Contig Data
morexGenes
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Map Locations of contig_135171 (6294 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_135171

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4477 3 2243 bp MLOC_4477.2 Available Available LOC_Os01g59520.3, FRAME:-1, EVALUE:1e-25, 13101.m06327 protein cupin, RmlC-type, putative, expressed
MLOC_4474 1 798 bp MLOC_4474.1 Available Available None
MLOC_4475 2 1163 bp MLOC_4475.2 Available Available None
MLOC_4476 1 806 bp None Available Available None





CDS Structure of MLOC_4477






CDS Structure of MLOC_4474






CDS Structure of MLOC_4475






CDS Structure of MLOC_4476






Contig Sequence (6294 bp)

>contig_135171 6294 assembly3_WGSMorex_rbca.fasta
TATATAGATATACTTTAGAGTGTAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTTAGGAACGGAGGGAGTATAAAGCACAGCAACTTCAT
GCAGAAATAAAGAGGACATAAACATTACCTGACATAATAATAATAAATAGCATAAATTAT
CAATACTTTGGTTCAATAATATGCATAAAGCATTCAAAGGAATTTGGGCAATATTTTTAA
ATAGCTTATTTCTACATAAATGACAGATTCCAAACACAAATGGGATATATGGCAGGTGGC
AGCAGATAAATTAGGATGCAGGTGTTTATTGTGTTCTCTTCTGTCCTTGCGTCTTTCACA
GTACAGTGTGTCAATCAATAGAATGACAAGACTTATTTATGATGATGATGAACTTCTATT
AATACCCATGTTAAGTCATCAGTATGGAAACTCATTCAGTTTATTTTCAAGTCAAATAGC
AAAAGACAAACTATCTAACAATTTACATAGGGCATCACCCGGCATATAATTGAATTCAGG
TACAGATATACGGAACATGCACTAGTAAAAATCCTACATCCTCCACTACAGGCAGCAGAA
ACACCAGTTCAACGTAAGCACAGATCTAATTAATGACATTTCACATCCAAACTACCTATA
AAGAACTATTGTCAAACGATTGACAATTTGAAACAGTATATTCAGGAATGGGGGATTGAA
TAAACGACACGTCAAGGGTTTCAATTGAATTATTGAATGGTCCAACATTCTTCAAGTGTT
CTATTATATTCTAAGCCAATATGGACCACCAACTCCGAGCAGACCTAGATTCTGCTCCAT
CACCACCTTTTTCTAACAATACTCGTCCATGGCCACTTTATTCTTAAGGGCCTCTTTGAT
TCGTAGGATTTTGAAAACGTAGGAATAGGAAAAGTATAGGGTTGGAGTGGCATGCCCACT
TGAATCCTATAGGATTAGCAATGAGTGTTTGATGCCAAGGAAAAACAAAGGAATTGTAAA
AAGAGGTTGGAGTGGATATTAGATTTCCTAAAAGGTCCATAGTGTAATCTCTAAAAGGTC
NNNNNNTTAGGAACGGAGGGAGTACAAAATATTCTATAGGAAAAATTCCTATGAGATCCA
ATCCTACGAATCAAAGGCCCAACGTAGGAAAAATTCCTAAGGATTTCAATCCTCCAGAAA
TCCTATAGAATTCCTTTGAATCAAAGAGGCCGTAAGCCTTTTCCATATGTTTACTCTGAC
ACAATAAGATTCCATAGAAAGTAACTAACAGAACAACCCACATTACACCCACGTTGTCGA
TGCTAAACTGAATGGCCAGGGGCTTAGAGCAGATATTTCTTGGCCCAAGACGTAACTAGA
TGCAGCAACACGTCAGGAATCTGATACGAATGAAATGGAAGCATGGTAAGCAAGCCAAGT
GACAACACCTTCTTCAACCACCAGGCCACTACCTTGGAATACTGTTCTTTCAGAATTAAT
ATGGTTCCCTGAAGATAAAAAAGGCTGTGATTACCAGGTCTGGTTCAACGACCAGCAGCA
TGTGGTCCTCCAAATAGCATTGATCCCAAAACTTATTTATTGTCCAATTCCGCAATTCAG
