| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_135231
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4530 |
1 |
1827 bp |
MLOC_4530.1 |
Available |
Available |
LOC_Os03g17740.1, FRAME:+2, EVALUE:0.0, 13103.m02121 protein transporter, putative, expressed |
| MLOC_4531 |
4 |
1422 bp |
MLOC_4531.2 |
Available |
Available |
LOC_Os03g17760.1, FRAME:-2, EVALUE:5e-98, 13103.m02123 protein RNA recognition motif containing protein, putative, expressed |
CDS Structure of MLOC_4530
CDS Structure of MLOC_4531
Contig Sequence (6864 bp)
>contig_135231 6864 assembly3_WGSMorex_rbca.fasta
CCGGCTCGTTCAAGGTTGTTTCACCTTCGTATATGTTCTGCTATCCGAGATCACTCCCCC
CCCCCCCCCCCCGTCATCCCCCCCCCCGCCGCCTCCCTCCTCCTCAGATCCACGCGCGCC
CGCGCGCGACCAGCCGCGATGACGGCCAAGGGCGGCGCGTCGCCGGCGCCGGGCGGCGCG
GGAGCTGCGGCCAACGGGCGCTTCTTCACGGTCGGGCTCGTCACCGCCTGGTACTCCTCC
AACATCGGCGTGCTCCTGCTCAACAAGTACCTCCTCAGCAACTACGGCTTCAAGTACCCC
ATCTTCCTCACCATGTGCCACATGTCCGCCTGCGCGCTCTTCTCCTACGCCGCCATCGCC
TGGCTCCGGATCGTGCCCATGCAGCTCGTGCGCTCCCGCGTACAGCTCGCCAAGATCTCC
GCGCTCAGCCTCGTCTTCTGCGGCTCCGTCGTCTCCGGCAACGTCTCGCTGCGCTACCTG
CCCGTGTCCTTCAACCAGGCCGTCGGCGCCACCACCCCTTTCTTCACCGCCGTGTTCGCC
TACATCATGACCGTCAAGCGGGAGTCGTGGATCACGTACCTCACTCTCGTCCCCGTCGTC
ACCGGCGTCGTCATCGCCAGCGGCGTAAGTTATTACCTGCTCCCTCTCCATGGCTCCTTT
TCGGTAGATCTGTTGGTGTAGGGGTTGGATCTGAGGGGAATTCGGGTCTGGCCAGCTCGG
GATTCCGGGGTAGCGACACTGAGATCTAGCTGATGGGGAGGGGAGGATCTGTCACAATAG
TGTCTAATTACTTGGACTAAAATGGCAGGCGACTCTCCCAGAGTTGATTGAGCGTGCTGT
CTCATACGTCCACAGCTTTCTCCACTAGGGAGAACTCTAGGGATGATGAGTTGGGCTGGG
CAATAGTTTGCCTCATGTCCAGTCATCTTAATAACCTTTTATCAGCCATTTAGTTGTCTG
GAGAGTAATCCGGTTGACTGATTGTTTGCATGATCATATCGTCATCGGGGGATTGGTTCG
GGTTCCTCAGGAAATAAAATCGTTCTGCCGTAAAATTCCACAGTGAAAATGTTAGTTTCC
AAGTTGACCTTACGTCATATACAGGAAAAACCCACATTTATTTGTATTTTAACTTTATTT
GTTTATTTCAGTATGTGTATATTATAAGATTGGAGATGGAAAAACCTTTGGTTTTGAATC
TCAGAAAACTACTTGTGGTTGCTGATGATATATAGCTTGAATACTCTTGACATGGAAGAT
