Map Locations of contig_135381 (9952 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_135381

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4668 5 3138 bp MLOC_4668.1 Available Available LOC_Os02g47670.2, FRAME:-3, EVALUE:0.0, 13102.m05377 protein bg55, putative, expressed





CDS Structure of MLOC_4668






Contig Sequence (9952 bp)

>contig_135381 9952 assembly3_WGSMorex_rbca.fasta
TAGGTAAAAGTGTTAGTACAAGAGAAAATGTATGTTGTCATGAANNNNNNNNNNNNNNNA
GGGAGCATATGTGCTTTCACTATGTATTAGACTCTCTACCGATCAAAGATTTAGATCTAA
AAATTATTTCAAACAGCAAGAAAAACAAAAGGACACTCCAAGAATAGCACATATAATTTG
AACAAAAAAAATTAGGATCAACCGAGACTAATCGATCGTTGTTGACGAAGAGGGGTGGAT
GCCTAACATGGCATCCCAAGCTTAGATTCTCGAGATTCTTTCTAATATTAACTTGGGGAG
CCTTGGGCATCCCCAATCTTGAGCTCTTGTGTCTCGTTAATTCCTCTCATATCACAGTTT
CTCCTAAGTTTCAAAACTTCATCCACACAAACTACAGCTGTAGCAGCATTGACTGACGCC
GTCCCCAAGGAGCACGCGGCAAGGTCTTCACAAGCCATCAAGACAACAACATTGTGGCTA
GTCTCCAGGATAAAAAGTTGAAGCAAAGGAGCCCGTCGGAGGTCTCGGGACCTTCACTGC
AACCTCGGCCACGCTCACGGGCTACTAACGGGGTCCAGTATCGAGGGTGGCTAACCACTA
GGAGCCTGGCCTCGTCAAACACAAGAGGTCACAACATGATCAAGACGTCGAGCGAACCTT
AGAGGCAAGACGACCTTCTTGACGTCCAAGACTAGAGGACGGCAACATCCAAGATTGCAT
CTGGCATGTAAACCCTAGGCCTCTCTTACCTATATAAAGGGAGGCATAGGGCCGTTCTTC
GTCATCTATCATTAGATAGGAGAATTCTCGGTAGCAATCTCATACACCATTGTAACCCCT
CGCACGAGGTATCCCTCCACTATTAATAACTGAAACCAGTAGGACGTAGGGTATTACTCT
TTAGAGTTGTGAACTTGAATAAACCCCTCGTGTGAACTCCGATCCATGACTTCCAGCTAT
GCTTGGACCCATACCGAGGGATGTCACGGAAATCTGCTCCGTCGCCATTATGTTGAGAAT
ATTTTGAGTTGTTAAGATATTCGTACTTTAAAATTTCGTCAACACCATATGATCCTAGTT
TGCGGATTAGAAAGTTCGAAGGCAGAAGTAAAGATCAACTAAGATACTCCCAAGTTATTG
GTTCACTCATGTACCTAATGAGCACTATGAGACCTGACATCATGTTTGTTGTGAACAAAC
CGGGCCGGTTTGTTACCAATCTAGGTGATGTACATTGGCATGTTGTTGAAAGAATTGTGC
ACTGTCTGAAAGGCACTGTGAACTATGGACTTCACTATACCTGATACACGTCGGTACTTA
AAGGGTATACTGATGTGAATTGGATCTCTCGTGGTGATGAGTTAAAGGCCACAATTGGAT
ATGTGTTTACTCTTTGAGGTGGCATTGTTTCCTGGAAGTATTGCAAGCAAACGGTCCTAA
CGAGATCGACAATGCAAGCAGAATTCACAACATGAGACACATCTAATGTTGAAGCAGAAT
GGCTTTAAGATCTTTTGATGGACTTGGTGGTGGTTGAAAAGCCAGTACCAACTATCCTTA
TGAACTATGACAAGCACACATTTATTGTCAAGGTAAAGAGTTCAAAGGACAACATGTAGT
CCAACAAACACACAAGAATGAGATTAAAAGTTGTGACATGTTTAAGAAACTCTAGAGTGA