TTCACAGCTACGTGCTCACATATTACGATATGGTATGATGACCGTCATCCAAACAGCAGA
ATGGTGCGCATATTTACCCCGTCCTTGTTCCTGAGATCATTTCACAAGACGCCCGAACAC
GACGCCGGGTGTCAAATCACCGGAAGCCTACAAGCACAAAACGCACACCGCAATGCATAA
ACTCCTCTCCCCGCAGACAAACTGCGCGCCTCTAACGAAAAACAGGCCCAGACCGCGGAG
CGGATTGAAATCGCCACCGCGCAGGCGCCTCGATTGCCATAGGAAACAACGCCGAAACCA
CCAAATCGCCGCGCGCAAACAAAACCGCCACGGCCCCGGCAACGCCATCAGATCTAGGCG
CGCATCGCACGACGCGGGACCAAACCGCGCCTGGCAGGGCGGGATCCGCGATCCCGGGCC
GGATCGATCGGGACGGCGTCCGCGCGAGATCACGCCTCTAATGCGGAAGAGGGGAGGGGA
GGGGGGCGGGAAATCGGTACCGTCGCCGTCCTTGTCGAAGAGGCTGAAGGCCTCCTTGAA
CTCGCCAATCTGCTCCTCGCTGAGCTGGTCCGCCATGGGGCAAAACGGAGGGAGGGGACG
ATGCAAATGTTATGCGAGCTGCGTTGATGGGGCGACGATGGCGTGGCGTGGGGGGGTCAG
TGGGTGACTGGGTGCATCTGTGTCGCGGGGGGGCGAGGCTTTATAGAGGAAGAGGATCGC
GTGGGGAACTAGGGATTTCCTGGTTCCAGTTTCCGGGCATCTGGTTCCCCTTCCCCTTTT
CTCCTTTTCTTTTAAATTTTTTTTGCTACTCCCTCTGTTCCTAAATACAGTATAAGACTT
TTAAGAGTTTCTGTAGAAAAACTACATACAGATGTATATAAACATACATTAGAGTGTAGA
TTCAATCATTTTGCTCCCTATGTAGTCCTCTAGTGGAATATTTAAAAAGACTTATATTTA
AAAACGGAGGGAGTATTTTTATTTTATACTGTACTAGTTTAAGCTGTATTATTATTAATG
GTTACTATATTGCTAGTATATTGCTTGAGAATATTTTCTTTATGGGTTGGTGTGGATGGT
GTGAATGTGAAGCGGGCCTATCAGATGTGAGTATTCTGGAGCGCAAGATATCTTCCTCTG
TATTTGATCTTTTTCTCTCCATTTCATTGGCTGGCTTGTCTATTCCTTCACTAGACTACA
GCCGTACTGGGCCACCATCGTTTTGTGTTTTTCGGTAGTTATTATAGAATTTGTGTTGCA
TTCTTCGCACAAGTGACTTTGTGGTTCTTTGCTTTATAGACATATATATAATTGTTTTTT
AAAAAGAAGGATTGAGGAGCGCCACATGTATAAATTCAAATAACCGCCCTATTACAAAAT
TTCTATAAACTCTCTACTGAATATAGAGAATATGAACTTTATACGAATTCTATCGGATAG
GATTTTTACGGGGAAAAACCTATATTTCTGTGAAGGAATTCTTCCTATCCTTCGTAATTC
ATACTACAATAAACATTAACCCAAACTCAGTAGAAAAAAAATCCTATTATGTGGACCAAA
TGACATCTCTCTTCCTATGACATTTTATTTTCTATAATTTTTCTTTCCCTATGATTCTCC
TACCCTATGAACCAAAAGAGGCCTAAATGGATTTTTTTATAGAAATCCTATCTTATAAAA
TTCCTACAGAATCCTCCAAACCAAAGGAGGGCTAAGTGAAAAATAGCACTGGGTCTGCCT
GAGGACCATATGTTATTTATTTATTTTTGGATTAGGGGTTTGACGTACACATATTCTCAT
GCCGACACTTGTCGAGCTCGGCAATATCAGTATCTTTTTGGATGAAGTTGTATATCCCCT
TTAAAATATCTCATCTCATCTTTGCTGCAAGTATTGTCGATGAAGATCACCACATGCCGT
TGCAAATCCGTGGCACGTAAGAGCCGTGGGGGAAAAGAAATCCGACTTGTCGGTCGATGA
TGTTGATGGCTAACAATCGACAGGAGAAGCAGAGAGGTGTAAGCCAATGCCCAGGCGCAG
GTCACACAAAGAGCTCGAAAGCACAACAGCGTGTCCTGGATACGCGGCCCCGTTTCACCA
AGTGAAATGCAGTGAAGAATCAGGAATGACTTTGCAATCCGTCCATACAAATGGGTCATT
TCCGAATTCTCAATTCGTCAATACAAGGAGGCATGAAATGACCTCTCTGCCAATTAGTAC
TACTCAATAGCACATAGCTCAGCATTTTGTCAATATAAAGAGGCATCTATGATCTGTCAG
CTAACACAGCTCAGAGGCATATGCTACACACTACATACAGAGAAAGAAGATTTCCTGGAA