TTTATATTTGTCCGTTAGACCTTATGATGTTAATTGTGGCATTATTAAGCTGTTCCCCAT
GCGATGGATTCTGCATTATGGAGCTGTCGTAATTTCCAGTGTAACATACTAGGTCAGCAA
ACTGTGGGCTGATGGGAGCAGCACTACGTTTAGTAGATTATGACTTGCGTTTATCTTCTG
TAGTTAGCAAACTGTTGCTATTCTTGAAGTCTATTAGAGAGCTGGATTTGCATGTTCTTT
CATCAACTAACTATTATGGTGCAAATCAAATTTACAGGGCGAGCCTAGTTTTCATCTGTT
TGGATTCATCATGTGCATTGGAGCCACTGCCGCAAGGGCGTTGAAGACTGTGTTGCAAGG
AATTCTTCTGTCGTCTGAGGGGTAATCAGTTTTTCTCTGCATTTGTGTGGATGACACATT
TGAATGGATGCTATATACTATTCATGAGCAAAATATATAGACAAAAAATACGAAGCTTTT
AGGATTTGTCTTCCTAGGCACATACCGGGTGTTGTGTGTATACTTCTAGGCTTTGTGTAT
TTAGGTATATCTTGACTCTTCCTTCTAAAAAAATGCATATCTTGACTCTTGACTATTCTG
CCGTCTTGCAGGGAGAAGCTTAATTCTATGAACCTGCTCTTGTACATGGCTCCGATTGCT
GTCATTCTCTTGCTTCCTGCTACCCTGTTTATGGAGGATAATGTTGTTGGCGTTACAATA
GAGCTGGCCAAAAAGGATTTCACCATTGTTTGGTTGCTGTTGTTCAACTCTTGCTTGTCA
TATTTTGTCAATTTGACCAATTTCTTGGTGACCAAACATACTAGCGCATTGACCCTACAG
GTACGCTTTCTCACTGTTAATTAAATTCATTCTTGAGCATAAGTTACTGGAGCATAGCTT
AGCAGGTTGCGCAAGAAGTTGTTTTACATGTGCCTTTTCATGCCAAAACCTCTCCCATTA
ACCTACCACGTTGTAGATTTTATTTTTAAATGTAGTAAAACGATGTAATCATCATTTCAT
GACCCTGTATATAATTCACAGAGAATAAGATCAAAATACTTTGTTCCAAATATGGATGTA
GATGGTTACTTATTTTTCAGCTGTGTCAACTGCAGTCAGTTGCTGAGCTTGCAAATATTC
TAACTGCCACTATGACTAGAAATGCTTATCATAATTCATTTTTTGTTCTTCATAATTCCT
GTTGAGCACACAGCTTCAGGTTTTGTTGAATCATTTTGTCATGTGGGCTTGTTGACACGA
TTGTTTTTTAATGCTAATAAGGATACAGTATGAATCTGCCTGTGTTAGTTGTATTGGCAC
GTGTGCCAAGTAAGCCCATAACTAAATGCAGCATACTTGTGTGATACGTACACCTGAAGC
ATTTTACGGATCTGTCTTCAAACTATGGGGTGTTATGGATGGGCTACTGACCCAAATACC
AAAACTCTATAGAAATATCTGTGGTCCAGAATGTTATGGGGTTTACCTTACCATTTTGGT
GAACTGCTATTATTGTAGCTGTGGAATTCATATTGGCTCTATGATTATGAAAATGTTCAG
TAAATATACGTATTGTCTGCATCTGTCAAGTAAATATCTCAGAACTGTTCTATTTTGACC
ATAATGCATAGCACTTGGTGAACTATGTGTTGAGTTTTTGCTCATGAGGTTGTCTTAGTT
CGTTCAACCAGTAGATAAGTCCTTGGTTTCAGCAAATGAGCGGCTCGATGATTTAACATA
TTCATGTTTATTTCCAGGTCCTTGGGAACGCAAAAGGTGCCGTGGCAGTCGTCGTCTCAA
TTCTGATATTCAAGAACCCTGTGTCTGTAACCGGAATGCTTGGTTACACCCTCACAGTTA
