| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_135540
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4819 |
1 |
1161 bp |
AK363314 |
Not available |
Available |
None |
CDS Structure of MLOC_4819
Contig Sequence (8413 bp)
>contig_135540 8413 assembly3_WGSMorex_rbca.fasta
TGTATAGCAGGTGCTTGCGCGCGGCGGACGGGGTGCAACACCCTGTGGGGTCCGGCGTGG
GCGTGCCCGCGCGCGAGCGGCGCCGCGGCGCTGCTCCGGTCCGCGCACCCTGGATGGTCG
CCGGCGGTGATCCGCTCGGCGCTGATGACCACGGCCATCGTGACCGACAACCGCGGCGGC
GCCGTGGCGGACGAGGCCGAGCCCGGGCGCGCCGCGACGCCGCTCGACTACGGCGCGGGG
CACATCGCGCTGGGCAAGGCCCTGGACCCGGGGCTGGTGTACGACATCGGGGACGAGGAC
TACGTGGCGTTCATGTGCAGCATCGGGTACGCGGCCAACGCGATCGAGGTGATCACGCAC
AAGCCCGTGTCGTGCCCCGCCGCGACGAGCAGGAAGCCCTCAGGGTCCGACCTGAACTAC
CCGTCAATCTCGGTGGTGCTCTACGGCAACAACCAGTCGAAGACGGTGATCCGCACGGCG
ACCAATGTCGGCGCCGAGGCGTCCGCGACGTACAAGGCGCGCGTGGAGATGGCGAGCGGC
GGCGCGTCCGTGGCGGTGAAGCCGGAGAAGCTCGTATTCTCCCCGTCCGTGAAGAAGCAG
AGCTTCGCGGTGACGGTGTCGGCGGCGTCCGCTCCCTCTACGGCGGCGCCGGTGCACGGG
CACCTCGTCTGGTCAGACGGCCGCGGGCACGACGTCCGGAGCCCCATCGTGGTGACGTGG
CTGCAGCCCATGTGATTGACAAGTGCCCAGAGCGGTTGGCGATAAGGCAGTGGCGAGTGA
GCAGAAGTCAGAGAGAGTTGGACTGCGGTGGTAACGGTTGCGGTCGGGGGCGCTGCGCAT
TGAAGGTGGCAGGCCGCAGTAGTTTAATTACGTAGGGCCTTTTTCTCTGCTGAGATCGAT
TAAAGCGCAGGCAGTGAGACAGTAGTCCTATATAGAGTACAGTGACAGCAGTTTGTTTGC
TTTCGCGGGCAACGCCAGTTGCCGCGGGAGCAACGGAAAGAAAGGTCCAAACATGACAAA
AGCGGAGAAACTCTAGTAGTATTACTGTAGTAGTTCCAGTGTAACTTTTGTGTAGCTGCT
GCATTCTCTTCAACTAAATCTAATGTAAACTTTTGTCTGTTTATGGAGCCATGCCATTTT
GTACGGGCCTGCCCATGAGATCTTGCCTCTGTGTACCGCCGAATTTCCAGATGGATGGGC
ACAAAACCTCTTGAGCAGCTGCAAGTTTTTATAATTGTACAGAAAGATGATAAAGTTCGT
TGGATGCTCGGTATCCGGTGCCTTTTGGGTCGTTTTCCACGGGCACTCACTTTGCCCGGC
AGCGCCAGCAACGAGGAAAGCGAGGGCTGATGCTTCTCGAGTTCCGCGGGTACTCGAATA
AGCAAATGCCATCATTCTTGGACTGGCTTTCATCCACAACGTGAACACACCTGGTAGAAT
CGTCCATCTTCTCCGGTCGACCGGGGTGCGTCTTGACGAGGACTTCCATCCTGCGATGCA
GGTCTCCACTTACATAAAGATATGCGGCTACACAAGATATCACTAGTCCAAATCGTTCTT
TTCTTTTACCCGAAGGCAATGCGTTATCTTGTGTGCTTTAAACATAAGTTGCTGCTCGTA
GTGGCGAAGCCTTTTGCCCCAACAGCACTTTGCGGATGGTGTTCATGCTCTCCTCGCGGG
TATGGTGCTTCGTGGTCGTGATATCGTTGAGTCTGCGCGGATCGGCGTCGGTGACTGATG
TCGGGTTAAAAGTAGATGGGGTATCGTCGTTCTTACCATCGTGGTTGAGTGTATTTTGAT
GTGAGTGACACATGATGCGTTGCGACAGGAATGGGGACGGCAGTACACATGGGTTGCTCT
CTTACGAGCATAATCACGCAGGTGGTGGGTCTCCTTCAAGGTTGTGTGGGCAAGGGAAGT
