| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_135146
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4452 |
4 |
4539 bp |
MLOC_4452.2 |
Available |
Available |
LOC_Os01g67500.1, FRAME:-3, EVALUE:0.0, 13101.m07334 protein armadillo/beta-catenin repeat family protein, putative, expressed |
CDS Structure of MLOC_4452
Contig Sequence (5973 bp)
>contig_135146 5973 assembly3_WGSMorex_rbca.fasta
ATTTTGGAACGGAGGGAGTATGTATCAATTCTAGAGGAAAATCAGTGGCCGGCATAACAA
AATAAGATTGTATTCACACTCTGAAAAGGATTGTATTCACATTCGCCGTGAGTATTCAGT
TGCCTCGAAGCAATTGTCGGCGAATCATATGTCTATCAGCAAGCTTTCAGAGTAAGATAT
TCCAGAATTCATTTTAAGCCGAACGCAGTGTAAGTTTATGCAGTTAGATTCCCTGACTGG
ATCAGGAGTTACACACGCGAAGCTTATTTATACATCAGCCCCGAAGAAGATCGAACGACA
GAGCAGCGAACCCGGACTGAACTTCCATATGTGCTATACTGGGGTCTGCCAACTCGAACG
AAATCGAGTTGTGGAAGATGTCGGAATTTATGTGGCTGCGCTAGAGAAGTAGTAGAAGAA
GCTTACATAACGCGGTCTCCGGGTAGCTACGCTCCTCTCCTGCAAATTGACGGGAAGGAA
CGTTGGTTCCTCAACTCAAAGAGCAGGTCAAATGTTGTCGGATTTTGCACAGTGTTGTAC
TAGCAACTTACAGTCTTGATTGTGTCCTTACAATAGATGGCTGCAGCGCGTCGTAGTGCC
CGTAGCCGTCGTAAAGAACTCGGACCGGGTTGTCCTTCCCATACTCCTGACCATACTCTG
CTATGATCCTGGGGCTGTCAGCGCCCTTGGTGTACATGTGGACGGTGATGGGCATCCTGC
AAACAGTGTTGACATTCCTCGGTAGCAATTATGTTTCAGAAGATAAACCTACAGATTGAT
CACATAAGAAAGAAAGGTGCCTACCCAAGAACATGTGAGCACATGAGCAGTTCAGGTTCT
CCTCCCCAGGCATGAGGCTTCCTCATCTTGCGCACATAGCTCTCGAAATTGCCTTCGAGG
AACCTATCCATCGCATCGAAGATCCGCATCGAAAATGATCATGTTACTTTTGTTTTTGCA
GGAACAAAGAAGTTCATGTTTAATTCTCTTATTTAAGCATATGTTTTTTGCAGGAAACAA
ACGGCTCAGATGTAAAAAAAAAATGGTAAGAGGAGGAAAGAAGACTTCACCATTCGGTAT
CTCCTCTTCGCCTGATGAACTCATCTGCAACCTGGAACAGGTCAACAGGCGGGTCAGCAA
TTTCTTTCGCTAAAATTGCATGGAATGGAACGGAATCATCAAGTGATGAAGCGGTTGAGC
AGTCACCTTTGCTCGGAGCTCGTCGGCGAGTTCCTTCTGGACGCTGTCGCTCGGCGACTG
CTTGCCTCTCCTTATGCAGGCGCCGTAAGCGACCGACCGGAACAAGCATCTCCCGTCCCC
TGTGATTCCTGAAAAACGTGAAGGGCAGCATAACTGTATAAGCTCAGTTCCCAATGTTCA
GAGATGCAGATGGCCTACTCGATCAGCCTGAACACCACATCAGGATCAACCATTTGGAGA
GTTTCACAGGAACAGACAGCCCCGTAAGCTTGATAGATACCCAGTTACTAGCACACATCC
AAGGTAGGGTCACCCTTTTTCTTCTTTTTCATGAAGTACAGCTATGTATTGATCTTCCTT
GTTGAATATATAAAAGGAGATGCATAGATGGATACCCAGTTATGCAAAGGCTGCTGCTCT
AAACTAGCCATGCAGTAGTAGAGGCATACAGAGATGCTAGCAAAGTAGAGGCATCTTAAC
CAGCCGATTAGTTTAATACCGCTTCAAATCAGCACCTACATGTACTTTCTCCCGCTCTTT