TAATGTTGGATTATATCACGCTAAGAATCTGGTAGATCCCTTTACTAAAGGGCTACCACG
TATTGTGATAGAAAATGCATCGAGGTAGATGGGTATGAGACCCACATGAGTTGCCATGGT
GGTAATCCAACCTATGTGATCGTAGTTCCCGTGAAATGGTAACCGAAAAAACAAACTAGT
GGTTAACTAAGGAGAGTAACTTTACTAACCCACTCTGTCGTACATGCAATACTCTCGAAA
AATGTATGACAGGTTGACATTTGTCTTAATGTGTTTCAAAGCTTGTATAAGCAAGGTGAT
ATCCTATAGATTGATCTTTGAAGGAACACACATATATGAGCTCGACTATTGGTCACAATG
TTAGAGATTGGGTGATCTCTAGCAAGCTCATGAATGGGCCACGCGTGTGACTAATATGCT
CCACCCGAGGGGTCAACCTTCGAAAGCCTAGTACTAGCAAGACATCTGGTAAAACTTCTT
TACGCCAAACTGAAAATTGAAGGCATAGCACATTGTTCAGTTGTGAAGGAGTGTAGTTAC
TTGCTCTTGATGGAGTTCAACCTTAACAGGTCTTCACTGAAATATTGGTATATCAAAACT
GTGTTTGGAACGTAGAACGGAATGGGCCCTCGAGATCTGGTGGGGGATTGTTGAAATATG
GGATGGGCTTTAGACCCATCCAACAATTTCACAAAAATCTCTATGGGCCCATGTAGATGT
TATGACAAGGAAGTGATGAAAGTTTAGTCCCACTCCGTTGGTGGAGAAGAAGTTGGACCT
GCTTATAAGGGATTCTCTTTCACATGCTATTGAAGCTTGAGAAGAGAAGTGGTTGTTGTG
CGCTCTTTCTCCGTCGTCCTTCTCGCCATGCCTCTTCGCGTCACGCGACGGGTTGAGGAA
ATGAGCCGAGCTGAGAGTCCTTAGCAGACGAGCCACGATCTAAAACGTTGGATCGCGGAG
TGTTGCTGACTTGGATGTGGGGGCGTCGGTAACCCTAACCGCCACGAGAAAAACACGTCG
CATGTACTCTGCCTCCATGCGCACCACCCCGACATCTTTTTGTTGTGGCTGCTATGAGTG
ATCCCTTTCTGTCCACCACGTACACGATTGACGTGACAGCAGGCCTCCGAAACCACCGCC
TCTCCAGAACATGTACGAGAAAGGGATGGTTAGGTTTTTGAAGAGAGTCTCCTACGTACG
CGACTACTCGCCGCCTTCCATCTACGTTAGTTGCATCGTCTAAATCCACGTCGCCATCCT
TGCCGCCATGGCCACTGAAGACCGACTCGTCGTCGAAAAACTTGAAGCCGAGAAGAAGGC
AACTTAGGAGACCGTTTCGGCTGCGGTGTCTGCGTGGCCTGTGGCCTATTGAAGGGTATA
ACTCCCTTATCCCGTTCATGTTAATTACCAGCGTTATGTGTAGATGTGTCTATTGTTTAA
GTAGTAAGTGCTCATCTCATCGAATATCAATTTATGCTTAGCAACGCGTACATCATGTTC
GTGATTTATTCCTAGATTAAACTAATCAAAAAACTGCTAATGTTATCAACAGTTCGAACG
TCTCCGTGAACATTTGGTGAGGTTTGTTTCGGTGATCCGTGGTGGAGTTGCCCTCACTCC
CCTGGCGCCAGGAGCACGGGAGGTGATCATCAGAACGGTGCCTTTTGCATTGCCCCGAAG
GAAAGGGACAAACGAGCAAGATGCCGGCATGGCAACACGGTGCGTCGCACCTGGGCGTCA
TCATAGGACGAAGAAGACACATCCATGGTCGGCATCAGTCCGCCCATCCATCCATCCATC
CACAGATTGGACGACCATGACTGGGATGATGGGCGTCGAGTGCGGGATGATCGGGCGCGC
CATGGGCATTAACGGCGCTGATCCAGCGAAAAGCGAACACTCCGGAAAGGACCGGGACGG
GACGAAACCCAAAGCTGAGCGCCACCAGTGGCAGTACCATACCTGATGCTCTCCACACAT
GCATGCACGTACCAGGTCAGGTTCCCTGCACCGGGCAGGAGACGATCTCCGGCACCGAAC
