Contig Data
morexGenes
Links



Map Locations of contig_135352 (4706 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_135352

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4646 1 879 bp None Available Available None
MLOC_4647 1 634 bp None Available Available None





CDS Structure of MLOC_4646






CDS Structure of MLOC_4647






Contig Sequence (4706 bp)

>contig_135352 4706 assembly3_WGSMorex_rbca.fasta
ACTTTGTATCCTTTTTATTTTTAATGTAATCTACTTTTAAAAAATGTTGTGCGCGCTGCA
TTATAGCGCGGCTGTTGGAGCGAGCGCCTATCCCTGCGCTAAACCAGCCGACGTGCGCTG
TAAATACATTTTTTAGGCGTGGCGCGAAGCGCGGTTGTTGGAGATGCTCTTAGAGCACCC
CATCTCTCTCCCTAGACGCGCGGCAATCCCCCGTAGCAGCCAATTGAACGAAGCCGGCCG
CCCTGCTCAACTTCGGCCGCATCATCCACCGGCAACCTCCGATCGATTCCGGTGCAACCG
ACCCCTCCCGTTCGACCTTAGCCACCAGTAGTTCTACCACGCCTCTAGAATCAATCCGCA
TGCCCAATTGCATAGAAAATGAACCATAGACAAAGTGCACAGGACACAGGAGCTTCCGTC
TGCCATGGTTCGAAGTGTGCTCTTCCTCGAGCTCTCCGTCGACCCCTTGCCCTCGAGAGG
ATGAGTCCCTTCCCCCTAAACGCGTCGGTGTGCCTAGCTCCAGGAAATATGCCTTCTAGC
ACCGGCAATTGCCATCGGCGTCGACTCCTTCTCCTTGTCCATGCGTGCGAGGGAGGAAGA
CGAACCCTATGGGTGGCCCCCACCTGTCGGTGGGGTAGTAGATGCCTCCAATGGCACACC
CGTGCTGGTGTGCGTCCTCTGCCAGAAAGTAAACACACAAAAGTATGCTTCCCCTCTTCT
TTTAAAGTATTCTTCTTGAAACATTTTCTTTTTTCTGTTTTATTTAAAAAATCAGATTTG
ATCTAATTTTGACTGCTTATAACTTTTAAAATACAACTCCAAATGAGTTGATTCTTTTTC
TGTTATTTCTTAAATTTCACCTAGTTTATTGTCATATTTATTTCAAGAAATTTCAAACAA
CTTTTTTACACTGTTTTGGGAATGTGTGTTGATTCCATTATTTTCAAAAATAGGAAAATT
GGAGGGAGGAATCCTTTCGAAGATTTTGGAGTGCACGGCACCCTTCTTCATAGCCAAGGC
AAGCATCTTGAAGACTGATTTTTCCTAAGCTAAGTGGTTGCTTGCTGCGAAAAATGATTG
CATGATATGTTTGTAAGATCAAAATTTCCATATAGGAAGTATTTATGTATGAATGCACGT
GACATGTATTCCCTTTATGTGTTGTCACTCAGACGCCCGACTGTGGCAACTATTATTATT
TTCATATAAGCAGTTTCTGTGGCGTCGCTCACATGCCTGACTGTAGCAACTGTTATTATT
TTCATATAAGCCATTTGTGTGGCGTCGCTCAGACGCCCGACCGAAGCACATTTTATATTG
TTATCCTTTCGAGGTGTTGCTTCAGACGCCCGATCGGTCCATTTATTCCTATTGTTAATT
ACTTCCCGCGTCTTCTTATACACAATGAGTAGGAATGATTCATCTACATAAGTGCACCCG
TAAATTATATCTTATGACATGTCAAGGTTATTAAGATTTTAGTGCATGCATCTCATCTTC
TTTTACTTATCTGTTTTCGGATGTTTGCGAGTACATTCAAAGTACCCACTGGCTTCACCC
TGTCTATGGTCTTGGCCAAATTGCGTTCTTGGAGAGGAGCACGATGACGTCAACCCCGGA
ACCTAGGAGTCAAGGATAGCATCCTTGCAAGATAGGAATTATCTAGGTTAGCCGTTCCTA
TGGGAATGGAGTCCCATGGACGCTAGAGATCCATGAGTCGCTTCCGCCGTTAGGATCTAG
ACTTTTTGTTCAACCCCATGGACCTTCATGGTCTTGTACCCCAAATTTTGTATTTTGCCT
GGAATTTCTGTATTAAGTGAGTGTCCACCAGCTAACAGTAATCCTGGGGCTGGTGAACAC
AAAGGCCTGTTACTGGGAATTTTATATCCTGGAAAATTGATCGCTACAGTGAGGCTGCAG
CAAGCACTAAGCATTTGATATATGGCTAACTTATGAGTATAAGAATAAGAATAGTGATCT
ATGATAATCGGTCACGAACTGGTAATGATCAAGAAGTGAACCCGAAGACCTACTTATGAG
TCAATCATAACCCCACCATGTTCCCTTCTTGCTTCAACCTCATAAGAAGAAACAATCATG
GTTACACACACATTTGGTGTATTTTATTTTAGTTTACATCAAGTTTGCTATAACATGATG
