCATCAAAGC
TCCCTGGCGTTAAGAGTTCCAATGGCATTTTCCAAAAATGTGTATTTTGCAGAGATATTT
AATTATTCTTAAATAAAAGAAGCGCCATGTCATCACTCAAGGCAACAAATGCTCCATCAC
ATTATCATAAAACAAATCATATTGCTTTCCCCATGCAGTCACAAAAGGATTAACCACAAC
AAAAAGCAACAGGTCAGACTTCAGTATGGTGGTCAAAGCTTAAACAGGTGCATAAAGAGA
ATAGACAATGGTTCCGACATGTAACTACCTATGTATCAGAGGAAAGATCCAACATGTAAC
TATCTAGGTATCAGAAAAATAAGGAACATCATGCAAAAGAAACTCCACTGCGAATAATAT
ATGTAAAATAAGCATCACCAGCAAACATATGACGGTAAATAGGAGCCATTCCACAGTGAA
TTGCATCACACTAAAAGTTGAGAGCTCATTAGCTAACGAGGGACAATCCACATAGCTTGT
AATGTTGTACACCTATAAAATTCTCCACACTGATAATTACTCCCTCCGTTCCTAAATATA
AGTTTTTTCAGAGATTCCACTACAGACTACACACGGAGCAAAATGAGTGAATCCACACTC
TAAAGTATGTCTATACACATCCGTATATAGTCCCTAGTGGAATCTCTAAAAGGACATATA
TTTAGGAATGGAGGAAGTACTTGACATTAAACATCGCCAAAAGGATAGTAACAGTACCAA
TGTTGATCGTAGCTTGGCGCGAGATAACTTCGGGTGACAACGGGTGGAGCTTGGTGACAT
CAAGCTTGGTTAGGTCCTGCTCCATCAATCCTCGGCGTGCCATGATTGAAACTGAAAAAA
AAACGATGCACAGGGTTATCGCCTCTACTCCTGTTCACTGACTCAAAAGACCAACTGCAT
GGAAATAGAACACGTGCTACCTCCACCTACGATGGCCATCTTAAGCTACCGTGAGAAGAG
GGGTTTCTACTTTCGATGCAACAGCGAGGGCACCTACGCAGTCGGAACTGTGACAATACA
CTGATCCAAGAGGACAACCAGAGCCTAAAATCTGCCGAATTCTTCACTCTACATCGTCCA
GCCTAGGACTCCAAAACGAATTGCTAATCCGAGGTCACAGCAGCCACTGTACACGACGTA
GAAAGCACATCAAGCAGCCGAACTGGTAGCAGCGGCAGCAAATTCACACTAGCAGCAGCA
TTTTACTTTGACAGTGCCAACAAATTCGCACTGAGCACTGACAGTAGCATACACAATTAT
TCCACTCGCAGCCACCGATCGAAACTAGCGAATCACACTAGAGCAATAGAGGACACAGAG
AGATGAGGAGAGGAGTGGAGGCGAGACGAGAAGAGAGAGCAGAGGAGCTCACCGGCGTGC
GGAGGGGAGCGCGGGGCTGGGTTGGGGGACGGCGGCGTCCGGCGGTGAGGGACGAGGCGG
GGTCGGGGTCGGGGTCGGGGTCGGGGTCGGGCTCGAGCGGCGAGGGGTGTGGGGGCGGAG
TTGGAGGAGACAGCCGGCGGCGCCCTTGGGTGGGGTGGGGGAAAACCTAAACGAGAGAGC
GAGCGCGAGAGAGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGGATGATGCGAGTTTCGGC
TCGGTGGCAAGCTCGTCGTAATTATGTGTTTGGATAGGGGCGGAGTCATCACACGAAACG
TTTTTTTGCTTGCTCAGCTAACGGGCCGGCTACGCTACGAGCAATTTGATTTTTGTTACA
GCTCGCTTGGCTCCTCTGATTTCATTTCATTTGGCTGAAATGAAATGAAGTGAAATCCCA
AATCCAAATTTCATGTTTGGTCGTCACTAGGATTTTGAGGTCAAATTTCATTTCATTTGG
CTGAAATGAAATGAAGTGAAATCCCAAATTCAAATTTCATGTTTGGTCGTCACTATGATT
TTGAGGTCAAATATGTAGCAGGACCAAAACCAACATGAAACCGTACCGACGCCATCATCG
ACAACTTGTTTTTCACACATAGCAATGTTTTGCATGAAACCGAACCATGCCGACACATAG
AACTTCAACATGAGACTTTGTAAGAATTTAACCAGACTTGTAAGAAAGTTAATCTTTGCA
ATACAACAAACGTTCACAACAACATCAAATGATCATAATCTAGCCAAGGTTACATAAAAA
CTGAATCTTTGCATTATTAGCACCACCCAAGAAAGATTTTCATTGCTCGAGGGTCTTCAT
TTTTTTGTTTTGTTCGTTCAACATCACACTTCATCCACTATTTGATGCCAGTCTAGAAGG
CAAATCAAAGTGTCACACGATAAGCTTTAACTTGCAGCAATCTTTACGAAGGGTAAAAAG
AGTCAACTTGATATAGAAATTGCTCAAAGGATAACTTGCACTTCATTTGCACAATTATCT
TGAATCAAAAGGTAACAGCGAAATACCATCAACACTCGAGAAAGTTAACTAGACTGAAAC
TAAGTCGATAAGAGACTCCATATTAAAACAGATATCTAGTTGATATATTCTAGACTATTA
ATGCACTTCTTGACTGAAGAGAAAAAAGACATGGCAGAACAAGTTGTTGCCTCTCCTAAC
TGATCACGGAACAAGCAACATACCTTCATTGGTTGTTTTGCTTGAGGATCCATTTCTTCT
TCATCCTTTCAGGCAACACCATAAGAGCCTTGAACTTGTGGTCATCTGCTATGAGGATAT
CATAAGCTTCTAGTAAGGCATCATCATCCAGTCCCGTAATGGCATTGAGAGTAGAAGGAT
TTCTTCAGGATATGAGGGTTTCGCTGTTGGGAAACGTTGCATGGGANNNNNAAAAAATTC
TACGCACACGCAAGACCTATCCTTGGCGATGATCATCTACGAGAGGG