| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_135214
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4518 |
1 |
1588 bp |
MLOC_4518.1 |
Available |
Available |
LOC_Os03g16670.1, FRAME:-2, EVALUE:3e-162, 13103.m01979 protein haloacid dehalogenase-like hydrolase family protein, putative, expressed |
CDS Structure of MLOC_4518
Contig Sequence (5860 bp)
>contig_135214 5860 assembly3_WGSMorex_rbca.fasta
AACTGTGCGCATATCAGCACCCAAAAACGTTTCCTTTCCGTTGGTTCAACGCCTGATAAA
ACGATGAACAGTTCAACGGCGATACGTACCTACATATAACTTTTCATGCGAGAAAAAGAA
ACGTTTCTCGCGGCTAAGCTGTCATCACGGGACTCCCTGGTCGCCACGGTTCAATTCAGA
GCGACGGGCGGCTCCTGTCCCTTGAAGCTCCTTTGTTTTAATTTCAGCAGCGACCGAGCA
ACCAACTGAAATAAATCGAACCACCATGCACTATGAAGCGGCTTGTGAACCCTCATGACT
AATTTTCTTTTAGGAAACGCTCACGACTAATTAATACAGCTATTGCACTAAGTCAATGAG
GGAGACCTCATCATGAGCTGCTTTCCACGGTACTACTTCATGTGATTCACGCTGATGCTA
GAGAACTGCTAAGAAACTCGGCCCGTTGTTGACATCCGTGCGTGCCTTCCGTGGCCATCA
TATGTTAATCCCTACCCCTGCTAATTAATCGGAGGGCCAACGGAGCTAATGAAATGAACA
TATTGCCATTTCTCCTGATGTCATTGGGGAACTTGGCGTTGTTCTCAAGCTTGTTCACTA
GCGCCAGGTCGCCGTTAACTATTGGTCCATAAGCCTGGCGAGGAGTATAAAATAGGAGGA
GTGGCTCCGGTAAGTATCACGGGAAAGCGGCCTTGATGTTGTGACATTTCTGTAGCCTTG
TCTTGCTGCACAACTTGCACGCTGAATATTGCCTCTTTTAAGCTCCCAGGTCCTAGACTT
TAACAACTGCTAGATGACACTGGAGGTCTCGTCAATCATGTCATTTGCCCATTATAACTA
GTACGGGCGCTCTTGTCTGATTCCCTAGCATCACAAAGAAGAAGAGAAAGTAGGATCTAG
GCCTCTTGCACTCTAAAACTCTCCTAGTTATATTGATCACAGCATCAACAGATCATTAAT
AATTCACCCTGGAGCCACCATGTAATTTCAGTGATGCACACCCTTCTCCCTCATCTTGTA
GCTAGCTTACAAGCTTGGTCCACATACATAAGACGATGTTGACTTACCAGAAACCAGGTA
ATTACACCGTAAACCATACTTAACCCCTCCGTATTTTCCTCCCCTCGTGTCACATCCGGT
TTGTAATCTAGCATCCAAAGTCTGCGAGTGACCCTAACAGCCCATGACCTGGAGGCTCTT
CACATGCTTCACGCACGGTCCCTTCCTCTTTCCTTTTTCTCTTTTCTTTATGCGTGTACA
CGGATGCTTTCCAGGTCCAAGCAGCAAAAGCTTGCAAGCCAAAGGCACAAATAAGTAGTG
GTAGCTTTTGGCGTATCACGACGTATCCTAGCTGCTGCTGCCATACACGCGGAATATCCA
CAATCTCCTAAGGATTTGGCTCAACAGGAGAAATGAAAGCAAAGTGAGAGACACGAGCGT
GCGTGTTATGCAGAGGAGGAGGCACGCTCATCATCGTGTGGCCAAAGTCCTTGGTTTATT
GCGTCGGTGAAGTACGAATAACTCGCGTACAAGTAACCCCCGTTTTTTTGCTTATTATTC
ATTCCTCCTAGCAGTAATTTACAAGCAAAGATCTGACTGATCGATACATACTCCATATAC
ATATACATATATTAGGACCGGCCCGGCATGGTGTGCATGCCGCATTAATTCCTGACTTTT
