| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_135263
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4555 |
4 |
3536 bp |
MLOC_4555.1 |
Available |
Available |
LOC_Os01g27040.1, FRAME:-1, EVALUE:0.0, 13101.m02812 protein chromatin-remodeling complex ATPase chain, putative, expressed |
CDS Structure of MLOC_4555
Contig Sequence (8057 bp)
>contig_135263 8057 assembly3_WGSMorex_rbca.fasta
TAATACTCAAGAGTGACAGTACGAACTGGCGACGGTAACGGGGAGGGTCCCGCACAGCGG
AGAGAGAAAGAGTTAACCAGCTGTCCAGCAGATAATACGTATGCGACGTATAGAGCCAGG
ACCGTCGTTCCAAGTATCAGGACCGTATTGACTACGTATTTCCATGTATCGGGACTGTAT
TGAAACACTTCTCAACTTTCAGGACCATGTTGAACCTCGCCGTCAACTTTCAGGACTACT
GGTGCAATTATCTCGTCGTGCAAGTCCCCTCCCCTTCGACGCCATTGTCAGGATCGAAGT
CACAGAAAGGAAAAAATCAGGACGTTTCGACCTGTTTAATTTAAAAAGAGATCGATAATT
GTTGATGACAATACAATGGGTGACATCAATTTTAGGGGGTTCCAACCTGTTTACATCCCT
TCAGTATGGTCCATTCCGCTAGAGTGTAAATTTCCCTCTGGCTCCTAGCTAATAATAAAC
TCATGGCCAGAGATAATCTAGAGAGATTTCACGTGGGTAAGCCTTTAGATTGTGTGTTCT
TCTCCGAACATGAACCAGAGAGACAATAGGCCCGCTGTTTTTCAAATGTGTGGTTGCTAG
GAAAATTCGGGAAACAGTCGCAATATACTTTGATAAACCGTTAGGTGCAGATTTTATTTC
TATTGCTACATGGTGGCCTTCAAATGACAATCATGTTGCCTTCAATTTCTTTTGTGCTTG
CATCCCTTCGCGCATCTGGAAAACTAGAAATGAGCACATCTTTAATACAGTAAATAATGA
TATATGGTCTGATGTCAAGCATATATGGTGGATGGTCACAGTTAATATGTAACCAAAAAT
GCAAATTCATGCTCAAGCGAAACCCTCCGGTGATTGTCTTCACTCTGATAAGACTGCCTC
ACCAACTGGCGGTGGGGTGAGTGAGAGCTGGTGAGCAATGTTAACGGAACCAGGAGGGCT
TTTCAGCGGGTCACACGATCGCCTAAGTTGCTCCATTTCCGTTGTGGTCGTCCAGTTACT
GATGATGGTGATTCGATTGCGAAGTGGTGCACACCAGGTTGCACTTCTGGCTTAGTTCAG
AAGATATATGAAACGAATAAAAAAGCTCAGAAGATATATGGTTGAGCGTCCTGACAGGGC
ATCCTTTCTAATAAGAAGAGAAAAACAAATTAAGCCTTCAAATTCACTCCCAGACACTCT
TGGTTCCTCGTTTTTCGTTAGTCGGCATTTCGGTCTTGGTGATTCAAAACCGGTGACGTT
TCATTCAAAACCAGAGAGAAGTGGTATCCGAAACTTCGCCTACAGATCTTCTTCTACTAC
TCTCTCTGTGTGAATTGTTGATGAGATGACCGTTACTTGTACATCCATAGTGTTCCTGGG
CGTGTACGTGCACGCGGATAATTGTTTTTGTTGCGCCGCACGTTTCCCTACACCGTCATG
ATCAACGACCTCGCTCAACCCTGCCCATGGAGCAACGAGACGCCACATGACATGAAGAGG
TGATGTGCAGATTCTTGCCGTGTGTTAAAAGGGTGACAGGTAGCAACATTATGCCAGGCG
AGACGGTCCGTCGTCCACACCCTCCTCCCTCGGACGACCAACCAAAGGAACAGCTTGCAC
TTCATAGGTGCCCAGGATGTCCAGATGGTGCAAGCCGTGCTGCAGATTGTCATGGTTGTG
AAGTGAGCACTTATAGACAGATTTTGTAGAGAATTTCACCTTTGGGCAACCCAATTTCCA