TACTGCACGGGGTGCTGGCCAGCCCGAGCCAATCATGGCGACTGAAACCGGCATGATTGC
GAGCTCCATTCGTCTTTCTTTTTCTTTCTTTCTTCCTCCTTTGCCTGCTCGGTAACCGTC
TTCACGATCCATCGTGCGATGACTGACATAAAAGGGTACAACAGATCTGCGGATCCTTGG
AGCGCCGGCCCGCCTGCGGGACGGATCCGGAGCACCTGGACGCCCAGCAATTGGCACAAA
CAAAGGCGACTGCGCAGTTGCGAAAGAGGCCGCATGATTGCATTCTGCATCATAATGTGA
TGGTGATGCCAGCCAATTTTTTTGTATGATATGAGTGCCGCGGGATGGCTCCAGCTGACC
AAATGGCAACTTGTGTGTGTATATATCATTGAACAGCACTGGTAAATTTCCACTTAGAAT
TACCCAAGTTGGGAAATTACATCCTTCATTGTGCATGAGAAGGAGCTTAGAATTCCCACT
TACAATTACCCAAGTTGGGAAATTTCCATTAGAATTACTTATCTTATCCCAAGGCATGAG
AAAGAGCTCTTTTCTGGCAAATAATAGGATGAGCCACTTGCCCTGCTTTGTTGAGATAAG
AATAAGATGAGTAAAATCTTCATTCATTTGGGGCTTTCCAGCTACTGTGGAACAGTAGGG
TACAAAAAGGCAAACTTTTTGCCACTGAAGGCAGGCATGGATGGAACTATACCAGCTGTC
TTTCTTTACTTCTTATACACACACATCTACAATCTGCAAGACTGGTAAATCTGCTAACCA
ATATATACCGAAAGACTCGAGGATGAAAAAGATCATCTCACCAAGCATTTCATCCGGGCA
ATACAACTGCTACTTTTACCATCTATATATGCCAAGCAAAAAAAGAACGGTTAGTGTTGT
ACTAACATGTACAAGGCCTACAAACTCTGTCCTCAAAACAGCGTCAGGGACCGAGGTTTC
GAGAAAATGTTCAGCTTCCTTTGGAAAAACCCAGATGACTTCGATGCTGGCCGCCTGTGA
ATCGGGCTCTCCGTGGGAGGATCCTCTACTATCACCTCGGCGGCCGCCACTTCCTGTGAA
CACGAGTTGTTGATCTCGCTTTGCCTCATGTCCCTAAGAAGATTCAGTAGCTTGAACGAG
CAACTCTTCGCTTCATCAATCCCGTTCACCGACAGGTCCACGAGGGCGGGGATTACGCCC
TCCTTCATCACGTGGGAGCAATCCTCCACGCTACGGGAACATATTGCCAGAAGGATTATC
ACTGCAAGTTCTCGCTCTTTAGGGCTTCCTGTGTCTAGATACTCTGCAATGGAACCAAGG
CATCGGTCTGTTCTGGTAATAAGCGCCATAGCTTCTTCCACTTCGCATAAGTTCCGCAAA
ATCTCCAAACAGCACTCCACGAAGCTTCCTTCTGCCAAAATGGGAACCAGCTTCGAGATT
ATTCCCAGTGAAATCAGCTGTGACTTCACATCAGCACCGGATGAAAGGTCACAGATAATC
TTCAAGGGAAGCTCAAGGCCCTCAATATCTTCAGACGCCAATATTGCCAAAACTGGAGGA
GTGACAATAGAGGCCATCTGACGGGATTGCCGATGACTCAGGTGTCGAATCAGTTCATGG
AGTACCAACAAAGCTTCAGTTTTTAGCTCTGAACTGAGGAAGGACGTGATAAGATGGAAT
GCTTCTTCATCCATGGATGGAATCTTAGCCCTGCAACTCAAACAATAGTGTCTTTGAGAA
TGCTATCATGAGGCCTGAGATATGCATAAAACTAGTAGATAGAATAGATAGATATATGTA
GTACTGCTTGAACCCCAATCTAAATTAATGAAAGGATGATCTGGATAAGTCAGAGAAGAT
TGATTCTCTTACCTGCTGTTCGAAAGGAAATTAAGAAAAAAATGTAATCCAGCTTGCTGA
GCTTTCATACTGTAGCTGCTGCTATCATTTCTCAAGAATTCAAGGAATGCTTCTACAAAT
CCATGGGATATCATAGCCCAGGAAACATCATCGTCATTGTGAAGAATACTCTTCAGATCT
TTAATGGAGCTTCCTTGTATTTCTAATGGGAGCTTGGACAGCTCGCAGAAGAATGTCAGG
