Contig Data
morexGenes
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Map Locations of contig_135396 (2586 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_135396

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4683 2 1338 bp MLOC_4683.1 Available Available LOC_Os04g59260.1, FRAME:+1, EVALUE:2e-153, 13104.m06245 protein peroxidase precursor, putative, expressed





CDS Structure of MLOC_4683






Contig Sequence (2586 bp)

>contig_135396 2586 assembly3_WGSMorex_rbca.fasta
CATTCAAATCATGCAAATTATAGTACAAAACAAGGGTTAAAGGGTTTGAAAAAATAGATA
CGATGAAGACATATCATGTACATTAAAGGTTTGTTGCATCGTTGTTCCGATTTTCGATGG
TATGTGTAGGGGTGAGGTCTTGGCAAGCGGCCCTGATCTTGACCACCATTATCATAGGTG
GGGTGACTTTGTGGCCTAGAAAGTGTATTCATTTTTTGATAAAACACTACTACAATCCCG
TTTTGCCACGAGTTCCAATTCTTCGCGGAGTGCATTCTCTCGGGCAAACTTTCTGTCCCC
CGAGTTTGATCCAAAATTGGACTCGGTGGTAGTAAGCTATTCCGCAGAGCACTGGCTTTG
TCAGGTTCTCATGAAAAATGACTCGTCGAACAAAAAAACTCAGAACACTATCAAGTTCGT
CGAGTTATCGAAGAAAACGACTCGGTGAACACTGACATGTGGGCTACGCCGAGCTTTTTC
ACTAAGTTCGTGATAGAAAGCATTCGACAGTAGTAATGATTGTTGAGGACTGTCTAGCCG
AGTGTCTTGCGCCGAGTTTGGAACTCGGCAAATAGTTCAGTGAGTTTGATATATGCTTTG
TCGAGATTCTTTGAAACTCGACAATAATGGCCATTCTAGTATAGTGAAATTCCATAATAT
AAAGTGTATTTCTTCTAAATCCTTGTAATTTCCTTTTTAGTCCTAGAAAAATGAAAAGAA
TCATCTCCATATTGCCTGTATCTCGTATCTCTTAGTTTCTTGGACTCACTGATTAATTTG
CCACAGACCAACAAATTCACTTGTTGTCATTTACAGCAACAAAAATTTGTACTCCCTCCA
TCTTAAAATAACTGTCTCAACTTTATACTAGCTCTAGTATAAAGTTGTACTAACCTTAAG
ACACTTATTTTGGGACGAAGGGAGTACAAACAAGCATTTGTTTTGGATTGTTTCCATGTA
ACTATTTTGAATCTTCAAAATACTAGAGCAAAGCCATCTTAAACAAAGGAAGCCCAACTA
GTATGTCATGCTTAATATTTGACTTTCTTTTAGTATTTTTGGTGTGATCCATGCTAGGAT
TAATTGGACAAATATCTCTACTTCGTTGTTTCCCGTTTAGCTTATAAATAACGGCCATTT
CGCTAAACTTTAGCAAGCCACACGCCTAGCCTTAGCTAGCTAGCTTACTCCACACTCCAC
ACCCACCGCATCGCACCAACAATGGCGATGGCGAGCAGCAGGGGCGGCGCCGGCGCACTG
GTTCTGGCCTTCGTGACCGTCGCAGTGCTGGTCTCCCCCGCGCTGTCCGCCCCTCTGGAC
GGAGCCGGCTTCCACTCGGCAACGTGCCCGCAGCTGGAGAGCATCGTGCTGTCCTCCGTG
CAGGCGGCGCTCCAGCGCGACGTGGCGCTCGCCGCCGGCCTCCTCCGCATCTTCTTCCAC
GACTGCTTCCCGCAGGGCTGCGACGCGTCCGTGTACCTCAAGGGCAGAGGCACGGAGCAG
ACTATGGGACCCAACACCACGCTGCAGCCGCGCGCGCTGCAGCTCGTCGAAGACATCCGC
GCCAAGGTGCACGCCGCGTGCGGCCCCACCGTGTCCTGCGCCGACATCTCCGCCCTCGCC
ACCCGCGACGCCGTCGTGCTCTCCGGCGGGCCCAACTACACCGTGCCCCAGGGCCAGTTC
GACAGCCTCGCCCCAGCGTCCGAGAACGTCGTCGACGGCCTGCCGTCGCCGGCCACCGAC
AGCGTCACCATCCTCGCGCGCGCCTTCAGAGCCAAGGGCCTCCGCGACCTCGCCGACCTC
GTGGCGCTCTCGGGCGCGCACACCGTCGGGAGGACCGGCTGCCCGTTCTTCGCCGACCGG
GCTCAGCGCATGGACGACGCCTTCTCCCGCAGGCTGGCGGCCAACTGCAGCGCGGCCCCG
AACCGGCTGCAGAATCTGGACGTGGTGACTCCCGACCTGTTCGACAACGGTTACTACAAG
GCGCTGGTGAACAGCCAGGGCGTGTTCACCTCCGACATGGCGCTCATCAAGGACCGCACC
ACGGCGCCCATCGTGAGGCAGTTCGCGCGCAGCAAGGACGCCTTCTTCGCGCAGTTCGCC
AAATCCATGGCCAAGCTCGCCACCGCGCCCCGGCCCGGCGGCAACGTCGGTGAGATCCGT
CGCAGCTGCTTCAGCCGCAACGCCCGGCGCGCCATCGACACCGTCGTCGACGCCAGTGCT
GGTGACGAGGAGGGCTTCGCGGCCTCCGCTTGATGTCAGTTTGCAGTTACTAATCCGTGT
GGTGTGTTTGTGTTTGTGTTTGTGTGCGCGCGCGCGTCAGTTGATCCCAGAGCGCGCCTT
GTGTTCTGCTGCTTCCTTGGTTCGTTCGTGCAGTATAATAAGCAAAAAGACTTTTCAAAA
ATTTGAACACAGTATATATACAAACCCTCGTATATACTCCCTCCGTTCCTAAANNNAAGT
CTTTCTAGAGATTTCACTAATAGACTATATACGGATGTATATAGACATACTCTAGAGTGT
AGATTCACTCATTTTGCTCCGTATATAGACTCCTAGTGAAATTGCTTAAAAGACTTATAT
TTAGAA