Contig Data
morexGenes
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Map Locations of contig_135380 (4137 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_135380

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4666 2 903 bp MLOC_4666.1 Available Available None
MLOC_4667 3 2156 bp AK358499 Available Available None





CDS Structure of MLOC_4666






CDS Structure of MLOC_4667






Contig Sequence (4137 bp)

>contig_135380 4137 assembly3_WGSMorex_rbca.fasta
GCATGAGCAAAACTGACCAACTGTACAAAGTGTTCAAGAAGCAATCAAACAACAGTCTGA
CGCTTTAATAGGTCAAATATAAGAAACATAGCAGCCAGTTCTGAATCCAAACGACCAACA
TTCTTCACTAGATGCATCATTTCACTTTACTATCAGGTTAAGAAAGCAATCAATCAACAA
TCTCAGGATCTCGTGGCGCTATCACACGTGATGTACAAAGGCAGGCAAGGAAAAGAGTAA
AAATATACCACAACATTTCACTCTGGAATCCCATGTTACACGGATACGGCCAAAAATCAG
CATATCAGCGGTTGGATACGTCCAGATACGGGGATACGCCCAGATACCCCTTGAAACGTG
TCAGGTCATTTTTCCATTTACCAAAACGATTAAAATAAGTCAGATATGGTGGAGATACCT
GCGGATACACATGGGATACCGAGGAAACCTAACACTCTACGTACAAAAGCGCTCGCAGAG
CGCAGCAGGCACTATTCTCCCCTCGATGCGCCACCGACGCCAGGCCCCGGCTGAGCACCA
CCACCTCCTCCCTACCTGCACCGGCGACAAAAGCCAACAAGCTACCGCTGCTCAACGCCA
CCCTAGAGGAGACGAGCAGTCATTGGCTGCCGCTGCTCCTGCCATCCTGCACTCTCATCC
CAGATCTGAGCGCTGCCGGTACCACACACCTCCCTCTGTGCCGGAGTTAGAGCATCACCA
TCCACCTGCTCCATCTCACCCAGCCACCCAGGTGTGATTCCACTTCCCCCTCTCCCTTCT
CCCTACTCCGCTTCTCATGAGTAGCTGCCTCTGCTCACTTCTGTGCTGCAGAGGGCATGG
GATTTTACCAGGGCAATGGGTGATGGGATTTTACTAGTGCAGTAGTACCTTGTTGGGCTA
CCTGGGCTGAGTGGGCTAGTGTGCTTGGTGGGCTTAGAAACAATGGGGTTTTCTTGCCAA
AATAAAAAACTTGAGGAACAAGCAACATCATAACAATTATCAATAAAAGGTTACCCCTGA
ACTGTCGTTTCTCTCATTCCCATGTGCAAATAATCAATATCTATATTTTAAATATTTATT
AGCCGTATCTGCATACTTGAAAATTTGCCATATCACAGTATTGTGGCACCCGTATCACCG
TATCCACGCAACTTAGCTGGAATCATGCATTTTAAAATAGAAGAACAAAGCATACTAGTA
CTAACAACCACTTTAGCATCACCCATGAGTAGACACTGCATAATCAGATCAGACAGTTAA
ATTACTCTATGATCATGCATGACTTCTATGTACTACAATGAGAATAGAGACGATGTATAT
ACCAAATTTTAAGAAAGTCATAATGCACATATTTCGAGCAGCAGCTTATAATATAACCAA
CGACTGACAAGTGAAATTTCCTGATTTTTGTTTTGTCATCTACACACACAGCCATCTAGA
AGAGAATGCATTAATTGCTAGTAGTAATTGGACATAATCACATAATCAGATGCAGTACAC
GTGAGCATTTAATTATTTACATGAAGGACATGTGAATGGTGTGCAAGTCGTGATGTTTGC
AAGTGAAATGAGGTGAGATCCTGGACTATGGGATACTAATTAGAACTTTATTCTTTCAAA
GAACAATTTAGTTAAGAAAACCTGCAGTAACCTTTTCTTGATTTTTATGGTGAGTCCTGG
GATATGGATTGATAAAAATATCTTGGGGAGAAACAAAGCAAAATCCCATATCTTCACAAA
TAAGTCTCATAACTGCAGCATCTCGTTTGAATCTTGCAAAGAAGCATTACCAAACTAAGT
TTCCAATATCATGAGCAGTTTTTGGTCAAGTTCATTAGAGCAGATCGAAATTCAAGTATA
