Map Locations of contig_135335 (5726 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_135335

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4625 1 4716 bp MLOC_4625.1 Available Available None





CDS Structure of MLOC_4625






Contig Sequence (5726 bp)

>contig_135335 5726 assembly3_WGSMorex_rbca.fasta
CAAATCCTATCCATCTAAAACTCCTATGGTGGTTCGATCTCTAGACGTACAGAAAGACTC
CCCTGTTGCTTGCAAGTCTCTAAGTCGTCTAGAGGTTTCAAATGGGACTTATTATCTACA
GGGGGAGTTTCTTCTTGGGATATCCTTGTTCAAATAACATCTCAAGGTGGGGTTTAATTA
CATAATTAGTTTTAACCCCTGTAGATTAGGGGGTGTTAAAACTAATTATGTAATTAGGGG
AAATCTCCCCTTGACCAACCATCAAGCGGTTCCTCCCGCAACAACGGTTCTCTCTCTGTC
TCTCCTAAAACCGACGCATCCCTTTGCGTTCGCGTCTCCTCCCGTTGTATAAAATGACAG
ATCCCTGTCATTATTGAATCAAGAATCTCATTTTCTTCTTACATTTTCTTCAAATAAGAA
GAAACGCTCCACTAGCACCCCTCCGAAAACAATGGTGGTTGTCGCCCCTCAACACAACAG
CAGCACCATGCACCGTAGGGATACTCGGGACTGCCATCAGCAAAGGGTCAAACCCCATCG
GCATAAGGGCACGACCCTCCCAACACTGTGGTGACCTCCAAGCACGCCCCTCTCAACACC
ATGGTGGCCGCATCCAGCGACATTACGACCAAAGCTGGAGGCCCCCCACTACATGGCGAC
GGCCGAAGCTGAAGGCCCACTACATGGCCACGACAGGCAACGAGGCAATAGCAACAACTA
TCAACAAGTGCACTTTCACTTCTCTGTCTTGTTGCTGTTCGCTCTCTTCTGGTAGGAAGT
GAGTGTCAACAAAAAGAGAGTACGTAGTTCACTAGTGAAATCTCTAGAAAGACTTATATT
TAGGAACGGTGGAAGTACATAATAACATAAATAAACCAAGGACAAAAGAAAAGGAACTTG
TATTTGCAATGGCTCATATCAAGAAATGCACCCACGAATTGGTATTTCCATTTCAAGGGT
CAATCAGAAGCGCAGGTAAGATTCTAATCACTGTCACCAAACCATTAAGATCTGAAATAG
AAACAGAGGAAATAAGCATGAATCCGTTGCTCTGACACAAGATTGCTCGTCCAAGTATGT
ATCAGCATTGGGGCTTTCCTTTATCATTATATCAATACAGGGTTATCATCATGCAGAAAA
AAATCACTTTTGATAATGTATCCTGAAGAAAGCTAATTTAAAAAGTACGAGCTAAGCCTT
TTTAAGCCTCAGAAAGCCGCAAAAATATCATCATTTGGAATCTGACGGTCATTCAAACAT
AAAGCTAATCATCATCCGCTTCAAATTGCATTGTAGCTTGAAAACAGGGCCATGTAATGT
CACCTTTGCATCTCCACCTTCAAATTGGAGTTTAGTTTGGAAGGTAAGAAGAAGCAAATT
GTCAATGAAACCATAAGTATGGTCTGTTCGTGCTCAGATTCTATGGGTGTATAGGTGTCG
TTCAGAGGGATCTCCCTTCAGTACGAGGAATGTTATATAATCATTGCACCAGCAACGGTT
CAAGTGGCTAAATCAGTGATACAACAAGAACTTGAATTATATTCCCTCTTTCCTAAATTA
CTTGTCACAGAAATGAATGTATGTACATACTTTTAGTCCTAATACATCCATTCAAAAGAA
AGCACGAAAAAAAGACTAAACTGGAATTTGGGGGCGAGCGTAACCCAAGATCCATCTAGA