GGACCACTTGTCCTCCTCACCTAGTTCAATGTGAACCTCGGTGACAGCCTCCCATAGAAT
TAAAACTTGACGAAAGATCTGGCAGTACAGCTTGGACTAGGATTAAGCAGACGATTTGGT
ACAGATCAAAACCAGTACACCATGGCCCCAACCTATCTCTTTATTTATCAACAAGGCACA
AAATTCTCTTTGTGGAGCTTCCTTAGACCAAGGTATTTGATTGAAAGGAGGGCAGTTTGA
AAGTTCAGCAAACGCCTGAATTCACCAATCAGATCATCCTCACAAAAGATTGGGGAAACA
GAGCTTTTACCTAGGTTGCACTTCAAACCCACAAGAACAGCAAAAATCTCCAGAAGAAGA
TTAGCAGCGGCAACAACATTGTGTGTGGCTATTAGGAAGACAATCACATCATCTGCGGAC
AAACGCTGCAGGATGGAGTGTTTATTTCTGAAAGGGTCCAAAATTCCAAATTCCTCAGCC
ATCTCAAAAAGATTGCACAAGAGTCCATGGCGATTATGAAAAGCATGGGCAAGAGGGCAT
CACCCTACCCTAGTCCAGGACCATGAGCAAAACTATGACCTGGAATGCAATTTAGAAGGA
GCTATTTTCTGCCAAGCCTGGAGAACGAGAAAGAAGCTCATGAATTCCCCTCCCCATTTT
TTCTCTTGCTGTTCTCCTCATTGTAGCTAGCTGTCCATCTCACATCGGCGATCAGGCCAG
CAAGAGACATCACACAGTGGGCCTAAGGAGATGATTTACCTGGAGCAAATTAAAGTTCAA
TGCATCTCTATTCTAAAACCATTTTTTGCAGTCATTTGCATACCATCTCCATGCGCAAAC
ACCAAAAGGCCAGGCCAGCATTCAATGTTGAAACCGATCCTGATGCACCCACTACAGGTG
TCCCCGCAACACAAGCATTAAACTTACTTGGATAGAGATTTAACCTAACCGACGATTCAT
CAAGCATATACTACACTAAGATAAGAGGCTTCAAGCGCTGGAAGAAGCCGAGCCCAAAGC
GTCTCCTGACAAGGCAACACCGGATGGATCACCCACGCCTACGCCTTTCCCTTCTTTCCC
TGCAACAACATTGTATTCAGCTTAGCTAGGTTAGTAAGCAGCAGGAGCAGCAGAATCCTC
TCTTCAGCTTGTGCTGGACTGGCTGACTGAGAAAAAGGATTGCTTGGACATACCGAGCCC
AGAAAGTCGTCCATGAGGGACTGCCGTCGCTTCTTGGATGAAGTCGCTGGAGCAGCCGTC
TCGCCGTCTGAAACCCTGGATGCGGCTCGCTTTGAAGGTGTCATCTTCTGCTTTGTTGGT
GTCATCTTCTGCATCACAAAGGAATGATCGCCAGGATTAGTAATGTCATATAAGAAGAAC
AGAATCAAGACCAGTGATGTTCAGCAATAAGAAACTACCTTCTTGGATGAAGCCGCTGGA
GCCGTCTGGCCGTCTGAAACCTTCGATGCAGCTCCCTTTGTTGGAGTCTTCTTCTCCTTT
GTTGGAGTCATCTTCTGCTTTGTTGGAGTGATCTTCTGCTTTGTTGGCGTCATCTTCTGC
TTTGTTGGCGTCATCTTCTGCATGACATGGGAATGATCACCAAAGATTAGCGATATCATA
AGAAGAGCAAAATCAAAACCGGCGATGTTCAACAATAAGAAACTACCTTAGCAAGCCTCT
TCTCTTTCCGTGCCTGCCTTTCTCGCTCATCGTATTCTTGATTCTCTTTCTCAATTAGGC
GGACAAGCGTGTCGCATCGCCTAGCCAGCTCTTGCGCACTTCTCGCCTTCACAAACCAGT
CAAATCGGAACAAGGGTGACTTGCGAAAGGCAGCTCTAAGTTCATCCCACTTCCCGTAAC
CAAGCTTGTGTGCCATGCATAGCTGAAACATAACAGGTTGTTATAATCATGTCACAAACA
TGAAGCAGTATGCGTTAAAATGTGAGGGCATACCATAAAACGGTCGCATTCCTCGGTATA
GAACTTCCCTTTGCTTGTGCCATACTGAACTTTCAACTCTAACCATGGGTTCTTATAGCG
GTCCAACTTCTTCCCAATGGCTGTCATAATCACATCCTTGCGATTTATCCTTCCCTCACC
