| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_135298
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4591 |
5 |
3200 bp |
MLOC_4591.1 |
Available |
Available |
LOC_Os01g39000.2, FRAME:+2, EVALUE:9e-59, 13101.m03981 protein ZmGR2c, putative, expressed |
| MLOC_4592 |
2 |
2209 bp |
MLOC_4592.2 |
Available |
Available |
LOC_Os01g38990.1, FRAME:-3, EVALUE:0.0, 13101.m03977 protein mitochondrial carrier protein, putative, expressed |
CDS Structure of MLOC_4591
CDS Structure of MLOC_4592
Contig Sequence (9424 bp)
>contig_135298 9424 assembly3_WGSMorex_rbca.fasta
ATATGAATGTATCTAGTCAAGTTTTAATATTTAGATACATCTATTTTTAGACAAAGTTAA
GACAAGAATTTTGGGACGGAGGGAGTATCTTCTAAGTAGTCCTTTCCTAAGTGATCTAAA
TGCTTTTATATTCTTTTAGGGAGTGAGTATATTCTTTTTTATAAAGGAAACGGAGGGTCA
AGTCATGCATTCTATAGGAAGTTGGCAACCACCAGGAATACAAATGGAGTGGAGTACGTG
CGTCTCACAACGGAGGGAAATATCCGATCACGCAATCGAGACCGACCAGATGAGTGTGAC
CTTCAAATACGTTGTTGATAACCACATGCCCTCAGTCACAGGGAACGCTTCAATGCGCGA
GAGAACACGGCAGATGCACACGTGTTGGTCCGATCAGTAGCGTACGTATCCGCGGTTAAT
CTCTTCTTCTTTCTCCAAATAAAAGCATGTATCCATCTGTGTCGGTTTTCCAGACGCTAC
TGCCTGTCGAACAATACGCAAATTGGAGCTCGGATCCGTTACAGCGATGGGCATCCAAAC
TACTCCCTCCGTTTTTAAATATAGGTCTTTTAAGAGATTTCATTAAAGGTCTACATACAG
AATAAAATAAGTGAATCTATAGTCTAAAGTATGTCTATATACATCCGTATGTAGTTTACT
AGTGAAATCTTTACAAAGACTTATATTTAGGAACGGAGGGAGTATGTACGTATCCTATCC
GCGAAGACTAGGACAAAACTATTTGCTTCAAGTCTGCCTTGTGTTGCGACGTACGTACAC
GCTAAAGTGAGTGCACGAGATAGGCTAATGAGACTCCTTGTGTAGCACTTCAGCCTCGAC
TTAAAGTTTCCTGTTACCTGCAAATCCTACACGCTACACGTGGTCGTCACACGCCGATAA
GCATGCTTGTGCTGGTTAAGTCAACACAGAAACCATGCTCATAAACTAGTAACCGCGTTT
TGATCTCGTGTTGTTGGTTTACTAGATAAAGAAATGCAATGACCAGTTTCATAAGTTTTA
GCCAGGAAACTTCGAAGCTGCCGGTTGCGGGTTGGGGCGCCCGGATCCGATTGAATTGAA
GCAACGACTCCAATGCTGGAAGCCATAAAGGGAGGAGCATTTTATTCCTCTGCATATCCC
CTGTCCCTCTTCTCCTCTGCTGCAACTCCTCTCCATTTTTCTCATCGTACCCAGCAAAGT
AGGTAAGATATCTCTTGCTGTCCTCCCTTTTCTTTTCCTCCTTTTTTAGCGCTTTTTGGA
ATGATTAGATGGGTGTTAATGAGTTATATAGGTGGTTAGATGGTCGGATCATTTTCTTTT
TGTTGTGAGTATCAGCGCATTTTGCTTGGGTCCCTCCTCAATTTTCAGTAACCATGAACG
AACCTGGTTGCTACATGAGGCAATACAGATAATGCTTCAGGACAACCATGGATTTGCTTC