TCTCCCCTGTAGACCAGGCTCAAGATCCTACTGATCACAGAATTGCGTCACGTCATGATC
ATCAACAAAACACAAACCCCCTTCAGAACAATCCCACATGGCGAAAAGAAGGGGGAAAAA
AAAAGCTCTCCTCCTGTGATGATCATCACCAAAACGACCCCCCTTTTTCATCTACCAAAT
AATCAATCAAAGCTGGAGAGGCAGAGGGGCGTACTTACGGATGGATCGCAGCGGCGGGAG
CTCCCGGTCCGACATCGGCGACGACGGCGGCGGCGGTCGGCCGGCCCTCTTGCCCCCCTT
CCCCCTCCTCTTCCAGGGAAAGGAGGGGAGGCAGGCGGAAGGAATAAGCAAAAAAAGCAG
GAACGGAGAGCGAGAGGAATGTTATCGCTGCACACGGAACGGAACGGGAACAAAAGCGGG
CGGGGTCGAGGGAATCGGGTTCGCTTTTCAGGCCCCTTTTCTCCCTGTCCCGGCCGCCGG
GGTGGCGGCGTGCCGTCCGTCGCCGCCGCCGCGTCCCATCGAGCCCGCCCGCCGACGCCC
ACCGACGGCCGCCGCCCCCCCCCTCCGCGGCTGCTTGCTTGGTTTCCCGCCACGAATAAC
CGGGACCTCCTAATTAAATCCCCTCCGGAGCCAGCGGCGCTTCTCGGTGCTCCTCCCCTC
CTTCAGAACCGGTCGACCACCAAGTGAAACTTGACGGATGGTTGGCAAAATCTCCTGCTC
CTGGCAGAAGCTAGAAAGCACAATCATCCCGTGCGAGTAACGGGGCGGCACGTGATGAAT
GAACCCGACTCATTCGTTGGCGCTGTCAGACGCAAGCCGTGGTGGCCGGTCCTTTCTAAT
TTTTCTCCTTTCATGCATCCATTCAGGTCGGCCCTCGCCGTGTCAGTGTCATTTTCTTGG
CGAGTCCTCCGCATCTTTTCACCCATCAACAGCGGATAATCGGTGACAGGAGAAAACGAA
CCCACCTGGATGAGCAAGCAGCAGGATTATCGTCGTAAGAAAGAAAAAAAAAGGATTAAA
TCTCCTTCACAGATCATGGGGCCCACGTGTCAGTGAGCAAGCAGAGGATCGTCGTGTCGA
CCAAAAGGAGAACAAACGGTTGCTTGGCTGAAATGGAGAGAAGCATCTATCTGATAACAA
GGCAAGGCTATATATACATTGTACAATGTGATGCGATGACAAGGCGGCAAGAGGGGGGAA
ATGCCCTACATCACCCCACCGAGGAGGGGGGGAAGAAGCACTAGTCTCTTTCAACTTACT
TAACCCAAACGAAGGAAGCAGCAGCCACGGCGCCAAAGTGGAAGAAGAAGCAAGAAAAGA
GGGGAGATGTACAGATCCTACTGACGAGCCAGACCCCAAAAACCCTGCCTGCTGCTGCTA
GCACTGGTAGAGGGAGAAGCCCCGGTTCTTCCACAGCGAGCTCAGCGTCCGCCCCAGCTT
CCTCGACTTGGACTTGCACAACGGCTTCGACTCCCGGTGACACACCATCACCCCGCCGTT
CCCGTTCCCGTTCCCTCCCTCCGGCGCAGCCTGCTGCTGCGGCTGCGGGACCTGCTGTTG
CTGCGACGCGGCTTGTTGCCCCCCGTCACGCTGCCGCTGCTCCCGGAACAGCTTCAGCAG
CTTCTGGGCCTTCTCCCGGCCCCGCCCCGTGCCGGTCGCCGAGACGGAGACCAGCGACGG
CACCACGCCCTCCTGCAGCACCGGCGCGATGCACTTGTCGTCCCCCGCGCACATCGCCAG
CAGGCACGACACCGCCTGCTCCTGCTCCGTCGGCTCCCCCGTGTCCAGCAGCATCGCCAG
CGTGCTCACCAGCCCCGGGGTCGACATGATCTCCTTCCGACCGGCCGGGGTCGCCGCGAG
GCTGATGGCCACCGCCAGGGCCTTCTCCGTCCATCCGATGCCTTCCGACACCGAGGAGTC
CGTCAAGAGCGTGTGGAGCGCGTCCACGATGCCGGCCGACAGGAGCGACGGGATGCTGGC
CTGGTGGGTGGAGAGGTTGTACAGCGTGTAGAGGGCGTCATGCTTGCAGGAGCTGGCTTT
CGGGTCGCTGGCGTCGTGGTTGTACAGCCGGTCCACTAGGAATGGCACGGCTTGGGTGGA