CCTTTCAATGTTTTTCATAATTCTTTCATAATCTGATTAGACAGGGAGAAACAAACAGAT
TAGTCAGGGTGAACATTTGTTTACATTTTACCATTCACCCAAGCAAAACAGTCAGTTGTT
GTTGAGGCAAGCTGCCTGATGAGGATTTATGTAATAACCCTATATATCTGATGATTTTTT
ATGAATTGACTCGATGGCTTACCACTCAGTTCCTTGTATCTCTCCTTGAAAACTTCAGCA
TATCGTTGAACCTCTTCTTCTGATTTCCCTTCCATTTCAGAGGATATGCTCTTCATGTCA
TTGCGACCATATTTCTCACATGCACGAATAAATGTGTTGAAGTCTCTCTTAGCCCATGTT
GCAAAACCCTAAAATTTGTATCATAGAAAACAAGAATGTCAAGAGAGTTAAAAAGATGAC
TGATGTTATTTTATATTGCATATAATCCTACCGCTTCCAATAACTGTTTCTTCTCCGCCT
CATCCTCTGCAGTAAAAGGCTCCAACTGATCTGAGTGTTGCAGAAGCATAATATCATTAG
CATGGTGTAGCTACATGCTGTAATGCACTTAGAGAAGCAAGAGTTAGCAGTACCTTCATC
TTCACCATCAGTGGTATCTTTCTTCTGGTTGGCTTGCTGCATTGTAAAGATATTATAAAG
CTGGGCAACAATTATCAATGACAACTAGGAAACAATGCACTGGGTATTGGGGTAAGCACA
AAAGAAGCAAAAAATGCTTAAGCTGTTCCTCGATATCTATCTAGCTGAGAAATTACCACG
AGGTATCGGACTTCCTTTTCATACAACTCATTTAGCCTTTGACTGTTGAAGAACTGGAAG
TCATGCCTAACATAAACACATAAGCAGTGAGCAGGCAATACCAAGCAACAAGAAGGATTG
TTTTTTCTTTTAAGAAAATCAAAATAGATAGTAACATTGAAAGAACTTACAAAGTTGGCA
TTTTTGGAATCCGTAGTTCCTTGGGTTTAGCTGGTGCTGCTTGGCGAAGTGCTTGCTTGA
AGTATTCAGACTCATTGTAACTACAACAATAAGTCAAAATTAGGTAAATACAAGTAAACA
GTACATAATGCAACACCACAAAAATGAGTGGCATACCTCTTTATCCTTTCTCTCCTAGGT
AGCTCGACCACCAAATTCTCAGCAACAATTTTCTTGAAATCAGCATTGTCTTCCTCCTTT
AAGCAATCGAAAAACAGAGTCAGTTGGTACTTGATAAGACATTTAACTAAATTTCAAGTG
CATGATTAAGTGGGCAGATCATTACCTTATCACCATCAAAATCATACAATTCAGCAGCTG
CAGAGAAGAAAATTATGATTTGAGAGATATTGGGTAGGGGTGTATGCTATCACCCATGTT
ACATTTAACGAGAGAGAGAGAGAGAGAGAGAGAGAGGTGCATACTGTCATCCATTTTAAA
CTTAATGGCATCCTCTGTGAATTTTTTCATTTTTGCATCCAGCGCTGCTTTTGTCTCTTC
TCCTTTAGCTATAATTCTGTCAACATCCTCATCTGTTATTGTGCTATCCTTCGAACTGAA
CACCATTTCCGCACCAAATCTAACCATTTGCAATAAGTCATCCTTATTGACAGCTGCATA
GAAAACAACCAGGTCAAACTATTACATATCCTACTTACAACAACAAAAAATCTTCCAAAA
GATAGCAATCACAAGCAGCAAAAACTCACTTTTCTGCCCTGACAATCGTCCTTGTTGAAT
AACCAAAGCATCCAATGCAAGCTTCTTGTACGCTCTCTCAATCACTTTTTCCTCAATGGT
ATACTGCAATTTAGTTTCATTGTTAGACAGATACCTGCCAAAAGCAATATTTTGATATTC
TCAACCTAACTTAACAAACCTCGGTGCAAAATCGGAAAACTTGGACTTCTTTCTTTTGAC
CTATCCTATGTGCACGGTCTTGAGCTTGAAGATCAGCTTGTGGATTCCTGCAGATACATT
AGAACCATAAAAAACATAAGATTCAACTTATAGATTTATAGTTTGCAGTCTTAAAAGACA
GCTTACCAGTCACTATCATAAAGAATCACAACATCAGCAGTGGCAAGGTTGATACCAAGT