TTATACAAATTTCCAAGTTCCCACATAACTGTGGGCATAACTCTCAGAAAGTTTTAACCC
TGCCGGGGTCCTCCACCTCATCCAACAAAAACTAGCCACAAGCTGCGTTGGAAAACCTCA
ACCTCGAGNNNNNNCAAAGTATCCTCAGAATCCCGGTGCACAAGATATCTGATAAGGGTA
AAACAAATCCAACAAGAATGCTCGACGTGTAGACAATCCTAATAGGAGACGCGTATCTCG
TTCTTAGGACACGGCGAATGAGCTATGGTTACCACGCAAATCACCGAGTTGCCACGGGCA
GCGTTAAAAAGATGCTCTGGTTTTCACCAACACTCATGAGGAGCACTGGCCCGAGTTGTT
GATTAATTATCCACATGGTTTGGAAAGTCCCTATGCATTTTTATTATTTTGAGAAATGTA
GTACCAATGCTGGGCCTTGCCGGAAGAATTTTATCCCAAAATGAATTATCAGGGGGTCCC
CATAACAANNNNNNNNNNNNNNNNNNNNCTCAATATGGAACATAACACTAGTAGACAAGT
AACTAGGGCGACAAAGGTGGAACAAAACACTAAGAAGAGGCCAAGCCTTCCACCTTTTAC
NNNNNNNNNNNNNNNNNNNNNNTAAATAGCAATAATATTGTGATATCCGAAGATATCCAT
GCCATTACATGGAACAAACCTGCACATGCAACTAGAAATGCTATAAGAAGGGCTGAGTAA
TTGATAACATAGCCAAATAATGGTTTGCTGGGATGTGGAAGGTTAGAGGCTTATCATGGC
ATTTTGGTAGGCTTGACAAGCAAGTAGTAGGAACCGAGACATAGCGATAGAAACACAACA
ATTAGCATGGCAATGATAGTAGTGGTACCCTAGGAAGTGTTCATCTTGCTTGAGAACCCG
CTTGTAAGAAGAACGAATCCATGAAATAGACGAACCGACGTAGTCGAACGAATACTCACA
CCTTGAAACACTTTTATAACAATAGCACGGAGAAGTAAATTCGGAAACAAGTAAATGACA
CACGGTAACCACCATAACATATTCATGATATGATGCACAAACGAGGAGGATGCATGTCAT
GTTTAATTATTGAAGACATGGCAACACACAACAATCAAATACTACAAATTAAGTGAAGCT
CAATATCCAGTGACTGCATATTGACGAAACTCCACGATCAATTTAGGTAGTTCACTCCCG
TTTATGTACTCAATAATTTAAATGTAGTTCAACATGGCAAGGGGTGAAGCATAAATAAAA
TTAAACATCTAGAAAAGTCTAAATGAGGTCGGAAATAACATATAACATTTCCGAAATGAC
CCCATATGCATAATATAAATTTGGTCCCATTTTGCCTAACCATGTTTTCTATTTATTAAA
CAGCAAAATAAAGTGCACCTGTTATTCTACACATTTGTCTAGGCAAGTTACATATATTGA
TCATTTTAATCAGAGCTATGATTAATTTAATTATCAAATAAACTGTTTTAGCATGGCATT
TATGAAAATTAAACATTTTTTATCATGGATGAAAGTTGGATATTGTGAATCTACACAAAA
TTCTAGTGGTTTTACATATTTAAAACATTTTAAATCGGTACACGGTTCTTAAGTTATTAA
ATGCATAAACATTAGGGTTTTTTTGTCTAAAACAAATAATTCACAGATTAAATACTAAAT
TCTTACACGAAAAAAACAATGAATGGGCCAAAACTCAATAGGATCGCTGTGCACGAGATA
GCCGACGGGCACACTAGGTGATGGATAGGGGATGAGCTGGGCTTGGGAGCTCACCTTCGT
GGGCTTGGCCCAAGTGGTGGCCGGATGCAGGTGAGCTGAAGGCGTCTCCATGGGCGCAAC
TGGGATGGCCTAGCTTGGGGATGGTGTCTAGCACAGGGACATGGTCAACGTGCTCGAGGT
CGAGCGCTGCTACTCTATCCTGGCGCACACGAGACGAGCAGAGGAGGTGGTAACCTCCTG
TGGGTGCAACGATAGGGTCCAACGAGGGTGGAGCCAAAACATGGGCGCAGACAGAGGCAA
TGATGGCCAGACCGGTTGTGACGGAGGTCGACGTGGCTGTCGATGTTCAAGGAAGGTGCC
ACGTCGAAGCTTGGGGCAAGCATACTTCGGCTAACGTCAATGGCGGGTGGTCCCTAAGCA
TCCACGAGAGGGAGAGAGAGAGACCGAAGAGGTTAGAGAGAGAGAACCAAAGGGAGAGAC
AAGAAAGAGAGAAGGCATGAGGAGAGGGACATGGAGCTGGACCTACGACTCCGGTGGTCA
AGGACGAAGGCTGCTACATGGCTACGGGCGCGCTGGACCTTGCTCGAGGAGGAGCATGGG
AGGAGGAGCTGCAGGAAGACTGCGTGGTCATTGCTGTGGTGGCTGGCAAGGTCAAGGTCC
GGTGGCTAAAATCTCGGGCTCCTAGACGAGGGGAGGCTTGATACATTCTCCAATGTATCT
ATAATTTTTTATTATTCCATGCTAACATATGCAACAGTTAGGTGTAGCAGAGATGCACAT
GTTGAGATGGATATGTGGCCACACAA