TGCTGCAGCGACTGGATTGAACGTGCCATCTCTCGTATGGAGGAAGCGTTTTATATTTAG
ATATGAGAATCTAACATCACCGTGTCCATCCTCGCGGCCTCATGGTGGCACGAAGGAGTT
GTCGAGCGAAAGCTCCGTGCCTTGATGCTAACGACGTGTCACTCGTGGGTGTCACGCTTT
TTTTGAAGACGTCGTCATGGTTCTTCTCTTCATGTCATGGATCAAGGTGAAGACCATTGT
CCGGTGAACTTGACAACAGCAACGCTCTGCGTAATTCTCCCTCTTGGTGACATTGTCGTG
GAGCTTAGATGTTCTAGCTTGTAGCATCAAGTGTATTTAGATTTTCATGTGCTTTTTGCT
GGTGTGTTCTGCGTGATCAGATATCATAGGATCGGCTTTGTAAGAAGACTACTTCATCAT
TTTGTATCTTTTGATTGTGTTTTTTTTTTGCTTTATAAATAAAGCGGGACGAAAGTTTAT
TTCAAGGAGATGTGGCAACTTCAAATAACTAGTCTTTGCTTTTATGCAACGAAAGCCTTT
AAGTTTCCTCGCCAAGAAAACCTAAGAGCAACGGAGATGGTAGCTATCACTAGCGCTTTT
TTTTTACCGTTGTGGCACCGGATGGCGACTCTACTAGAGTGTTTTTTATATAGAATCTTC
ATATTGATGGTTATTGTGACAATTTGACCATTATGTCGACTCTTCTATGAGTTGTTATAA
GAAAGGAAGCGTGTGGAATCCACCATAGAAATTTTAGATACTCGTCTATAGTTTCTCAAG
TTCATCCGTTCCAAAAAATGTAAGAATATGAAAAATGTATGATTAAACTGCCATGCTATG
TAAAATTTTATGTGAATTGAAATCCCAAGTTCATATTTTTTTTAAATGGGCTCTATCCCA
GCTTTGTAAATATAGTCATGTGGCCGAACGATACATTGTGTTGAGGAGAACCTCATAAAA
ATAATTAAGAAAATAACTAAAAAAAGAACACGCTAATAAGCACATAACTGCATAACTAGA
CGCCTCCTGAACACCATTGAGAAAAGTACATAAGAGAACCTGAATGTGCCATCGTAGCCT
CGGAGCACCTGTAGTGAACAATGATACGTGCAAGAGGAAAATAACACACAACGCCCATCA
CTCGTTCCATCGAAAAAGGAAAGTGCATCTAGTGCCTTCTTAGGGTTTTGGATGATTAAT
GACAAACGAGTGAAGTGACTAAAGCTCTCGGCCTAGGAGACTTAGCGATGACACAATCTA
AAGCTCGTTTTTGGGACTCGTGTTGTTCGTGCGAACGGTTGGCACACAACGTTCTAGAAT
GACATGGCTCAAAGATAGATACGTGAATATTCAACTCTCCAAGCTATAAACAATGGCATG
CATTGTTGAGGAAATCGTTAACTCGTAGCTCCTCACTTTGTTGGCGGGTAGGACATTAAT
AGAACAATCGGTAAGTTAATCAACCATTTAATCAATTACTCGGTTGATTTATCAGTTAAT
CGACTACTTGGTGACCCTATGAGTGGGATTAATTGGCAAGTTAAATCGTGAATTGGACGT
CTTGAACAAGGGTGGCATGTAATCTAAAAAATTCAACCCCACTATTAAATTCAATGGAGA
GATCATTTTTGATCGGAGGAGACAAGGGAGGCTTTCTCTGAAGCTTTGGTTCTTTGTTGG
GACGAATTCACAATAGAGACTACACGATGGACGTTGATTATCAAGACATGAAAGGTGTTG
ATCTTCACGAGGTAAATGTCATTTTTGCAGAGGATGAAGTGTGAACTGCTATTCAAGGAC
ATGTCGCCACATCATGTGCATGTATTTATGGGTATCTTCTATCAACGTGTTTGGGGCATC
ATCAAGCAAGATATCATGGTTGCCCTCCACAATCTATACACTATCGATGGTTGTGGGTTC
AATGCATTGAACAAAGACCTTATCACTTTGATTCCCAAGAGGCATGATGCCAAAAAAATC
GGCCACTTCATGCCAATAAACCTTGTGCATAGGTTTCCCAAGCTATTCGCTGAACTATTG
GCATTTAGAGCTTGTGCTAGGATGAATGGTACTGCCATAGCAAATCAATTCGCCTTATTG
ACGCATAGAAACCTTCGTGAAAATTTTCTATTGGTCCAACGGATAGCGAGGTACCTACAT