TAGGCGTCATTCTTTACAGTGAATCCAAAAAGCGTAGCAAACCCTAAGTTCCTCCCCAGA
AAATCGTACATATGGCCGTCCTTTCTCAGTCCGGTCGGTGGTGCCCAGAGCTAATATATG
ACGGGGAACTACATCCGGGGTGATTGCAACAGATTCTGTGATGTATGTAGCCGGATAACA
AGGGCAGAGAGAAGTCCAATAATACCTGTAGTTTTCCCTTGGATCGCAGAGGCACTTTGT
TTTGCTAATGGAAATGATCAATAGAATACAATTTTTTGTGTTTAGAGAATTGTGGGCCGT
GGCTCACACTGCCAGCATTGGTTGATACGCTTAGTTCTTGGAAATTGTTTTCCGTTATTC
ATCAGTTATTGTAAGTTCATGACTCCAGTTCTCTTCTTTTGAAGATTGCATGTACCAAAC
TTTGCCAAAGAACCCCCTAATATATTATGACACTGAATTTAGTGACTCTGTTCATTTTTC
AAATTAGTCACAGTTAACTGTCGGCTACTGATTAATGTTCTTGCCTGGTGAAACTTTGTA
AGGGATAATCCTTAAGCCTGATACTGTGTTGCCTGGTGAATAATGTCATCTCTCGGATGT
GGCCATTTGGGGAACGATTCCATCAAGTGTCTTAAGGTTTTAATTCTGGTGAATTATTTC
ATGTGTTTGAACTTTGTCATGTGTATGACTCAGGTATCCATCTCTTGATTTGTCTGTAGG
AAAATTTCAAGCTAAAACTTTCTCCACGACACACTTTCATGGAGGGTTGTGCTAGAATAT
AGAAGTGCATGACAAATTGCATGACTGCAGAGCCCCGGTTGTGCTAGAAAAACGATGTGC
ATGACAAATTGCATGAGTGCTGAGCCCGGGCCGATATCAAGTTCTTTTCTCTTTACACAT
TCCATGCCTAAATACAGTCGGGACTAAAGGCTGTGTTATTGTTGTTGTATACATTCTGTG
ACTAAATACAGTTGACTAGCCAATTCCACAATCCTACGTATACGATATTCTGCCTTTACG
TATGAGAGCGGGTAATGACGCTCATTTTAACAGGGTTTTGCGTTGCCGACAATGTGTGAT
TGTTTTTTGGTCATCAACAGGTTTTCTCCCCCCTGAGAGGATCTCTGTCATAGTTATATT
TTCAGATTATAGACACAATTTGAACAGCATATAAGCAGTTTAACAGTGTGATACCAAGTC
TACCAACTCAGGGAGCCCAGACATACACCATTGCGGGCTCAAGAGAATGACCGAAGATTA
CGACGATTTTATTCAGGTTCGCTGCCCCTTGCAGCGATTCGGACTACAGACGCTTGGTAA
AAGGGTTTACCACTGAAAATACGTTGGTAAACGAGCGAGAGAGAGAGACGGAATGAATGT
TTTGTTACAGACTTTGCTGGGCCGTGCGCCCACCCCATGGGCGCACAGAGTTAGAGGGAA
TTGAACGAATGCAATAGGCGGCAAGGCTGGCTAGACCACCCGACGACGTACGTGGACGAG
CGCTTCTTCTTCTTCTTCTTCTTCTTCTTGTGCGGCTTGTTATAATCAGAAAGACAGATC
GGGCGAGCACCTCCGGCCTCCTTTTAACTCCTCGCACTGTCACCGCGCCTTCAGCTGCAC
CCGGCCACCTGCTCCACTGCGCACACGTACGTACAGTGCAAAAAAGATCAGATCTCGCGG
CAAAATTGCAAAAGAGTGCTGCGCTGCACGTTGGTGGTTGGTTGCTAGCTGCTGGGACAT
GATGTTTTAGCAGCAGTACTGCTGCTGGTTTTCGTTCGTTTCACTCTTCCTAAATTAATT
AATTAATTAATCCTACTACAGTGGCAATCTACCACAGTAGCTTTGAGACGACGAAGTTGG