AGCGATCACGCTCTTTGCATCGGTGAGGCAGGAAAGGTTAAGGTAGAGCGCCGTGGCTGC
AGCAGCTAGGCGTGGATTCGACGTCATCTGCTCAAGTAGTTCCACTATTCCAGCAGACAA
CAGAAGTCCCTTGTTTCTGAAATAAACAAGCATAGGGTTTGGTAAGCAAAAAATGGATAT
TCGAATGTTCAAAGGTCAACTAGCTGCAAATGACAAGCACCATTTAACTGAAAAAAATAG
ACTTCATACCTATTATTATTGACTGCAAGGTTGAAAAGAGCCATGGCACCAACTTCTTGT
GCCTTCTCATTTCCTTCTTCCACGGAATACCTTAAGAACTGAACTAGAGCCTCAGCGAAC
CCATTTGAGCCCATCTGGATCCTTGCTTCCTCGTCGTCTTTCAGCAGATATCTTATCTGC
TCAACCAATCTGCACTGGCTCAGTATGTTGTTTCTTTCATTAAGCACCAGCAGCAAGTTC
CGATACCCCTCATTCATATCAAACTCAAAACAAGAGCTATCATCCAATGTGCCTGATTCG
CTGTTTGCCGCTTCTTCTTTTCTCTCGTTCTCCAGGGGAACCACCTTGACACCCTTGATG
TTGCTAGTGTCAAAACTATCAACAGACACACAGCCCGTCGCCTGGGAGTCAGTTAAAGCA
AGCCTCCAATTTACATCAAAGGATCCCGGTGGACCATCTGGAACTGGAAAATCATTCTGC
TCGCACCAGCTGGAAATCATGGCCTTAACACAGTAGTTTGGAGTCAAAGACAAGTGGGCC
AGTTGTTGCTGAGTCTTGGGACATGTGCTGTGACCATCATTAAACCATTTTTCAATGCAA
ACACGCTCATAAGTCTGACCAGACGAAACAATAACCGGGTCATACATCAGCTGCAAGGAA
ATGGGACATCTGAGCTCCTCAGGAGGGATCGACATGTTTTCCGACCTTGGACCACTAGGT
CTACAATTGAATGACCCAAGCCTCGAATTGAAAGACCCAAACCTCGAATTAAATGATTGA
ATGCTCGAAAGCTGTCTACTGAATGCTCGGCTGTTACCGCAGGTGCCATACATGTCATCC
ATGCCTAATACTGTAGGCGAACATGGGGCTGATCCTTGAGAATCGGTATCATCACCTGCT
TCACTTCTGAAAAATTTCGAGTATTTCCTCATGAGATTGTACAAGTAGGACACAACAAAC
TCCTTCCGCTTATCATCTCCAGAACGAGCCTTTTCAATTAGCTTTTTGAGGGCTCTTCGC
TCAGTCAATGCTGCCCTGGAAGAAGTAATTCCCAGCTTCAGAGCAGCCATATGAAAGACC
TCAAGCTCCCCACTATCGCTGGAACTGTTCATTTTGCTGTTTCTCTGGAGCAAATTGATG
ATCTCATCGCCAGCTTCCTTCTCTGATTGATCCAATGTAAATACAACCTCCTCCAACTCA
CCGATAATCTCTACAATCTGTTGCGCATAGACGAGATCAGGATGTCAGGATATACCACAC
AAATTTACTAAATGGTTTAACCATAAAATAACTGGGCATAATGTGGGATTTGTAATCCAA
GGAAATCAAACAGAAGCACACTTAGTTCTGCTAATTATTAGAATTTTGCACAGCATACCT
TATGGCCAATATCTTCTGTTACTATGCTTTCTACACGCCTGAGACTTTCCTGAAGTTGGC
TTCTTGATTTCTCAAACTTCAAATGCACAGTTTCTGCAGTGATGGCCTGAAAGTGAATAT
TATCACTTTATCAGTGTAAGAGTTTGGCATTTTAATTATCCTAAAGACACAAATATCAAA
AATAGCAATGCCGCAAATGCCCCATGGAAGGTTTGCAACTAATTATATCAAGAGTGCTCT
GCAGGGAGGGGTAAAAAATCTTACCAGGTACAGCCGGCTGCAATCTGCACAATGTTGAAG
AAGACCTTTGGATTTATCCAGAGCAACATGCAGTGAACAAAGTGCCTGTATGCCAGACTT
GCTTCTGGGCCTTGATGCTTCGATGAACGGGAAAATCCCTAGAAGTTTAGAAACTGCAGG
ATGAAACACTCTGCACATTCCAGCGTGTAACTGCAAAAAACACAATTTCTTCAAATTAGG
CAGCCATACACAACACCCCCCCCCCCCCCCCCC