AAGGTGTATAGAGGAATCGTGTAAACCGGGTATAAAAAGCAAAAAAGAACTCTTAAAATT
CCAGAAAAGGAGGTTAACAGGAATGGGAAATGACAGGTTTAGTTGTTCGGTATAGGACTA
CAAGATCTGAAGATATTCAGGATCAGGAATGTGTAATCCCAATTCCCAAGGGAGAACATT
TCAATTGTTTGGGACTGGAATTGAAAACTGGGTATAAAAAACAAAAAAGAACTCCTAAAA
TTCCAATTGATGTATTGCAGTAAAACAAGTGAATGGTAATAATTACTAAAACTGCACTAT
TCAATCTTACCACTCAACTCAACTTCAAACTCCAATGCCGATAACAAATACAGACAATTA
AACAATAGAGGAGGGTTGATAAAAATAATTTGTGAAAGATATCATGCACTTTTGTTTTTG
ATTACTTTATAGTGTTCACACATACATCACAAACAGTGTAGGATAAAAGATTTTCTATAT
GACAGCACATATACATGTCCAAGACAACTAATAAACTCAATAAGTAATGCAGTTATATTC
TGAAGGCAGGGCAATCTTACTATAACCAGCTATTAGTCTATCGGCACAAGGGCATAGCAA
TAGGCTTAACTAACTCACATGGCACAGGTCTGTAACTATTGTTCTAAGCTACTGCATGAA
CACATCATAATGAATCAAACATCGTAATTAAAGAAGCGCAAACTCATTTTACATAGCCCC
AGCAAGTAACCCACATACTCAGCTAAGCTTATCTAATTGCAAGTAACCCACATACTCAGC
TAAGCTTATCTATAATGCGAAGTTATATCGATCTCCACACAAACACCTGCACTATAATCG
ATGTGCTAATTATAACATAACAAACCCTGAAACCCAGAATCCAAGCAGCACAGGAACTGG
ATCTTAGAAGGAAAAAATAATGATGAGCACACCAACACCATACCTGCTGCAACAGCACGA
TTCTCTGGTTCGTAGATGCCATGACTAGCGCACAAAAGGGGAAGCGTGATGCATTCAGAC
TGTTGCTCATCTTGAACCCTTCAGTCCTCCTGATGCTACCACCCCATGCAACGAAGTTCT
CATCTATGAAGGCGGCCACCGGCTCGGAGCAGAGGCAGCCACCGCAGAATGCCGGGGTGG
CCGGGTGGTCAGGGGAGTGGAGGTACACGAAGAGAAGCTTGTACTCACGCTGCGCACGCT
GCAGCGCGTCAGAAAATCCCTCAGCGACGAAGCGCGGGCCACGGCCAGCCCCAAACTCGT
GCTCGAACTCGGCCAGGAAGCCAACCGCCTCCGCGGCGGACGGGGGCAGCTCAAGCAAGC
GGTCAGCGCCGCCCTGCGCGAGGCCGAGGAGGGAGAGGGATCGGGACAGCACGCCGCTCG
CGACCCAGACACCGAGGCGGATGGAACCGGTGACGAGGCCGACCCCACCGGAGACCACGT
AGAAAGGGAGGGTCACTAGCCTCCACGCGATCCCCGGCTGCTGCCGCTGCTGCTGCTGCT
GAGGGGCCGGCGCAGGGGGCTGATAGGCGATAGAATCGGACTCCAGCGGAGGCGGGGGCG
GCGGGGCGTAAGTGGACGGCTCGGGCGAGGAGGGGTCGCCGGTCATGGAGGAGACGGCGA
GCTGGAGGTCCCAGTTGTTGGCGGCGAGAATCTGGGAGCAGAGGTCAGGGTCGGGGATGC
CTGTGACGGCCTGGAAGTATGCAACCTTGTCGTCGACGGTCTCGGCCATGGCGGCCGGCT
GCGTGGTGGGGGTGGGGTAGAGCTAGGGTTTGGAGATTTGGGGGCGGTTAGGTGGTTGGG
ACTAGAGAGGAAGAGGAGATGCGAAGAGTAGTCTCAACTCTCGAGTTGGATTGGTCGCGA
GAGCGAGCAAAGAGACGACTCGGTGGTGACGTGACGTCTCCTCTTCCTTCACGGAACGGA
ACGGAATGCTGCGCTCATCGCTTCTCTAGTAAGCATACGGCGTAACGTATTGTGATTTAT
GAAATTTTCTGTTGAATTTGCTGAGTTTTTTTTAAATATATTAATATCAGGAATATCTAT
ACCTCTATATATACCTATACCTACCTAATAATAATGCGGCTATTGCTTCCGTCGGAAAAC
CCATCACGGCATTTTATAAAAAAAAAATGTAATTTTTGTTATTCAACCCGCNNNNNNNNN
NNNNNNNNNNNNNNAAAAGGAAAAAACGATTCGCTGCAAAAAATTATACCCGTACGCATC
GCCTTCTCCCGTCGACCCTGGGCCACCCTGGCCTATGCCCAGGTCGCCGCCACACCA