| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_135588
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4860 |
1 |
1778 bp |
MLOC_4860.1 |
Available |
Available |
LOC_Os02g49420.1, FRAME:+3, EVALUE:2e-22, 13102.m05603 protein fasciclin-like arabinogalactan precursor protein, putative, expressed |
CDS Structure of MLOC_4860
Contig Sequence (5041 bp)
>contig_135588 5041 assembly3_WGSMorex_rbca.fasta
CTAGGGCATAATTCCAACAACTAGGTCATTCGAGGCGTCTAGAGAGTTCTAGGCTGCTAA
CCGCCTCCATGGATTGTCTCTAATGCCCTTATCTATACTAGTGTGCACAACTAGGATACC
GGTCAAGAAGTTACATTATAAAAGAGTAGTTGAGACCGTGTAGAGTAGTGGTATAGTGCC
CGTGGGGATGATTTTCGTGCTTTTGCCAGCCCCAGTGCACCACTACATCCGAGGGAGCAA
AACTACGTCCCCTCCCTAGCCGGACACAAGGGTACCAACGCTGCAAGCCTATGTCGAGAA
CTAGTAAATAAAAAATATGGATTGTTGTGGGAAACACTAGGCCCAACAGGACACGGGAAC
CTTCACAGACAATCAGACCACACCGCTACCACCAGCCTATCAACCGGACCAAGCAAAACC
CCACACCCATCTCAACAAACCAACACCTCAAGGGGGTGAGGCATAGATACCCACAACACC
ATTGTCGCCCAATCTAGGAGTGGATTTGGTTTTTCCTCTCGGACATGAGAAGACGAGGGA
AGGGGAGGAAGTAATACCTCGACGTCGCCAAGTAGGCGACGACACCCATGACTATTGTCA
TGGTCGAGCTAACACTGCCAACCGAGGATTTCTTCTAGTCTCCACCGCCACCTTCACCAC
CCCGACAAGCCTAGAGCCGACGGATGAAGACCACAATGTCTAGATCTGGCAAGACTGAGG
CCGCTTGAGAGGTTCAAGACCCGAGGCCCTTGAGATCTGGTGTGAGTACCACCCGCAGCA
CACGCTCTAGGCCATCACTCTCAAATCGCACAAGGGAACGACCATCACCATCGAGCGTCA
CTTGTCTTGGAGGGGTGTCTCCTTCTCCACCCGAGGCAGACACTTTGTCTCTTGAACCCA
ACACTAGAGGGCCAAGGGGAAAAATATCATGAGCTCCAACCCTCAAGTGCTCTCGTTATA
CGAGTACCCGCGGGCTGTTGGATCTGAGATCCAAGGGTCACCACCCGAACTGTCGGACTT
GCACAATATTATCTGCCTCTCGAAGGGATTTTTGTGATTTTGCCAAAGCTCGACCATTGG
ATCTCAAATCCAGCGGTCCACGATACTTATATTACGGGAGCACTTTAAAGGCTAGAGTAC
CCGATATATACTCGAAAAAAGAACAATGAGAATCCCACTACCACCATTATCGACGGCCAT
ACGGTTTCCCTAAAGCCTCTTGTGATGGCTACGAGAGATATGGACGAATGGCAGGGCACA
TCGGCGGCTAGGGTTTGGCTGCCGCCCGAGTTGTCCACCATGATGGTCACCAAAAGATAG
TGTGGTTGGTGCTTCACAGTTAAGAGAGAGATAAGACGATATATGCACAATTCTCAAACG
AAGAGTTTGCCGAAATAAGACGATATAAGTAGGAGCGAAGGAACCCCAACCAGCATGACC
