Contig Data
morexGenes
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Map Locations of contig_135182 (4626 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_135182

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4488 1 831 bp MLOC_4488.1 Available Available LOC_Os03g08060.1, FRAME:-3, EVALUE:3e-44, 13103.m30165 protein elongation factor Tu, putative, expressed





CDS Structure of MLOC_4488






Contig Sequence (4626 bp)

>contig_135182 4626 assembly3_WGSMorex_rbca.fasta
TCAACAAAATAGGATAGAACTAACTACATTAGTTAGTTAGTTTATTATTTTATAAAAAGA
TTAAAAGCGTGTGGNNNNNNNNTCTCCCGTTGCAACGCACGGACCCTTTTGACCTTTTGC
TAGTTTCTGACAAACCAGAGAAGAACACAAAAAGATATCCAAGGAAAGTTTTTTTTTCTT
GCGAGAATCCAAGTAAAGATTTTACACTAAAAAATATGCAAGTACATTGTGACACGTTGC
TTGATTACTTTATCTATGTAATCTCTGCATCAACTTTCTAAACATCACTGAAACCTTTTT
GGCACACAGCAACAAGATATGCTGAAAACAATACCAAATATTTTCTGAAGAACCTAGAGG
ACGTAAGACAGATTGCAATTCATTAGTTCTTGCTCAAGCACTTTTTACAACGGATGATTT
GAGCACACTAAATTCTCCAGAAAGGTTTACACTAAAACTTGTGCAAGGTAAGCAAGCAAA
GTATTACATGGACATTATATGAATATAACCAGAGAATCACACTACGTGAGACAGACTGCA
ATTCGTTAGTTAAGCACTTGTAACAACGGACACCAAAATTTCTCCAATTAAGTACATTAC
ACTACAGGTTACGGTGGATCACTCGATGGCATACTCATTTCTTGATGGCAGCCTTGGTAA
CCTCCTTCTTCTCCACACCCTTGATGACACCAACAGCAACCGTTTGTCTCATGTCACGCA
CAGCAAAACGGCCAAGAGGAGGGTAGGCGGCGAAGGTCTCCACAACCATGGGCTTGGTGG
GAATCATCTTCACGATACCGGCATCACCCTTCTTCAGGAACTTGGGCAGCGCCTCCAGCT
CCTTACCAGATCGCCTGTCGATCTTGGTCACCACTCACCAGCTCAGCAAACTTGACAGCA
ATGTGGGAGGTGTTGCAGTCCAGCACTGGGGCGTAGCCATTGCCAATCTGACCAGGGTGG
TTCATAATGATGACCTGGGAGGTGAAGTTGGCTGCCTCCTTGGCAGGGAGTTGGATGCAA
CAAAGTGGGATTAGTGGGCCGCCGGCCACCCACCACTCTCCTCCGCCGCCATCCCCTGTG
ACAACCCCGACCCACGCCCTGCCGTCCGCGCCGCCGGCCACCACATCTGCTGCCTGCGTT
ATTATGCCTGGCTGCGTTTTGGTGGGAATAATCTCGCGGAAGAAGGAGGCGGGAGAAGAT
TTGATTTCCTTGTGCATTCGAGGAAGAGAGGATGTGGATTTCGGATATTGCGGCGGGGGC
AGCCCAAAAGGAGCGATTTTTATCCAGAGCCTGTCTGTTGACAAGTTGTAATCCGGATCC
TCCTCCATCTCCTCTGAATAATCTCCTTTCAAAAAGATATCTCCTCCCTTTTGGACGAGA
CCCGGCCGAGTCGAAGTAGGAGGGTCCGCTTCTAAATTGGCGTCCCCGACTTGTTTTTCG
CCGGCGTTAGTCTGCTTTGTTGTGGCGGTCTAAATAAAGGAGGAGGAGGGGGCATTCGAA
TAAGGGCAGCTCAGGAGTTCGCCGCTGTCACAGATCCAATAAGGTAGATACGTTAAAGCT
GATCCGATCAGCCATGAACAAAAGCGGTGGCCGCAGACGAAATGTAAGTGCTACTTCTTT
TGTTCCTGATGTTTGTCCTTCCCTTCGATTCATCCTCATGGCTAGACTGCTGATTTGTTG
TTTTTTTCCTGTTATTAAATGGTATATGCAGAAATCAGCTGGCAACGAAGCCGCTGCTGG
CGACAAGAATGGTCGTCGCAGGCGGAATGTAAGTGTGCCTGGTGTTTGTCCTTCATCGTA
AGGTTCATCCTCAAAAGGGTTATAATTTGTTGTTCTAACTATAAATGCAATGCAGAAATC
AGCTTGCAACGGAGCAACTGCCGATGACGGAGACAGGCTTAGCAAGCTCCCAAATGACCT
TCTGCTCAATATTCTGGAGAGGGTGGACACACTCGATGCTATAAGGACCTGCATCCTCTC
GAAGCGAATGCTGAAGCTCCCCACCATGCTCTCGCGCTTCTTTCTGAGTGTTAGTTCCAT