CAAATTCAAACTAAGCTAGCTATTACAAGGAGATTGCTGTCTTCATCTTGTACCTTTTAA
GACACAAGTTATTCACAACTAGTGCAACTGTGCAAAGTTATGCTAAGGTTGACACACTTA
TTTTGGAACATAGGGAGTAGATCCGAAGCAACAACAATGGATCAGTACAACTTGCTGTAG
CATTTAGCATTCTTGAGTACGCTACAGCAGGCGGTATGTTGTTTTATACATGCTCTTTTT
TACACCAACTCTTGCAGTGTAAGAGGAAGCACAGAACGAAATGTTTTTCCAGCGCAAGAA
TTCCAAGAAAGTGAAAAACACCGATGCATCGTCGCCCAAGAAGGACAAAGATAGCCGCGG
GAAGAACGACTTCTTCGATCGCGCCAAGGGAGGCTTTGGTGCCCTTGCAGGAAGCATCAA
ATCAGCCAAGAACGGTTAGTTGTTTCGTTTCGTTCATTTTAGAGGCAAAAGGATGCTCTC
TTACAAGAATGCCCCTCCAGCTTCCAACAAAACCTCTTCATCATCTCAGCTCTTGAACCT
TTCATACTGTTTGTCATAATAAGTACTACTACTTTAACTGATAGCAGTAGAGTTTTGTCA
TAACTAGGTGTATTTTTGGTTGCTCAAATCCCATGGTGAGTTCAGTAAAGACATCTCGCG
AGTCAAACAAATGAAAATAGAATCGCTAATGTATCCTCTTATTTTCTGATGAATAGATAT
GTTCAGAAAACAGAAATACTTATTCTGAAAACACTTTTGCGTTTACACCAGAAGAAGAAA
AATTCTGACACTGACATAAACAAGACAGCTGGACAACAGCAATACTTAATCATACTATAA
TGTTTCAGAGTTGAAATGATGTAATTTAATAATTTTGATATTAGCTCTCAGAATTTTTAA
TGCATTGCGCACTTCTCCCGAATTAGCTGTCCCAAGTCTTGACAGACAGTTGGCTATATG
TAACCTTAATAATTTCCTCCACCCTGACCTTTCGGGCCTCATCTACAGACGCTGAAGACA
GGGCAGCAAAGGTTCAAGAGGATGTGAACGCCGGCATTGAAGCAATCTTGGAGAAGGGCT
CAGGCATTCTTGAGAAAGCGAAGGAGGACGTTGGAGGCCAATCAGAAACAAGCCGCTCAA
AGGAACTAGGTACATAATATTCAATTCAGGGTCGTCACTTGAAACGAACATTTCCGGGAC
ATGCAAATATCGCAAATTTCCTTGCGATTCTGGTTGACCATTTCACGCGGAAAACTATAC
CCTGGAATACATATGATTCGATAGCGCAGCTCAACTTTCATCTTCCAATTAGGTCAAAAC
AGTTATAAACTGAAACGGACGCTTAGGCAATACAGAAAATACTGTAGTACATCACTCAGG
AGGCAGTACATGCTCTCTTTTTTACGTTGTAGGAGTACATACAGAGAACAAACTCCTGTA
GATGTTTGCTTCACTCTGCGCTTTCTTAAGCATAAAACACATACGAAAATGGGCAAAAGT
CACTAGTCCGTGCGCAGGTGAGATATCCTTTTCTGATATGGCCTTAGAAGGAAATCAACA
AGGCATGTGAGTAATTAAAAAAGGTGATGTAACAGGCAGTGATTGCAGAAGTTAATTCCA
TCCATAATTCCTAGAGTAGGTTGATTCAGGTCATGTGTGAGATTTTTCCCACCATACGTA
TTGTTTTTTTGAACCTGCGCAACAATCAAACAAACTAAAATTTGAGTGCTGGATATTTGA
TACTGTAAACTTAATAAATATGTAAATATGTCTGTGTGCGTCGTTGTAGAGGCCTGCTTA
AGGCGTGTGAGTTTTATTAAGTTGACAAGTGATCTTTCCAGTTTGCGTCCAACGCAATAT
TACGTTTAACTTTATCCTAATGACTGCTTGAAAGATTACTGTTTTGGCGGCCCACCCATC
AAATTACAGTTTAGATTTGAGCATTTCATAGTTGCGACTTGCAAGAACTGCATGCGCATT