CGGATTTGTGCTCTAAGCGCCACCTGAATACCTTTCGGGAGCTTTGTAAACTCGGATCCA
CCAGAGAACGGCGGCCAGACATTGGGACAGTGCTCCCAAATCATACAAACATAACAGAAG
CAAAATTGTTCTGAATATGTGTGGCGAGTTACTAATGAAGCACCTCCACTAGGAAAGAAG
GCGCTATCAGCGAAACTCCCAGACATCAGTCTTGGCCTCCCATGAATCAGAAGAACAGCT
AAGCAAGTTAATCCGGGATTATGAAGGCCAGAGAGAAATTAAAAACATAAACCATGGAAC
AACAAAGATTAGATTCGAAATTTTCAAGAACCAATCCAACACCAAGCAACAGATGTGGAG
GGTGAGACACGGTGGAGGCTCTAGATAAGTGTACGCCCGCAACGGAACCAGCATGGCAAA
ACAAAATCCAGCAGGATCTCTCAAAGGCAACCATGTGTTAACACCAAATATTGCCTACAT
ATGAAAATGGAATAGAAGTATTGCAGAGCCAAGTCAACTCCTGGGGAAAAAACATGCCTC
AGATAAACACATCCGTAGCTACTGGCCATCACATATTAAACTAACAGTGAAGTAGTATTA
AGACCAAGAAATAAATCAAAAGAAATAAAGACGGAATTTTATTATTCATCAGGACAATGC
AGCAAGATATACCACAAACAAAGCAAACAACACAGGCCAATAATACAATGAGCATTTTAA
TATATCTGTTCATGTTTAAAGAATTTTATTCCACCAGTTCTGCTTAAGAAAATAAGACTT
AATTCCTTCAGTTAACTTTCCATGGGTTCTGCAACACAGATGATTCAAGCAGGAATACAT
ATGAGTGAATCTGGTGTCGTTATTTAACTCCCATCTCGTAGGGCAGAGAGACGAAGCTGA
TGACAACACACAATCTGCGAGTTTTTCAGCCTCTTCCACATATAAGAGGTACTTGTGAAG
AGGATAGTTAAACTCAAGAGATAAATACACAGCCATTTAATTATCAATTAAAAAACAGAG
GTTAACTGGATAGCATTAAGATAAGTTTCTTGTGATCATCAAGAACCTCAGACTTGCCCA
TGAATGTCATGCAGACACAGCGCCTCCAGGTAGGTTCATCCTGTAAACAGGATCCTGGAG
TCATCTGCACCTCCAAATGTAGGGTGTAGCATCACTGGCAATTCAGATGGTGTTTCATAA
CAAATTACATGCCAAAATATTTAGATAGAAAATGTACGGAAGTGAAGATAATCAATCATT
AATTTACAGGTATCAACAACGGTACAACACAGTGCAAAATAGCTCAGATATTATATAACA
GATTTTTCAGTCATGAATTCTCAGAAGCAGAACTGGCATGTTTGCTGAAAGTGTTAATCA
TCACTGCCATGGTAAAACAAAAATACACAAAATCTAAAACAGAGAACCAAGATTAAATAA
TGGCTCATATTAAGAAATTCAACCATGTTTTCCCTTGTACTTCATGGATTAATCAGAAGC
GCGGGTAAAATTTAAATCATAGCCATCATTCAAATGAAATACAAAAATGATAAAGAAATA
GTGGAGAAAAGAGAACATGAAAAGATACTTGAATGCTGAGGTGGCATCAGATAATAAGCG
GAGTTTTGTAAACATATCAAAGATTCAGTGTTTAGCATACAATATTTCACCTCATTTGCC
ACCCTAAGATACATGATTGATAAAATTGCAAGGAAAATAGCTGACAAATGCAGAGTGTGA
ATGGAAGGCATCATCAGATAATAATCAGAGATTCATTAGTCCGTGCATGGAATTTTGCAT
TAAGAGTGCAGGATATTTTCAGATTGTCGGAAACAGAAATCTGAGACAATACATTTGACT
ACGAGCAATGGCCTCGGATTGGGGCAAAGTAATAAACTGAAACACATCAATCTATGAGGA
CGAATATGAGCTTAGACACAAATTTTACAATAAGAAAACAGAAACATACAGCTGGAAAAG
AAACATCTTGTTTTCTCTCAGATGCTATCCACAAGGGTAAGCACAGATGATGCAGACATA