TCCAGGCCACCATCTGAAACCACCTCGCATTTTCAGCCAAAGGGAAGGGCTGGCAACGAA
CTGTGCTGTGGCTCATGTAACTGATAACATCTTGCGCATAAGGAGTCCTGACATCACCAT
TACTAAACTCAGAATCAGATTTGTCTTGGTGAAACTTGACTCTCTCACCATTGCCAAATC
GGTTGCCCACGCCATGGCAACCCAGAAGATTGATGCTGCTGAGTTTGAGATTGTAACGTT
GAAGCGTTATGACCTGTGCTCTTCTGATGATCTCCTCCATTTTGCAAATCAGTTCAATTA
TTTATTTGATGCTTGTCCGCATGCATTTGCTGGCCTTACACGCCTGTGGCTGGAAAATAT
GAGGTTTGGTAAACTGGATATTCCTAACATCCTCAGCACCTGCAAGCTCTTGGAGTATTT
GCATTTAACTGATTGCGACTCAGGAATCCATTCTGTGCTGCAAGTAGAACACACTCAACT
TGTTGAGCTTGAGATCGAGTATGGGAAATTTCGGAGAGTTGAGCTGATATCTCTACCAAA
ACTCCAGCGGTTGACCTATAATAATTGGTTCTCTTATGAGGATCCGATGTATTTTGGTTT
TCTACCACAGCTTTCAAAGATGAACCTTATTAAAACTGCCATCCGTTTGGACAAGACTAT
CGAATTAAGTCAGCTCCTTGCCAATGTTCCTTCCGTAGGCGATCTGCATCTGGATTTTAG
AAGTGAAAAGGTACTCATTAATCATTTGAATCATATATATGTCCATTCTCACTCTGTGAT
TGTTATATGTAACAGAAGTAAGTTTGTTAATTTTTTTTCTTCTTTTTTTTCCCAGATCTG
GGTTCTACCAGAATGCCCGGAACTGCTCAAGCCTGTGCTCAACAAACTACATCATGTGAA
TCTAGACAATCTTCCTGAAGGGTGTGATTTAGCTTGGACAATGTTTATTCTTGAAGCTGC
ACCCTCCCTAAACGAGCTGTGCATTACAGTATGGGATCATTGGTGCGCAATGATGACAAA
CAAAGAGTTTCGGAAGAAATATGGTTACTGCAACAAGGCAGATGTGAAGTGGAAGCCATG
TGCCCCGGATTTCAAGCACAAGAATCTGGCTAAGCTCATAATCTATGGCTTTCAACCCGA
CGAGAATTTTATGCAATACATCAGGTGTGTTGTGGAACATGCGATTAATATAACAGAGAT
ATCTCTATACGACAGGAAGGTGTGTGGTCGTTGTGGTGACTTGGATCCCGAGATCAAAGA
CAAGGTTTGCCCATCAACATATCCACGAACTGCGGAGGAGAGGAAACGGATAACTGAGGA
GCTGGATTTGGCTTCGCATGCTATGGTTCACTTCCGGTCCTAATTGAAAAAATGAGATGC
ATGTCATTACTATGATATGTAGTAGTACAACCTTTGTTCGTAAATGTAAGACGTTTTTGC
AAGTCATCTGTTCTATTGTCTTTGTAGCTGGATAATTTGCAATAAACTTAATGCAGTGAG
CTTAATTCTTTGGATAAAGGATTATACAAAACCATTTTGAGTCTAGACATTATGACAAAT
TGCTAAACTTCAATCCAAGGGCCAAAGAGAAGGCACACGAAGAGAATTTTACAATTTGTC
CATTTAATTTTCTTGAAATCGATGTGAGGATAATGAGCCAATGGTTTTGTGTGAATAAAG
CACACACTTAAGACCATCATGTAGATATGTCTCTTTAGAACCGCGGAATACCTGAATAGT
CTAATCAATGGATGGGAAGAGCCACTCACCTCGACTTGATGCGTTCAAGGAGTCTGAGTG
GTTCAGCGTAGCTTTTAAAGTGTGCGAGCCTTAAAATTAGCTACCCTGCGTCACTTGTAG
TACACCTAAAATCCAATGTTGTTAGATTTTAGCAACATAATAATCATAAACTATTGGAAT
TGCTCATAGTTTCGGTTTCAATCCAATGTCTCGATGACCAAGGCGAGTATGCCAAGTTTG
TCAGGTACAAGACACTCTGGAAAACTATCTCGTACGCAACATGTGCTATAGGTTTGTAGT
ATATGTAGTACAATCCAAATGATACATAGAGAATGTGCATATGATAAAGAGAAGTCATTT
CTCTTTGTTGTCATCATAAGTTTCGCTATGGAAACTATTTTGATGGATACCTCTATAGTT
TAGTAGGGTATGAGTTAAACCAGGAGCAATAAAGCATCCTGACATTACTCGAGTACCCCG
AGGGATAGTAAATATGACTCAAGTTGAGCCAAAAATACCTCATCGTGTTTAGCGAATTTA
AAATATCTCCTTTTTCTCAATGAGAGTGGAGACATTGGACTTCCCTGAGTATAGAGTTCG
TGGTGCATATGTCCACAAGGCACATATCATCTTTCATTGGATTAACTCCAGTAGAAATAT
ATATATTGTTGGAAATATGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGGAAACAGTAATACAT
GTGTGTCGTATAACTTCGTNNNNNNNATGTTATACGAAGTTATTACGCACACACATCAGT
ATGTAT