ATTTTTTGGCGGCCTGTCTTCAGCTTTACTTCCAAGGAAAAGCCACTTTATGCACAATGA
TTGTGCAGGACGCTGGAGTAGCTGATACCACCATTTTCCAGCTTGTGTTTGCGTTTCTCC
ATAGAATAGAGGGCCACCCTTGATCCGAAATCGCAAAGAAGCGTCATTTATAGGCTAAAA
TACTACTGTACGTAGTAAGAACATCCCTGATTGCGAGCATAGAGAATAATATATAGAGAT
TGTCGGATGTTTGTTTATAATATATATTCCGATGAAGAGAAGAGGCAGTTACAGCTCAAG
GACCCATGTTGTTGCCTGTGTCCTTGTAGCTGGCGTCCATGTGCCAGCGCCAGCGCCAGC
GCCAGATGGTTCGTTGACCTTGATAGTCGATACACACGCATATTGTACTAGGTACAACCA
AATCCTTAATGTAACGCAATTCGTCCAGCAAGGAAACAGAAACAAAACTCGTGAATAAGG
CAGGGCAGGATCCAACTGTTAGGTCGTATATTCTTATGTCCGCGGATCAAGTAAAACAAA
TGCAGAAAGATATTAGTATCAAGAAGACAGAACATTGATGTGTATCCCTATTTTATTTGA
CCCAGTTGGGCTGTATGATACAAAAACTCTGCATCGTGCGAGCAGTAATGCGAAATCATC
GCCCACCAACCACTATACTAGAATCAATCAATGCCTGCGATTTGCCAGTGTGTAGTAAGT
AGTGTATTTAGCTGTCACCCTCCTGCCCTGCCCTACCAGCACTTGTGCAGTCTCTGTATA
TATAGTGCCCAGCCCAAGACATTATTAGCCTGCTTCTCTTGGTCCAGATCAAGGAGCTCC
GTTAGAGCCCTGGTCCGACTCGGAGATCCCAACCCAGAATTCTTGAGCTCCTCATACAAA
TTATTAGGTCGTGCTTTTCGGCTTGCTTCTGTCTCCTTAGCTTTCCCCATTTATTGTCTG
CGAAATCTGAAGATTCCAACTGGTAAGTGTCTCTTGTTCCTCTTCACTAGTTTGATTCAG
CCTATACTAGATAGGCTTCTGCCCCTGAATCTCTTTCGTCCTTTTGAGAGATCCGGTTTA
CCAAAGCCTTCTGCTTGCTAATGTTCCTCCGGCTACTATTAGGGTCCATATGCAAACTTT
GGGCTTTACAGTTTCTTGATTTGTGATGCCTCAGTTGAAATGCCAAGTGTAGTCTCTGAA
CACTACTTAATTTCTTCTCTCTCTTTTTCTTTTTTTTTCGCGGGGAAATTTCTTAAGGTC
AAGGAAGTGAAGAAGAACAAGGAGAGAAGGACATGGATGCTTTAAGTTCGATGCTCGACA
AGGCGAAAGACAAGGTGAAAAGCAACCCTGATGTGATGGAAAAGGTCAATTCGGTTCTCG
ACAAGGTTAAGAACCACCCAGAAGTGATGGAAAAAGTTGCTGAGGTTTTACATCTGGGAA
AACGTGGTAATAACTTTTCATCCAATTCTAATTTGTAAAATTAGCATATTTCCTGACAAA
TACGTACGTACCTGGCTTGTTGTTGTATCATCAAACCTCTCTAATGATGATGTTTTTGAC
GATTTGGATCATCTTGGATTTGTACAGAATCCAAAGAGAAAGAGGCCGAGGCCGAGGAGA
AGACAAAGGAAGGCGAGACCTCTGCCGACAACACCCAAGACTCAAACATCCTAGACCAGG
CCGTGGAAGAAATTCAGGCTGTTGTGGCAGCTGTGCAGCAGCAGGAAACAACCGGGGATG
AAACTCAAGTTCCAGTGGAGGCTGCTGCTGAAACTAATACTCCAGCTCAAGGAGACAAGC
CCGACGAAGTAAAACGGGAGGCAGAGAAAGACAACCCCAAGAACCGAATCGACTTCGTGG
GCTTCTTCGCCATGATGTTTGAGAGGTTCTGCTCCCCAGCTGACAAGAAGAAAGACTAGT
TCCGTCTTCCGTGTGGCAGAGCTGCCGGATTTATCCATTTGTCTTCATGAAAACTGAATG