TCAACATGGCATCAGTTCAGACCGCCCGTCTGCTTTTACTCGCTTCACCGAGAAAGATTT
CGGAGCAAATCACGGAAAACAACAATATGAAAACGAAAGTAATCACATGATAAGCTTAAA
ACAAACACAAAAAGGAACTAACATGATTTCTGGCTAGGAATCCTGATGGAAGGGGAAAGG
ATCCTAATTTCCATTCCATTTACAAATCAGAGCACAAACAATACAAACAGAAAAATGTGC
GTCAAGATTATTTGGAGACATGGATCAGATTTCTGGCTTGGAATCCTCTGATAAAGGAGT
ACAGTTGCGCACAGTATAATCACCGTCGATCATTTGGGGAAAGGATCCTCACTTCCATTC
AAGTACTCAAAATAGAACAATCAAAATCAGAAAGTTAGAAGAGATGATGTCTGGTTTGGA
ATCCTCCAATAGAGGATTAAATTTCTGAGTGGTGAAAACAAAATAAATTAAAAAAAACTA
AGGTGTCAAAGATAACAATGATGGATCAGAGTTCTGGCTTGGAATCCTCTGATAGAAGAT
TACAGTAGCGCACAGTATAATCATAGTCGATCAGTTGGGGAAAGGATCCTCACTTCCATT
CAATACACAAATCAAAGCAGCAAAACAAAGGTAACATACAAGACGGGAAAAGGGGGATGG
AGATTGTTGAAAGAGATGGATCAGATTTCTGGCTTGGAATCCTCTGATAAAGGATTACAT
TTGCGCACAGTATAATCATAGTCGATCAGCTGGGGAAAGGATCCTCACTTCCATCTAAAT
CCAGAACGCAATCTCAGAAACAAGAGAATCCATGGGCGGCAACTGGTCTAATTGCTTGTG
GTTCAAAAGTTTTACTAGAAGAAAGGAGTGTAAGCTCTGCTAACAAGAAAAGAAACTGTT
CTATTAGACCAGAAAGTCAAACTGGAGCAGATCAAATTCATCCAAAGCAGAAATACCTAA
CAGAGCAAAAAAGGATGACCAAAGCTGAAACAAGCTAAATGGCTCACATGGTCGCATCCC
TCGGATCTCATAGCTATGTGCCATCACAGACAAACTTAAAAGCACACTAGTTTTAGCCAC
AAGCCACGGGTACAAAGAATACACTAAATGGCTTGAAGCTAAAACTAATCGACCATTCAT
CTTTGGGACTAAATTCTTTCTTCATTGGGATACCGCTACTTGAGCTAGATACCACATACA
AATAAAACTACTTAACAGGACAATGGTACACTAGGTTAATCGTAGTATAAACCAAAGGAG
AAGGAGGGATTACGCTAACCGTAGTAGAAATCAAAGGAGAAGGACGGATTACGTGATCAT
ATTGATGGCGTCCCTCAGATCTCATAGCTAATATGGCCATCACCGACGACCCTAACAATG
GTTTTAGCGCCAAGCCACCAGCTCAACAAAACTGCAAGATAAGACGGCTTGAGGCTAAAA
CCAGTCATCAGTCGTCTTTGGACCTGAATTTTATCTTCACGGGGACCGTCAATCGAATAT
ATAACCGATCTCGACGTAACGAAAACTGGCAGGCGTGAGTATGCACGGCAAAACAACAGC
AATGGCATGAATTCAAAAGTATAGATCGACCAGGGTTCGCTGAGACGAGCTTCGAATCCC
AGATCGGTGGGAACTCGCCGCCCGGACCGCCGACCTCGGTTGGACTGAGAAAGCGGATAC
GCCGCGGCAGCTACCACAGGTTAGGCGACCGTGCGACTCTCCGCCGTCGGAAGGCTACCC
GTGTCGGGGCATCCGGTGGGCGACAACGCCTGAGGGGTGGCCGCCGGCCCGTCGCGGGGG
GCGAGAACTAGAGCACGAGGGAACCTGAGCGAGTGCAGGCGGTGAGGCGGCGGCGTGGTT
GCAGGAGGCGCAGGTGGGTGGCGGCGGCGGCCGGACTGGGGAGACAGGGAGTAGGGGGGC
GTGACCCTGCAGATTAGGTTTCCGCTCCCTTCCTTTTGTAGCCGGCTCGACGTGAACCCT
CGGGGGGGGGGGGGGCGCTACGGGGG