TATGGAAGCAAAGAAGGTACATCTGTTAAATGCGGTATATTTAACTTGAACAAAGGAGTA
CATGACCAGTGACTATATGCAAGAGAAAAGAAAAGAAAAAAGTAGTAGCAAGAATAACAC
CTTCCCACCAAAAAAGAAAAGGAAAAAAAAAACAGACAAAAGAACTAGGAAAGCCAACTG
GAAGTGTCGCCTCAACTATACACAAGCATCTACCTTAAAATCTTCACCGAGGTGAATTCT
AAAGGCTCGATGCTACTTTCGGTTTCTCCGCATCATATTGTATTAGCGTTTGAAATATTG
TTCACAGTACCATAGGAGCAATTGTGGATGTCAGAGATCTTTCCAGACCTTGTAGTCAGT
ATTTGAACTGTTGGGATTTACTGGTGTGTCTTGGCATCCCAAGAAGAAGGTCGGTCGCAC
ATCCATATTGATCAATGCGTGTGCAGTTGATCTTGCGCTTGCGACAATGGCTACCTCGTC
AGCGGCAATTATGGCTTCTCCATATCCTTCATCTTTTACATCGGGATTTTCTAACTGTTG
ATCACGGAATAACAACCAATCAGCAATATAACACATGATTATCACGGACTGAATTAGTGA
ATGAAGAAGAGAATATCATTACCCTGAATTTTGTTTTTGCGCCCCAAATGACAAATGTTT
CATTGCATGTATGGTGACGATGGTTGCCACGCAAACCACCTGGCTGGATCAGTCCTACAT
GTAGCGAAAGACAGACCAGCGCACCATCTGCCACAAATGAACATTATATAATTAATGTCC
GGTCAAGATACCTGAAAAACAGCCTATGCTCTATTCACATCAGTCCTACCTAAGCTGTAC
CACAGAACTCCAGGCAATCACATCCAAGTAAATATATCATTCCAGAAATCCATTACAAAA
GTGTGGAATCAATGTTTCTGTATTTATGACTCCTCATGTAAATATTGTTCCAGAAGGCTC
GTGTGTAATCCGTGAAGAATTCATGCAAATCCATTACAAACAGCTAATAAGTGACAGTGA
TTGAAATTTCATTTGGGTGAAGAGAATTGGATGTGCTTTATAAAATGACAAGGTCCCACA
AGTTGTAGACTAGCAGTCCATGCCTAATGTCGCCTCACGTGTAGAAGATCGGTAGAGATT
TTCAGCATCTACACAAATCTTTTGAACACCATCAACAGAGAGTAGAGACACTCATGGATG
ACAGCATCTGAATAATACTATACTTTGAGCATGTCAACACAAATTTAGCAACAATTTGAA
CAAAACAAAGTTGCAACGGAACACAGGGATGAACAGCCTCAAGTTCAACATAGTAGCAAC
TGGACCATAGAACAAATTCATTCTGGCTACCAACCATACACTCACAAAAGTCTCAAGTTC
AATACAGGTAACTATGTAAGAGGCGGGGAAATAGTAGTGGCACATGGAAAGTCCTCTTGT
TTCCCAATACAATGGGCATCCATTGATGGAACCAACAAAGGTAAAATAAAGTAAAAAGAA
GGGAAATATTTGTGTAGCAGAAAATTCGCCAACTTGGTTAGAAAGAATCAATCAGTTGCT
ACCCCCATATTGCAAATGTTCTCTTTTGCTACTTTTTTCTCCTTTCGGCCGTAAGGGTAC
ATATCAGTACAATAATTGGGGAATTTGAGGGAAAAAACAAACAAATAGATGGAACTAACA
ATTCTGAATACATGTCTTGTTCATTGGTTGCTTGTCAAAGAAAGCCACCCATCTATCAGT
CTAATATGTGTAGATGGAAAGCAAGTGGAACGATGTAACCACCAAAACATCTCACTGATC
ATGGTATTTGGGACATATGTTAAGTGATGAACTGACGAACACAGAGGTACTTGTATATAT
CGAACTCAAACAAACAATGCTGTCAACGGAAGTGGTACATGCCCAGCTCAACCCAGGCGC
CTATACTGGTTGATATAGCAAACCCATCTTAACAATCTCCAACTAGGATTGCCACTTGGG
TAACAAGATTATTTTGAAAGGTGCAAACCAAGTGGAGCTCCGAAAGGTGTCGACAGCATG
TTTGTGCTGCACTTCCAGTTCCACCAGTGACACGTTCAGAATATCACTTTGTTCTTCGTC
TCACTATAAACTAAAAACTGAGAAAGAGTTGGAGTATCTACTACAAATATGAACTAGGCA
GGCCTGATTTCTGCAATTGATGACACGGTGTAATCTATTCTACATCATCCCTGCCACGTT
CCAGCTCTTATATTAGAGCATCTCCAACAGACGCGCGAAAAGGGGCGCGCACACGGTAAA
CCGCCATTTTAGCGCGCGCGGGACGGAATGGCGCGCTCCAGCGGCGGCGGGAAA