AACGTATAGGCACACAGTAGAGCCCCGCGAAGTTTCCCGGAAAGAGCCGCTGTTACCACT
TCGCCACAGAGTCTTAATGGAGGCCGTGTACATATGTTTCCGTTTCCTTTTTCCTGTGAG
ACTCTATCATGTACATATGTTACCACCGGCCAAACATTTCCAGCTAGCAGCGTGAAAGCA
TTCCCCAGTAGGCATGCACGCAGTAGACGCCTCGCCACACACACATTTTGGAGCCACGTG
ATAAAGGGAACCATTTATGTAGTCCGACCACAAGAAGCAGAGACGGTAGCGGAGGACAGG
CGATGGCACGCCACCGATTCAGCATACAAACAAAGCCCATTACTACCACGCACCTCTCCC
CTCTCGTCATCTCCCATTTCTACCTCGGCCGCCATTGAAGCATGCACCGTCAAGCTTTTC
TCTCCAGCTGTCTCCACTGTCAAAGAGGCAAAGAACGGGACGTGCCACCAGCTAAGCAGC
GCGCAAATAGCATCCGATCACAAATTGCATGCATTGATTCACCCCCCACTCGAAAAAATA
TAGCATTAAACTCATTGTCGCAGTAATATTATTAAGCATTTCCATATCCTGCTGCATGTA
TGCATGCATGCACACCAACCCCTCGCAGCGCGCGTGTGTATCTCCATGTACAGTGAAGGG
TGTGTGCGCGTCTGACGACGTATATTCCCACCTCGTACGCATCTCGCACGGTGGTTTTGG
GTCCGGCCGGACCACGTGAGGCTCACGCGGCGCTCATCGTATATGTAGGGGCCTGGCCTA
AACCCTTCTCCCTCCTCTCCAGACACCAGCCCGCCCAGCACCATGGCGATGGCGTCCACC
GGAGCCGTCCCCTGCTCGGTCCTCCTGCTGCTCCTCCTCTGCGCGTCCCCGCTCTGCCAG
GTCGAGGGCGGGCGGCACAACATCACGGACATCCTCGCCGCCGCCAGCCCGGACTTCGCC
CAGTTCAGCGCCGCCCTGGCCGCCGCGAACCTCAGCGCCGAGATCGACGGGCGCAGCCCC
GTCACCGTCCTCGCCGTCGACAACGCCGCTGTGGCGCGGCTCGCGGCGCGGGGGCTCCAG
CCGGACGCCGTCGCGCGCGTGCTCTCCCTGCACGTCCTCCTCGACTACATCAGCGACGCC
AAGCTCCGCACCCTCCGCGGCGGGTTCACGCAGGCCGCTAGCCTCTACCAGGCCGGCGGC
CGCGCGCCGGGGGCCGCCGGCATCGTGGACATCAAGCGCGGCGCGGACGGGCACGTGTCG
TTCCGCCCGGCGGAGGGGGTGAACGGGACCGCCGCCGTGTTCTACGTGAAGCCGGTCAAG
GAGTCGCCCTGGGACATCGTCGTGCTGCAGGTAAGCGACGCCATCTCGTCCTCCGCCGCC
GAGGCCAAGGCCCCCGCGCCGCCGGCCCCCGCTCCTGCCCCCAAGGCGCCCGCGCCTGCT
CCTCGCGCGCCAGTCGCGGCGCCCGCACCTGCTACGGCACCGGCACCGGCCCCGGCGGCC
CTGCCTCCGTCGCCAAAGAACCACACCGCGCCACCGCCGAAGCCGGCCGGCGAGCCCGTG
CGTGCGCCAACACCCGTGGTGGAGACGCCGGCGGAAGAACCATGGGGGGAAGAGGAGCAG
CCCCCTGCCGACGCGCACAAGAGCGGCGCCAGCGACTCGGAGCCGTGGAGCCTCGGCGCG
GTGGTGGCGGTGGCCGTGCCGGTCGTGGTGTTTCTGCTGTGGTGAGCAGTCTGTGCTTGG
AATGAATGCCCGCTGTTAGTGGCGCTGGATCCCGTGATTAGTGCTCGCGCTTACCAGGAT