CTGAGCTCCCCCCTCCTCGTGCTGGATACTGTTTTTTCCCGGCCAATGCTGAATTCCACG
TGATGATCACCAGTAGTCCGGCAGGCTCGGGGACGCCGGGTCGGATCGGGTTGCGCTTGG
GGTATCAGACTGAAGGTGCACCGGGAGCCAGCGGCGGCGGCGGCGTCTACGCGGTCACCG
ATGTCTCGATCGCGACGCGGTCGGCGTAGAGGACGTCCTCCGTCTTCTCGGCCTCCTCCC
ACAGCTCCGGCAGCGCCTCCCTGATGTTGTGGATGCTCTCCAGCGCGTGATCCGCGCCCT
TCACCCGGTGTGACGTGCCAACCAGCACCGTGTGGAGGCCAATTCGCTTGCCTGCCTGAA
TGTTGCGCACGCTGTCGTCGAAGAAAATCTGCGGCGAGCAAGCGAGTTTGAGTTTTGTTA
GCTGACTGTCAAACACAAAAGCTGAAATGCTGCGTGTGAATATTTGAATGTTGCAGCTTC
TGGTAGGTGGAAACTAACTGAAACCGTCAAGACTTACCGCCTTGTAAGGGTTCACGTTGG
CGATCCTGAGCGCCGCTTCCATGGCGCCGACGTTGGGCTTGCATAGGACGGGGGTCCTGG
GCAGGTCGTCGGCGCTGCCTAACCCGGCGAAGTGGCCGGCGATGTCGAAGATCTTGGGCG
CCTGGTCGCACTGTGGCAGCAGGCAGGGCGGGTTCAGGGTCTCGAAGCAGATGATCCCCT
CGAAGCAGTCCTCCAGGCCCAGCCTCTTGAGGGCTCTCACGGCATGGATCATGTCACCGT
TGGTGAAAATCTGAAACACATGCGTCAGTCAGGAACTCATTAGCCATTAGCTGGGAGGAG
CACCAAGTTTGTCATAAGCATGGGAAGGGGGCGTACGAGCTTGCGGATGCGCATGTTCTT
GAGAATATGCTTGAGAACGGGGTCGGGCTTGATGTTGTCGTAGGGCAGCCTTCCATGGAC
AAAGCTGCGAGAGGCCAACAGGTAGGGGAAGATGTCAGAGCAGAGTAGCACAAACAGGTA
GGAGAAGAAGGTTCGGCCTGCTCATGTGCGTGCGTACGTACCTGTGGTACTCGTCGTAAT
CGAAGTTGTAGCCAATTGCCCTGAGGCCGGCCATCGTGGTGCCATAGTTCTTATACAGCA
GGTTGCCAAGGTTTTCGATCTTGCTCTCCTCAATACCCAGCTTCTCAACCATGTAGGCTG
TAGCGAACGGCAAAACATGCATTCAGTTCAACAGATTCGCGCACTCAGAAACGAGATGAG
AGGCAGCGGGAGAGCTCAAGAGGCCTTACCTTCAATGTTGGTCTTGACGTGTGATGAGAT
CCCGGAGCTCAGCGGGTACAGAGTGTCGTCGAGGTCTGCAGCAGAGAAACATGATCAGAC
CTTGTGCATTCATTCAGTAAAAAAAAAAACAGAGTTGTCAAAGGAGGAAACACAAAGATA
TACTAAGTAACAAAATTAGAGCAAACGGCACACACATAAATAAACAAGAGAGTAAATGGC
GAGTGGCATTCAGCGGCTTACCGAAGAGCAGGCAGTCGAACTTGGGGTCCTGGACCTTGA
GGCAGCGCTCGTCGAACTCCATGATCCGGACTCTGGTGGAAAGAACTGCAGAAAGGATGA
ATAGTCAGCAGGCCGTTCGATTACCTATCCGAGTAATCTACTCCTAACCATATACCCGGT
TCCATCAGTTTTATCATGCAGATTTTTAAGCTATCATTAAGCCCCCGGCATCATTTCCCC
CCCACCATTGTGACCGACAAGCACGCGGCTCATCGGAGCTAGCTCTCTAAACGGAGCCGC
ATTTGCCGTGAATCCGCGGCGAGGGGACGCGAGCGTACCTACTGACGGTCCTCCTCTGCG
GCAATGCAACAGAGCTCGCGGATGCGAAGGCAGAGGTGTGTGGAGCCTTGCTTGCTTCAA
GAGCGCGCTCGGAAGCGTATGGAGAGAGAGAGAGAGGGAGGGAGAGCGGGGGGAGGAGAA
GAGGAAGGGAGGGGGCGGGCTTAAATAGGGGCCTGCGGTCGGGATTAGCAGCCCATCAGC
GCTATACTACTAGTTAATTGGCCAGGCGCGCGGGGTTGTTAATAGCCTCCAAGGGCAGTG