AACATAGCCTGGTTGAAGTTGTGGAATGACAGATACTTCTGATAGTCTGCACTCCAAGAG
AACTGAGAAAAACTATCCTTCGGCTCCTCCATATCCTTCACGTGGGAGGAATCTGAGACA
TAACTGGCATCAGAGAACGCGACAGATGAACTGCTGTGATCAATCACAAAATTCCTGGCA
TTCCCAGCAATTAGAGGTACTGAAACATTGTGCAAACTTGACATAGAGTGACCATTCAAT
TGCTCTGGTAAGTAACTGTAGGAATCTTTGCTTGGAAGAAAATCTGAGATTGTGAAACCA
TGCTCTCTGCACCAATTGCATATGAGATCCCTCATGCAAGTATTTGGAATCATCGCAAAG
TTTTCTACCTTCATTTGTGTCTTGGGACAAGTGTCGTGTCCCTCACTGAACCATTTCTCA
ATATATTCTCTTTCGTAAGTCTGTCCAGATGTTATTATCACAGGATCACACATTAGCTTT
GTTGATATTGGGCAACAGAACTCTGTAGGTGGTGTGGTTTCTCCAGACATACTACTCTGA
TACTCGTATCCCTGGAAGTATGTTGGCTTGTGGCACTTTTCAGGAGTACTGGCATTGCTT
GCAAGACTTAAGCTTGAACTCAAAGACCGACTTTCAGATTGTAAATTTTCATTCCGCTCA
CCAGTGTCTGGTTTGATGTTCTTTCCATACTTTTTAACAAGATATAGGAAGAACTTAAGA
ACCTGCTCCTTTTTTGGATCAGTACCAGTAATCTTATCGAGCAGTTTATTGATTGCTCTT
CGTTCAATCAAGACAGCTTTAGGAGATGTCAGGTTTAACTTTGAAGCTGCCTGCACGAAT
GTCTGAAGTTCAAGTTCTTCAGTTGCATCAGACTGCCGAAGCATCTCTAAAATTGATTTG
CCAGCCTCTTGCTCCAATGGATCAACAACAAATTTTACATCTCGAAGGTCATTATGGACC
TCAGCAATCTGTGTTACATAGCAAAGTATACACAATCAATCAATAAAAAATAATAGTGAA
GATGCTAAGGATGCTTGAAATTGTGTGATAAGCAATACAAATAGGGACTACGGATATCCG
TTTATCTTATAAATTTCCCACAACAAATCAATCAAAGCACATAATAGTGAAGATGCTATC
ATAAGAACACATGAAATTGTATGATAAGCAACACCAAAACGGCCTATTGGTATATTCATC
CTAGCATAAGTTGAGTTGGTGACACACACACAAAAAAGAGTAAAACATCAAACTATATCA
ACTAACCTGATTAGCTAGCACTGTTGGGACCATATTCTGAATCAGGAACAGACTCCGTTT
AAGTGAGTCTCTGACCCTTTCACATCGTAATAAAATTGCCTCTCCAGTAATAGCCTGAAC
ATAAATATCCAAAATCATCAAATAATACTTTCAAAAGCACAAAGTAGTCACAACAAAAGG
GTCCAAGAATCAATAATAAATTTAGGATATTATAATCTTAAGTTTCCCATGAACACAGGA
ATAACATACCAAGTAGAGTTTGCTACATTCGACGCAGTGCTGACTTATGAGTCTTCCTTT
CTCAACTATATGGTATAGGTTGCACAATTCCTGTATTCCTGCTTTACATCCTGGTCGAGC
TGCCTCAATTGATGGAAGAATAGAGGAGATTTTATCTAGCATCATTGTCAACTCACTGCA
CAATGAGCTGTGAACCTAACAAAAGCAAGACAATTCATATAAAAGCATTAATAAAAAAAA
TTAGGTACACAAAGATGAAACTAAAAAGACGATGAATGGAACCCTTGCATGACTAGTATG
ACACATAAGAAACAGCATGATTTCCCCGCCATATACGAGAGGGTTTCATCTTGCATAATA
AAGGCATATAACCAAATGCCCCGTGTCTGAATAAAAAGTACTGGAATGGTTGGAAAAACT
GAGAGGTAATTAAGTATTCCACCTTTGGACAAGAGTTGCGCCGTGATAAACCCGTGTTCG
CCATTGTCGAAGAGTGACTGCCAATCTTAATCGTAAGGGCCTTGAACTGTTGAACAGGGA