GCCTGCATATGGGGTGCCTGTGGTGTGGATGGATGGTGTACAGTTTTGAGTTGTGTGTTC
TTTTGAGATTTATTTCATTTTGGGATTGTCCTTAATGTTGATGGATGCAACAAAAAAAAA
TGTGTTTCATTTTTGTGTAATTATTGTCACTCCTACTCATGGATTTGATCCTATTTATGT
GAATCAAAGGAATTAATTGAATTTCTTTTTGAAGGCTTCAAGTGTAAAAAGAAGTGTAAT
TTCCCTTGTTAATTTTTTGGGCAAATTTCCCTTGGTTAACAGTATGATGTTACTTAAAAT
GCACTCAAGTTCTGGTTCTATGCTGTAGAAAGAAAGAAACGAAATAGAGAAAGATCGTCA
TGTGATCCTTGCGATGCCAATGAAAAGATTTGAACCAAATGAAGCTATAGGGAACTGATT
CATAAACTTAAAGTAGCCAGGGTTCACCATTTCATTTTTGCCGACCTCTGTCACAAATAC
AATTTATGGGACAGCTGATATGTGAATGCCCCAACAACGCAGCTCAAATCTACTCCCTCT
GTACCTAAATNNNNNNNNNNGGGGAGAACTAGACTAGTTCTCCCCAACTACAAGTACTCC
CTCTGTACCTAAATACTTGTAGTTGGGGAGTATTTAGGTACAGAGGGAGTACATTTTTAC
AAATTTTATTTTTGTATTGCCAATGCAACACAATCACAAATAAAATGATATATCAATTCT
ATTATTCATCACACACAATCAGTACACAATCAAATCCAAGTCTGGAGCAGCTCAAATGCT
CAACTGGGCTGTCATTCTTACAAATGTAACAGTTAAGTCACTATTAAGACCATCATATGT
AGCATAGCTTATAAATGAGACCCAAATGCGCAAATAGGTCGATGTTGCTTCATTTGTTGC
TGTTACCAGTCAATGGATGAGCTTTCTCGCGTGGAGGTACTCCCAGCAAATTTTTCATCA
TGTCATATGTTGTGAAACCAATAGCAACTGAAGGGACGACCTGAAATGGATCAATTTTTA
GACAAGTTACATATTTAAGATATATAATTCAAAAAAAAATGAGAGCAAACAATATCTGCC
ATCTCTAATCCTCAATTACCTTGACATAATTAAGGCTCAAGCCAGCGAACAGTTGTCTCC
ACCCTTGGCACCGAATGATAAGAAAGAGACCCTGAAATGTTCCTCTTATGCGGAAGGCGT
CATTTGCATTCTGGGGCTGCTTGTTCTGAACCTGAACACATGACAGGTCAGAAGCTAATC
AGAAGTGCAATCGAACTTACAACCCCATAGATTAGCATGACTACAATGTGAATTATACCT
GCATTTGCCTTCGGACAACATCCAGTGGATAAGTGAGGGTTTGTCCAAAAAGACCAGCCA
AAGCCCCACAAGAGAGCTTCAATATAACAGATCTCTTGTAATCTTCGGGAACACGAGATT
TTAGGTCCTCATATATGTAAAATTTCAGGCCAGCGTATGGAAGAATACCAATCAGGGTTG
GGCCTGGCAGATAATTGAAATTTCATTGTCATGCATTGTCATGCTGTGTAATGCCATGGC
GCAGATGAGCATCACATAACATCTACATACATGATTTTTCACATGTGGAGCACTAAGTGG
TACATAATTTCAAATACCGATCAGTGTTGGGCAAAGTAATGTAAGTAATTTCAAATATAT
TTTCAGGATGTGTTGGCCCATCATACACTACTCTCATATATCGAGTCCTCGCAATTGATT
TTAGGGTCACGTAAAACCACTATGACAGTGTGTGACAGTATTAATCAGTGATACCATATA
TGGATGAAATATAGACTTGCATATGCATTCCAAGCATTCACCTGAACTTTTTTATAGCAC
CCTTGTTACAACATAAAAGCTTTGCAAGTATGGAACATTAGCTGAAGTTACACCGATTGA
GTAGGCTAAGAGACATGATTTCGTAAGTTGATAGCCTCGACATACCTATCCCACGGTACA
AAGATCTTACACCTCCTTCCTTGTAAACAGTTTTAAAAACATCCTTTACACCATTATATA