GGAAACAGTGGTTAATGAGCGTGTTGTACGACGATGCTCATGTTTAGTCAAGGAGTGCAT
GGCTGTGTTTGAATTGCTACTAGTAGTAGTAGTACTCGCGTTTAGCCAATTGATTGAGTA
ATTTATTTCTCCTTTGCATGGACCAAGCTCTAGATTTTCGGATGAATTACAAGATGAATC
GAGCAGATTCTGATGAACCTTGCAAATCCGCCTTTGTAAACCAAAGGAAGAAACCCCATG
TTGCAATGGCGTCTATGGACAAAATTCAAATCTCACCCACTCTGCACGATCACATATGGA
AACTGATCGATCCAACAGCACTAATTCATCACATACGAAATGTTTCGACTTTCTACCATG
CTTTGATGGAAACGATATATAAGAACGCTCGCTGTGAGTGGCTTAACAAGCTAACGATCC
GTGATGTATCCGGTACTGCATGCGAATCTCAACGCGACGACGCGTGGAAATGATTGTGGG
CGAATTGTTCGCTCCAACACACCCATGAGCGAATCGTTCGCTCCCACGTGGTAATATGAG
GGAACTCACACATGCACTCAACGCAAACTGTATCTGATTGCGGAAAGGGCACTGATATGT
GCGGGCGGGTCGATCCAAATTTTCGTCCGGTCGCGCGTGAGCCGTCGGATAGAACCATGT
TGACCGTCAGATTGAGTCATACAACAAAAATCGTTGATGTCAGGAAAAACAAACAGCGAT
GTAGCAAATTTCAACCACAAATACAGCAAAATCATCATTGTCGTCGTCGCGAGGTCGCAA
CACCATCTTGATGGATGTAAAACAAATTGCCGGTAGTAGCAAAATGCAAATACGGTTGCA
ACAAAAAATTGGCGCAGCCGTCGCTAGGTCGTAGGTCCACTTTGATGGACGTAGCAAAAA
AGTTAGCCGATAGTAGCAAAATGCAACTACGATTACAGCTTTCCTTGCTGACGAGAGCCG
ATTGAAGCTTTTTCTGTCTATGATTAAAGTTTTTTTTAATAATGTTTGAAGCTTTTTTAA
TAACGGTTGCAATACTTGTATACGCACGAGCCCCAATATGACAGCAGGCAACGAGGACGA
CGGGCGAAGGCTGGAACCAGCGGATCAGACGGACAACGAGGGCGGGCACCAGCGATGCAG
GCGGTCGACGGGGGCAGACGCCAGCAATGCGGACGGTAGCAGCGCAGGGGCACCAGCAAC
GCAGGGGAATGGGTCTTCAGATCCAAAAGGGTCGCATGGGTCGCACGCGAGCAGCCCGAA
CGTTCGACCGACACACCGGTTGTAAACATTTCCCTTGCGGTAAACAAATAAACAAACTGG
GAATGAAATTTCATTTGATCCGATTCAAAAACTCACGAAAGTGTTAAATAAGGAACTGAG
AACATTAATCCATTCGCCCATAATTCCATCCAAATTCATTACATAGTAAGACGGTAATAT
AAAAATTTAGTGTCATCATACATTTCCTCATCGCCAGTGCAACTGGAGCGGTTGCTGGCC
GGTCAATGCGGCGACGCGGTCCAGACGGCTCTTGTTCTCATCGAGCGGCGGCCAGGCGCA
GAACTCCGACAGGCCCCTAAGCTTTTAGGCTGGTTGTAATGGATAATATTATATACTAGT
ATCATACATATGATATTAGTGCATTAAACAAAATCCATAATGCATAGTATCATACTCCCT
CCTTTCTGGTTTATAGGGCTCAAATCTGAAATCTCATCAACCAAGGTGAATTGTAAGTGG
ATGACACTAGTTTAAAATAGCCAATGAAATATTTTTCACATATGCAATTTTCAAGGCAAT
A