TTACCTTTGGGAGGCAGCATGACTGTGGGCTTGGAGATGATGGCGGGCACGGTGGGCACG
GCGGCGGAGACCGGCGGGAAGTAGTGCGCGGCCGGGACGCCCAGCCCCTGCGAGGCGTGG
TAGTGGTGGTAGTGATAGTAGGGGTACACGGGCATCATGCCGTTGGGCGCCAGCATGCCT
CCCTGCGCCGCCGCCGCCGGGTACGAGAAGTGACCCTGCGGCTGCATGTAGGGCCCGCCC
GCGCCAGGCGCCGCTGCCGCTTGGCCCAGCTTCTGCTGTCACGTCACAGATGCAGCCGTT
AATTCTCGATCTACTATGAGTGGCACTGCAGCATGGTACAGTACAGTAGTAATTTTGTTA
GGTAACTTACCGCGTTGTAGCTCAGGTCGGTGACGTAGTTCGGGGAGTAGCTGAATGAAC
ACAGGAAGCAGACAAATCAGTGGTCAGTTTTGTAAAAAAAAAATTGAGATGCAGTCAGTT
TAATATTGATGCTGTAAAAACAGGACAGAGAAAGGCAGATCGGGTAAATTAATTTTCTTT
TCTTTTATGTGAACCTTTTTCCCTGCTGCCGTGCAGGCCGGCACGTGGGCACGTGAGAGC
ACGACGAGGCAGCTGGTCCGGTCCAGGTCCAGCCTGTGCCCGTGCTTCCCTTGTCGCGTC
GCGTGCTGCGAGCCACTGCCGCGCATGTGCCCACGCAACCAGCCGTCCAGCCCCCACCCC
CGCTGACGGCCGGGGACCACGCCGCCTCGCCGGCCGCCTAAACGCAGCGCGACACGCGCC
GGTCACGCTCAGCCGCCGCCGCCGCCGGACACGAATCCTCGTACTACGTAACAGAGAACT
CACGCGAGGCGCCGGCAGTCTGAAAGCACTGCCGTCGCGGAGCTGTTGCTCACTTGGCGA
GGAGGAAGAAGATACGTGAGGCAGGAGGTGCGGCTAGGATGCGACGTGCGTACGTACCCG
TAGTTGGCGGCGGCGGGGTAGAACGGGAGGACGCCGTGGTACTGCTGGTGGGCGCCGTGG
CCGTAGTGCGCGGCCTGCGGCGGCGGCGGCGGCGTCGTGGAAGGGTGGTAGTACCACGGC
ACCGGCGACACGCCCCTGGACCCCACCGCGATGGCTGCTAGTTAATTGGGGGAAGCCATG
TGATCACCCGTCAGTACGCGCGTTGGCAGCAGTAAGTAACAACTGGCTGCGCGTGTGTAC
GTACCTGGCGCGGGCTGGTGGTGCGGGGACGGAAGAGCGGGCATGTGGTGCGGCGCCGGT
GTGGTCGGCGGCGAGGGGCGGAGGAGGTGCGGCGGCTGGGGCCGCGGCTTGGCGCCGAGG
GACGCGAGGTTGCAGTTGGCGCGGCGGCCGTTGATGACCGGCGTGCCGTCCTCGCACGCC
TTCTTGGCCGCATCCGCCTCCTTGAACGTCACCTGTTATGTTACATGCAAACGCGTTAGA
AGCCAGCATACCACAGCCATGCATGACAATGTTGGAGGGAAGGGACTGACAAAGCCGTAG
CCCTTGGAGCGGCCGGTGAGCTTGTCGGAGATGATGACGGCCTCGAGGATGTCGCCGAAG
CGCTCGAAGTGCTCGCGGAGGGTGTCCTTGTGCGTCTCCCACGCCAGCCCGCCCACGAAC
ACCTTGGTCAGCGTGGTGTCCCCGAAGGCCGCCGCCGGCTGCACCTGCTGAGGCTGCCCC
AGCATCGTCATGTCCGGCCTCTTCTTCCGGCTAGCCTACGTGCCGACCTCGACGACGCAA
CAAGAGGATGGAGCTGAATGGCGATGCACGACGGGGTGGCGACTGGTGAGGAGGCTAGCC
GGGGTTTTTATATAGACCGGAGTTTACAAATTACAACTCCGAGGGTGGAGGGGTGGGGGG
GGGGGGGGTGAAATTTNGTAAAAG