CTGGTTGGCGGCCAAAATTTCCCAATGAATTGGCAGGTTGGACTACATTTGAAACCTAGT
GAAGCAAATTAATAAGAATAACCATGAGCCAATGTGACGATCAAGAAGCTATTCCAATAG
CACTTCCATTGAAGGTGACTCTTTATTACATATACAAAATAGAAAAGCACTAATCAGCAC
GGTTGTACATACCTGGTATGCCAGCTTGGTCCTAGCCAAATCTAAAGGATAGGTACACAG
AACTGCAGTTCCGCCAGCAGCTGAGCCTGCCAAGAGATCAACCACAGGTCCTGTACCCAC
TGATGGGGCATTATTCAGTATCCAGCACCTATACTGCTCATATGTCATGTAATGCAATGC
TGCATACGGAACAATCCGAAGCACACTCGCACCGTTTCCTCTGCACGAACGATCAATAAA
ATATCAAAATAAGTATGCTGAACTTACCAGTAAAACTTACAAAATCAAGACGCCGAATTC
AACAGTCAGAGTTTAAGGCGTTCTCTCCACTTTACTTACTTGTAGAAGCCTCGAATTCCC
TCGTATTTCCACAGCTTCCTCAAGGATTGGAGAATCCCAAGGGATTGAAACCCTTGGGTT
CTTGTCTATAAAGCAACAGAAGACATATTTTCCTAATATAAGTTAATAAAGGAGCTAAAT
ACCCATGCAACCAGCACAAGCATTAAGCAGTCCATACCTGCAATAAGATCTTTACCCTCT
CTAGTGGCGCGACGGCAGTCTTTGCGAATGCACCAGCTGCACCACCAGCGATAAGCTCCT
TGGCATAGACAGGTAGTAAGTCCAAAGCATTCACTTGTGCGGCTGTTGAGGCCGATGAAA
ATGTGGATTCTTGGGAGGAACCCATGTTTCCAAGTGGGTGGGCAGGTGGGAATATGTAAT
ATCTGCCCTCCTCGGCACTATTAGTAACATTAACACAAAATCAATTCAGGGCAAAGAATA
TATTTTACAGGGCAGAGTGTTGCCAAGAATATGTCCTTGAAATAGGATTATCCAAATTGG
AAGAACAAATCCAAGCTTTAGTCTGTCTCCTCGGGACTCGCATTAACGGGAGAATATGAT
AACCCGGGATAAACTAGAAGCTCGCTCCCAGGTTATCAAAAAAAAAAAAAAAAAACTAAA
GAGGAGAAAGTTGTGGCATAAGCAGGATCCGGACACAGCATTGGCGTGGCCAATCGGCCG
CTTTAGGCAGGGTAAGTATTGGCAACAGTTTGATATAGTAGTGTGCTAGGGTCCAACAAG
ACAAGTAGAGCGAGAGGAGACGGGCAGATCCGAAAAGGCTCCGGCCCGCCGCTGGTGGGT
GCAGGAGGAGTCCCTAGCCCATCCTGGGGCCTATCTCCGGCGGCGGGAGGCGAAAGGCGG
CAGCGCCTTTACGGGGGGCGGGGAGATGGGAGAGAAGGCTCCGGGCAGAGCTCCCTCGCA
TCCAAGTCGCTCCACCAAGAAGCTGGGGGAGGAATACTCATCAATCGCAGAGGATCTGCA
GGTGCGGGTGGATTGGTCTGGTAGGCAGTGATTCCTTGGATCGATTCGGGCGAACCCGTG
GCGCGGACTTGCAGTCAGGGTGGGGGGATGATGAGCTGTTCTCCAAGAAATTCCAAGTGG
AGAGGGTGCCTTGCGTGGCCACCGGCGAACACTCCATCCCACGTGCGCAAAACGGGAGGC
TCCACTCTGTTAGAAATTAATTAGTAGATTAATTAAAAAAAAGTATCTTCTTTTTATGTC
TATTGCCAAGAGGCACCTGTTCTGAAGGGATGCCTCCGATCAGACACATCTTCTTCGCAC
CTCTTCCAGATGTATATATACTTGAGAATCAATAGAAAGAGGATTGATCGTCCATTACTT
TCATTCAATCTCGTTTTACTCTAACACGTTATCAGCACTGCCTCTACTGAGAGCAAGAAA
TCGCCGGCAATTGCCGGAACGAGAAGAACTAGACGAATAGGAGGGAAAGAACAGACAAAT
GGTA