GCTCACAAATGCAAGGCCATCCTTCTGAAGCTTGACATATCTCGTGCTTTTAACTCGATC
TCTTGGCCATTTCTTCATCACAACCATTTCATTAAATTATCGTCATCATTGCATTTCACT
TGCAGAACTGAATGATGTGAAAATAATAATAGTGCAATAGTGTCATGGACTAAGTAGAAA
TCTACAAACACTTTAAACAAGGAGAGAACAAGGAAATATTTGGCCTTTCGTTAGATAAAC
AATAGTGCATATAAGAGGCACTCGACAATTCTTACGGAGTCCTCTCCTTACAATGACTCA
AGAAAAGAAAAGAAATTCATAGAAACACGTTAGAATATTTTTGGAGTTTTTATTTTACTG
AGGAAGGCAAAGCAAAGAAAGGAAACGGAAAGCGAAAAAAACTATTTACACCAAGTAGCT
CTCAACAAACAAAAGAAGAACAAGAAATCTTTTTGGATTTTCTTTTACTACTACGAATTA
AAGAAAGAGAAGCCGAAAAGAAACTAGAAATATTTTTTTGTATTTTCAAAGTTTTCAAGC
ACACAAAAAGAAATGCAGAAAAGCAAAAGCGAATAAACAAAGGAAATGAAGAATACCGAT
AAATGAAAGAAATTTGTGAACATGAATGTAATGTTGGTGAGAACACGTACCCCCAAGCTT
AAGCTTTTGTCCTAACTTGGTTTACATCCACTGGTAGAATCCATTTGGTCCAGGAAAGAA
CTGGGGCTCCTGAGGTACCTGAGCCTCCCAAGGATGGAGTTGTGGTGGTGCATCTATCTG
GTCCCAATATGCATATATATCATCGGGCTTGATAGTGTACGTGCCCGTGGACAGATCAAA
CAAAGCACATGCAGGCAAAGTAATAACCTTCTTGGTATCCTGGCTAAACATCCAATTCTA
CCGAAAACTAGCCTCACCCTTGCTAATGAAATCATGCTCAACCATACTTCATAATCTAAG
TAACTTATAAATAGAAGCTTTTCCTCTTGATATATGATAGGTACCTCAAAGTGTTTAGCA
ATACGAGTAGCATAAATACCACCGTTACTTCGGTTAGTATGTAGGTGACGGGCAACAATA
ACTCCCGGAGTAAAGGTCACATCACCATGAAGTGCAGAGCACAAAATAGCAAGATCAGGT
GAACTAAGTGTTCCACTCTCCCATCTACTAGCCAAACATCTCTCCACAAATAAAGCAAAA
TAGCACAATGTAGGGAAATGTAAACTAGTAACTCTGTCTTTACAAACCCCTATATTCTCT
TCCACGGTTACTTCATGCACAAAATCCTGAAAACCTCTAGTGTGTGGCTCTAGTTTCTTA
CTTCATGCACAAAATCCTGAAAACCTCTAATGTGTGGCTCTAGTTTCCTATCTGAAGGTG
TCCTGGACTAGGGGATCCCGCCCTAGCTGACCTAGTCCGTGGGTCGGCCTAGCGGCCCAC
TACTGAAGGAAGGACTCCAGAGGCCCCTAAACTATGGCGTAAGAACATCAGACTTCTCCA
AGGACTTGGCGTGCACACCGAGAAGGTTCGATAGATTCGGCATGTATTCCATAGATGTCA
ACTGACCATGTGTCACTACTAGGAAATATCTTATAGGTAGAACCTTAACAGTAGTGTGGG
GTTGTTGGCCATCGTTACTAGTACTTAGCAGTAGCGATGGGCCTAATCCAGTGCTACATG
TAAGTCTATAGCAGTAGCGTGGATCTTCGACTCAACACCATTGCTAAGTGGTCCCCATGT
GGCCCACCGGGTCAGCCCGTAGTAGCAGCATTTGCCAAAAACCATCGCTACTACTAAGCT
TATAGAAGTAGTGGTGGTCCGCGGTGCACCGCTACCACTATTTGTGCATGGTGTCAACAA
GTGGGCCCGACTTAGCAGTAACGCGTGTCGCCTGCCCAGTGGTACTGCTACATCCTTTAG
TAGTAGCATTCTCCCTTAACCAACATTGTTTCTAGTCACAACTACCACCTTTTCTCACAC
CCTCCCCCTCCCCCTTTCCCCTCCCTCCACTACCTCCCTCACTTGTTCTTCCCCATTATT
TCTCCTCCTTCTTTCACCTCTCTTCTCTCCCCATTAATGCCCCCTACACCATCTCCTCCA
TTAATGGCCTCTTCCTCACTTCCATATATACACCCCTTTCCCCACTCCTACCCTTTGTGT