AGAAAATAATGTCATGAAAATGCTGTGAATTAAGTCAGGGAAATCCAACCATATCAGGAC
ACTGAAGAATGTTACTAAGTTGTCAAAGGAAACAATAGTTCGGTCCACACAAATGTCAAA
TTTGTAAGGTATATGGTGATGGTGGTGGCTCGTTGCATCAAGGGAACATCTCTCACCATG
CATTTTTTTTCTGAATGCTTTTTTCTTATCACAGTTACATAATTCAGGAAGTGTTTATCA
AAAATAAATTATTAGTAGCTAGCTGTTTTCATAGCTATGTCGGGTGAGAGTGCTATGACT
CCCCTTACAGGTCCAACTGCATAACTAGATTGCATTTACGAACAATGATTAATCGTCGAG
AAACCAAGACATGTCATCATTTGTACTAACAGATGGCCCTAATAACCCAACCTCTCGTCT
TCTAGCACAGGCAAAAAGTAAACCGATTGGTCAAAATACCTCTTGAACAACCACCATTAT
TGAAAGTCAACAAATTGGTCCGCAGCCGGTCTTTTTGTTCTTTCAACAACCATGCAATAA
AATAATAAGAATAAAAGTTGAATCGAGTTGATTATGGGCCATCGGACCATTTCATCCTCG
GCCTTACACAATTGGTTGAAGAAATCAAACCACGGATAAGAGCAGGAATAAATAAACAAA
CGAGTTGTATTCTGAATTTCAAAGCGTCTCAATGGGTGGGTACATGACAAACCCCCGGTC
GTATGGGCCAAGCAAACGTAATCGTTTCCAGCGCTAAGCTTGATGCAGGAAGCATACGCA
GAGAGGAAAGGGGATTGGAGTTTTGCAAGAACCCACTGATCAGTTGGTTTGCTATTGGCG
GTATCAAGTATCAACCCAACCCGCATGAGGCATGAATGGACCCCAACCACCCCGGCCATT
AGCACAAAAGCGGAAAGCACTGGAAGGGGAAGAGAAACATAAAAAATCAGCCCCTTTGGG
CAGAAAGACCTAAACGGCGCGGGCCAGAAAAATCATCATAGAAAAAGATTGGCGTTTTGT
TCCCAGGGATGGAAGAAGAGGGCAGGTCCAGCCGACGATTTAGCAACTCAATCAAAAGGT
GATTATCGATCATGGAAACGGCACCAAATCCCTCCGGATCATCAACAAGAGAGGATGCAC
ACGGGGGGATTCAATGGAGCATCGGCAGCATAGGGGCATAACAAGATGGAATCAACTTGG
AAGGGGGACGAGACAACCAACCTGCTGGCGCGCGGTAGGAACGACCCAAAACCAAGCTGC
GCGCAGAGAAAGCAACGAACCTCCTCCTTGTTGCTGTTATTTGTCGCCCCTCGACACGGG
GACAGAGGGGATAGATGGAAGGAACCCTGCTTCCTCCTGCAACCACAAAGTCGAACGGAA
CGAATCAGCCGGACGTCCTCCCTCCCCGGCAAGCAAGGCAGCAGCGAGAGGAAGAGCGAT
AGAGGCTCGTGGAGCGGGGGAGGGACCATACCAGGCGCAAGAACGGCAACCCTCTGCTGG
CTCACCGGAGCATGGACGGACGGAGGGATGGAGGGGTCCTTGGATTTGGATGCCGGAAGC
GGGTGGGGTTCGAGGAATGGAGTACGGAGGCGTTTGCTCCCTGGGTCGACCAGTCTCCTC
CTAGTCTAGTACTCGTAGCGGTATAGAAGGAGACGGATAAAGGCGGCGCGGGGAGGAGGG
GAGGAGGGGGCAGCGGGACAGAGAGAGGGAGAAAGGAATCGTGGGAATGATGGGAGCCAC
AGGCACACCACCACCTGCGCCCATAGCGCGCGCGCGCGCACCAGCGAGTATAATATTCCT
CGTCGCGCTCGGGCTCGCTGCTTTTCCTTCCCGGTCGCCGTCCCCGCCATAGCGGTTTGC
GGGGCCCGCCCCCGGATGGCGCCCTGTCCGTCTCCATCGGCTCGGTAGAGACACGCACCA
CACCACCTTCCCACGAGACCCCGCGCGTGGACACGTACGTGCCATGGCGACTGCGCGCCC
ACGGTGCACCACACCAGCACCAGGGTCCCGGACCCAGCGAGCGCCGAAGCTAACCGACGG
GCGCGGCCTCGCGGACCACGCGCGCGCGGCGGGGCAGGCGGAAAGGCAGGGT