CCGCCCAGCTGTCGCCCCATGATTGGTCCGGTCCTATCAAACCGTGGGGCAGGCGTTTCT
CGTTTCGTCATCCCTCAAATTACCCCCCTCCGTCCGTTCTGGCCTCGCTTTTCTTATTTC
TTGGGAGGGAAAAGGCTGTCATGTTACTAGTGCTATATTTTTTATAGAGAGGAGATGGGG
AGAATGCGTTGCACGATGACCATGCGTGTACACATGATCCGTTGTATAATTATTATTGTT
AATGGTTGAATGGGGGAAGGGTTAGTAGAGGAGACCGTGGATGGCATTGCTGGTGACGTG
TGGCCTGAGGCAAAATAACGTGACCCGCAGCGCAGACCTGTTCCATGGAAAACGGGCGCC
GTGACAGCTGTGATCGAATGATCCAAAGAAGGAATGGCGGTCGAGACAAAAACTACGGCT
TCAAAACGATGAATGAAATGCTGGTCACGGATTCCCGCAGGAATGGTGAAAATGGAGTGA
TTACGCCGGTGGCAACACACACTGTGCTGTAATAAACCGCTGGAATATCCAACAGGATAA
CACCGAGATCAGGGTCCAGGAAGATATACTTGGGTGGCAATAATCTGGGAAATGGTTGGG
TCAGACGGGGAAAAGCGGGGTGGTTCATGTGGCTGTGTACGCGCAGCAAACTTGGGCCTC
TCCCCGTTTTTTTGAACAACGGATTTCTTCTCCCCCAACTTCTCCTCTGGATCTGCCTTG
CTTCGCTTGACACGACTTCCGGTCCACAAACACTTGTCGAATTCCGCGACGCAAAACTGG
CAATCACGATATCTGGCTCGCCATCTTTTTCCGTATGACTCGCCGTTACGGTAACAAGAA
AATGAATGAAGAAACACGTTTCCGTCGATCGGGATCACGCTAGACTGTTCCGTGACCTGG
GGATTAACACGGCAGCCAGGAAAGAATGGTAGAGGGAGGAGTTCTGGACAGGTTTGCCGC
TGGCGCAAATCATTTGCGCGCCCAATTATTGGACCAAATCATTAGACAATGCCTGTGGAG
GGCCACGTGTCGCCCGATTTTTCTGTCGGGCTAGCAGGCCGACGCGTCATCGCCCGCACC
GTGTACGCCTGTGCGCTCCAAACCTCCAATTCTCAAACACTCATTCACCAAAGAAAAAAG
AATCCAAAGAAATACTACTTGCACACACAAACGCAAGGGCGTGTATGATTTTTGATTGAT
AAAACAATCGATCTGCCATGTGTTCTGAAAATATATACAGTTGACTGTTTCTTAGTCATA
ACTTTGTTAACTAAATATTCCTAAATATATGGTGAGATATATGTTTATTAAGATATCATT
ATTCAATTAAATGCAGGGAAACTTTCAGGGTCAACCAGCCGAAAACAATCAACGTCTTCG
TCGCCTTGTTTAAGGGCCACGTGCCCTCCACACCTCATGCAAGGAAAGACGAGACTTAGA
GCATCTCCACTCACCCCCCCCCCTAACAGGCCTCAGAGGGCGTCTTTTCTGGCGTCGGCA
ACGAAAAATCAGCTCAGTCGCGCTCCTAACTCCTCGTTTAGCGCTGATTTGGGCCGAAAT
AACAGTCGGCGAACCCGAGCCGAACCCAGCCCCCCGGGAGGCGTCGGCCGAAGCGAAAAG
TCGAGTGGGTCCATGCGGTCGGCGACAGATGGGCCTATTCCCGTCGTTTTCTCCCCCATT
CCATTTCCTCATTGCTTCCCCTTCTCCCCTCCCCCGTCGCTCCCGTTATTCTTTTCCCGC
TCCCGTCATCCGGCCGCCATGCCACCGAAGAAGTATACCGTCCCTTGCCCCGCTACCGTT
GTCAACTCCACCCAACCTAAGCACAGGAAGCCGAGGGCGCCGGTGGCCAATCCGACGGGC
ATTTCGGATGCCCAGTGGAGGGCGGATATCCAGCGCCAGGAGGCGGTCACAACCGACCGA
TGGAGAAGGCTCGACGCCAAGAGGGCCAGGGACGCATCGGCGGTCAATAATGGAGAGGCG
TCTCGGGCGGGGATGATGAATCCGCCCGGCCGCAACCCGCGGGCCGTGTGGAGCCACCAA
CAACATGTTGCGTCGTCGGCCAACCTCTCGCCGCCGATGC