CACTATCTAGCTCTCTATCCCTCTCCACTAGTTATGTAGAGCATCTCCTCCCAACTAGAT
CTACCCATTTTAGACGTAAGTCATCTTTGTCCACTTTCGACCCCTCGTTATATATAAGTA
GTGACACCAGTCTCATTACCGTGTGTCTGATCTCTCTCGAGATAGGAAGGTGCGTAAGAA
GTCGTGCTTTGCAAGAATGGAAATATGTGTGTTTGCGCTATGATGGAAACTGTGCGTATG
GCCTGAGAGTTGCCTCCTATGTGTATTTGTAGAATTGTGCGTGACATGAGTTCTTTATTT
TTTGACGAAATTTCAATTTATTTCCTTTTTGACGAATTTTGGGAAAACTCTACATGTCCT
ATTTTTAGCGAAGGTCGTGCCAAATTTTTGTATGCCTTTGATGCATGCATATGCATGCAT
GGTAATAATCCTTTTGCTTATTATACTGCGCATGCGATCATGAAGGTCAGTGGAAGGGTC
GTGGAAAGATAGTTGCGATCCGCGGTGCACAAAATGTATGCAAATAGCCGAACTGGGATT
TTATGTCCGTGTAGAAGATGCAAAGAAATCGTCATGTTGGACCCCTTTGAGAGTGGTAAT
TTGAAGGCGCACATGCTCATGCATGGTTTAATGGATGGATATACTCGGTGGGAAGTGAAG
AGGATGATGAGGATGTCCACATGATCGTAGGCGATAACGACTTGGGGCTATATGAAGAGA
TGACTGATGATGGACCCAAAGATGAGGGCGTCGGACATGGCGATGGAGAAGAGTCCGGAC
ATGGCAGTGAAGAGGTCGGACACGTCGGAGAAGTGGCAGGACATGGTTGAGAAGAGGCGG
ATACGCCGCAGTATCCGTTGCTACTAAGTTCAGTCATACAGGACCCTCATATTCGAGACC
TGATTTTCAAGAATACGACTAGGGATAGAGCTGCTTCTAGAGAGGAGGCCAATCCGGCGC
AACTGGAGGTAGACTCACAGAGTCCATTGCATGACGAGTGCGATCCCGAGGTTACCCGCT
TTAGTTTCACGCTCGAACCTCTAAAGACGAAGGCCAAAAAAAATGGACAGATGCAAGCCT
CGATGAGCATTTCAAGTATCTAAATAATAAAGTTCTTCTTGTGAGGAACGTGTGTCCTAC
TAGTGTTGATGAGGCCAATAAGATCGTGTGCCTTCTTGATCTGCCACACATTAGATACCA
TGCATGCATCAATGATTGCATCATTTATCAGAAGGGGCACGTGGAGAAAACTAGTTGTGT
GGTGTGCAATACTTCTCGATACAAGAAGGCCGGAAAAAATGTCCTCAGAAAGTTGTATGG
TACTTACCGATCACTCCCTATTTGCAGCATTGTTTTGTAGATCCTAAGGAAGCAAAGCTC
ATGCGCTGGATGCGGAGAGGGTGAAGCCCGATGACGGAGATGATCCGAAGCTGAGACACC
TCATAGATGCTAGTCGGTGGAGAGCATTCAATGGTGATTATCGATATTTCTCACATGATG
CAAGGAACATCGTGCTTGGCGTGAGTACCAAATGGAATGAATCTGTTTGGCAACCTGAAC
AACAACCATAGCACATAGCCCATGTTTGTGTACAACCTCCCCCTGGTTGTGCATGAAGTC
AAAGTACATACACATGAGTATGCTGATTCAAGGGTCTAAACAACCGGGAAATAATATTGA
TCTATATCCGGGGCTACTGAAAAAGGAGTTAGAAACGTTATGGAAAACACCGGCCAAGAC
ATGGGACACGAGCAAAGGCGACTATTTATATATGAGAGTCGCGCTGATGACGGTGGTGCA
TGACTATCTCGGTTATGGATATGTCACAAGCGAGGTGTGCCATGGATATTGCGGGTGCAC
CCAGTGCATGGATGATACAACATCTCAGCAACTAACGAAAGATGGCTGGTTTGGGAAAAT
CGTGTACATGGGCATCGAAGATGAATCGATAAGGATGACACATGGAGAAACCGTGGAGAT
CTATTCAATGGTGAGGCTGAGCATCGAGGACCTCCATGTAAGAGGAGAAGCGCCGAAATA
GATGAGCTGTTGAAAACTAGGAGGAGTGTCCCGCGTCAAGAAAGATGAAAAAGGTGCCGG
AGCCACTCCTGAAGGTATGGAAAACGAGGTCTATTTTCGGGAGTTGGACCATGATACGTC
TCCAACATATCTA