CCACCAGCCCTGGTTGAAAGCAAGAAAACAAACTTCTCACTTCCTGGTTTGTTAAATGCA
TCAATGGATGCGTCACGATCATCTCCACCTGTACTTCCATCTATTCGGCAATATTGATAC
CCTCTGTATACAAGATAATCTTCCAAGATATCCAAAAGCCTGGTCATCTGCAGATAGTGA
TATGTCAAACAAAGCAAGGTATTTTGGGGGAAATCAATGAACTGTAACAAGGTGCACGTG
TTTAGTAACTCATATGTGATCATGATTTCCTAATTTGCGATATCTAGACTGTCATGTAAA
TCTGTATGGTAAATGATAAATTATCACCTGTGAGAAAATAAGCACCCTGGAGTCGCGGTC
CTTCAATTTGGGCAGCAATTTATCTAACAGAACCATTTTCCCTACAGTATATATCACAAG
AGTTGTTATTAAGCTACCAAAGCAGGATTAGAGAATTGCAACAACAAAATGATCAGCATG
AAAAATATACCTGCAGTCTCAACAAGATGGTCACCAGTTGTGTAAGGTGGGCCCGGTTCT
GCCCCCTGGAATAAATATGGATGGTTGCAGCACTTTCGTAGCTGCATAGCTATGTTAAGC
AACCTTTTACGTTCACCACCAGCATTAATAAGCTCCAAATCTTTCTGAAGCAGACCTCGA
TAGTACTGCTTTTGCATCTGAGACATTCCAACTTTAAGGATAATTTCTTTCTTTGGAGGT
AAACCCTTTTCAACATCAGATTTAAGCCTCCGGAGAAGAAATGGGCGAAGAACCTTCAAA
AAAATTACAAACATGAATTACAATGCTAATTCAAACAAACTGGCACTCATTGAGCACGAG
TGCTACATCCCTACCTTATGAAGCTGCTGAACAACCTCCTGTTGATCATTTTCACCGGTA
ATTTGGAACCACTCATCAAAGGTCTCTGCAGAACTAAATATCTCAGGCAGCAAGAAATTG
AGTAGAGACCAAAGCTCATGGAGATTGTTCTGCAATACATTACATCGGTAAGTGATGAAA
CTGAAAATAAGATTGACAAATATAAAACAATATATTCAGTGGTTGCAATGCATGCTGTAC
GTATATAATACAAAGAAATAGCACTGCCAAAGGCAACCTACCTGGAGTGGAGTGCCTGTG
ATGAGTAGACGATAGTTAGTGCTAAAAAGCCTCATCGTCTTAGACAGAAGAGAGTTCTCA
TTTTTTATCCGATGAGCTTCATCAATAATAATGTAGCGCCAGCTGAAACGCTTCAATGCA
TTTTTTTCTTTGATTGCCATTTCAAAACTGGTCACACACACATCAAATTTTCCTGGCTGT
AGCAAGTTCTCCCTTATATGATTCTGATCAAACAGTAATAAAGTATAGTTAACATGCCAG
CTGAAGTAACAATTATAGTTGAAAAGCAGGGATATAATACCAACCCTCTCTTCTGGATTT
CCCAAGAATTTCACAGCACGCAAAATGGGACAAAAACGAGCAATTTCATTCATCCAGTTA
CCAAGAGTAGACTTTGGTGCAACAACCATGTGAGGACCAGTTATTCCTCTGTATTCATGC
AGATAACCCATCAGTGAAATAGTTTGAAGAGTTTTCCCAAGACCCTGAGTAAATAAATGG
CAAGACAAGGATAAGGTTAGTAACTTGCGTTGATCATTACCACCATACTGATTGAACAAA
ATACTGAAACAGTTTTAGCGACTAGCCTATTGTGTGCTTAACACATCAAACATACCATCT
CATCAGCCAATATTCCATTAATGCTATTTTCATACAGCCGTATGAGCCAATTAAGCCCAG
CTAGTTGGTAATCTCGCATTTGTCCATTTATGCCTGCAAAGCAAACATAATAAGTGTCCA
GTCATCTGGTAGTTAACATATGCTAGACATAATTGAAATTGCCATCCTATTAAAAAGGAC
TTTGGTGCCATTAGCTGATTTTAACAAGAACTGGGTCAGATAGGGTCAGCATGTTTTTGA
TGATATGAAGTAATTGGTGGAAATAAAACAAAAGATGCATCCATTATAAATAGTTCACAT
TTAGCTAGAAATCAAAATACAATAATGATTAAGTTTCATGGAACTAGAAGTCTAGGACTA
CAGATAATTTGGTCAAC
