morexGenes - Barley RNA-seq Database

Contig contig_135134
Source Contig contig_135134
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_135134 (7709 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_135134

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_4447	2	2577 bp	MLOC_4447.2	Available	Available	LOC_Os03g16920.1, FRAME:-1, EVALUE:0.0, 13103.m02017 protein DnaK family protein, putative, expressed
CDS Structure of MLOC_4447

Contig Sequence (7709 bp)

>contig_135134 7709 assembly3_WGSMorex_rbca.fasta
CTCATGTGAAAGGGGTCAAAAACATGAAAANNNNNNNNNNNTGGCACTTGACACTAAGTT
AATAAGTTAGTCCCAAAAAATATATATAAGACATGCAAAACATCCAAAGTATGACAAGAT
AATAGCATAAAATCATCAAAAATTATAGATACGTTGGAGACGTATCAGCCAGCCATGCGA
GCGACGTGGCAGCGCGGCATAGGAGCTCCCGACGTATGCGACAAACGATATTCCTTATTG
GTGCCACAAGCGTTTGTTAATATGCATTTTTGTTAACTCGCGCGTGTGGCGTTCAAACTG
GACCGACCCATCTAGGCCCTTGTGATATTTTTTTTGGAAAATTCTGTGAACTTATTTAAA
TATCAATGAACTTTTTAAAAATTTCAAAAAATAATTTTTAATATTTATGAACTTTTTTGA
ATATCAATGCACTTTTTTGAAATTTGATGAATATATTTTTGGAAATGGATGAACTTTTTA
CAGATTTACCATTTTGTTTCAGTTTAATTAACCTTTTCTATAAATTCATGATCTTTTTCT
GACATTTTATGAACTTTTTTCAAGTTTATTGAACTTTTGAAATATTTAATGAACTTTTCC
TAAATTGGATGAACTTTTTTAAATTTCAATGAACTTTTTTTTCAAATTCATGATTTTTCA
AAATTGATGAACCTTTTTTAAAGATATAAACTTTTTTTCAAATGGATGAACCATTTTCTT
TAAATCTGTAAACCTTTTTTGATTTTACAAATTTTCTCGTAACAAAAGAAATAAAAAAAA
GGAAAGAAAAACAGGCAGCACTCTAGTGGTCTAGCCCATGCTAGTGGCACTGCAGGCGCT
GGATCGTTAATGGACGCGTGTGGCGCTGCATAGGAGCTCCCGCGACAAACGGCATCCCCC
CTCCATGTGAGAGAGAAGTAAAGTGATATATAACTATTAGGCCCATGATGTACTTATAAG
TCACTAATAAAATACATCCCATTAGGCATTCAACCATTTCCCCTAAAACCTATATTGTGG
GGGAGGGGGAGTGTTAGGGAATTAAGCACTAGCTAGCACATCACCTACAATCAAATTTAC
AAAAAATATAAGTTTTGGCTCCCAAAAAACCATCAGAGATGATTTTTTCCAACTAGTAAA
CCATGGATATGGTGTTTTCGCACCCGAGCTCACATGCTCCCTCATGAACAGTAAAATTGG
AAAAAATAGTAAAGAAACTAAAAAAATCATTTTTTTGTGTGTGATAAACATTGACGAATG
TTTTCACTGCGCGAAAAAAATTGTAACCAAATGACATTCGTGGTAATGTGGGCAAAGAAA
CAATATTGATGCTTCAAAAAGACTATTGTTGGAAGCATTTTGGAACATCCATTTTGTTTT
TTTGCCCACATTTCCACGAATGTGATTTTATCACAAATTTTTGCATGCAGATAAAAGTTT
CATCAATGTTTATCACACAAAATTTAGGATTTTTTGGTTTTTAGTATTTTTTATCTACTA
TTCACGAGGGAGCATGTGAGCTCGAGCACAAAAGAGCACCTTCGGTAATCCACCTCGAAA
TGTATTAACAACTCGACTCAAACAAAATCAAAGTAATAAAATCTTACATGCAATAATGAA
TTTGTGGCATCGGTATTATCCTTAAATAATAATAAAATAGAATATTGTATGAAATAAATG
AATTAGAGGCATTACCCTTAAGAAGAAAGAAAGTAAAAAGAAACAAAACCAAAACCAAAA
TAATGAAGATCTATAAGAAAGAGCGAATTCGTGGCAATTGCATTACCCTAGTTTTTTATG
AAGGAATAAATTAGTAGTAGTACCAATGAATTAATAGTCTCTAAGAAGGAAGGATTAATG
GTGTTGGTATTGCACTTAAAAAGGAATAAATGTGAAGAAATAAACAAAACCGTGACACAT
TTTGCACACAATTTACTTGGAAATTGTGATTTTTTATATATGTAAGAATAAACATGTAAC
AGTGATAATTTCACAAAAACAAGTTTCCTAGGAAGGAATTAACTAATGGCATTGTTATTA
TCCTTAAATAAAAATGAAAATAACATAAAAGCTAAGAAACTTCACAATAAGGATTTTTGT
AAAAAATAATGAATTGTGACATTGATATTACCCTTAAATAATAAATAAATAAAAACTAAA
ACAAAAAAACTAACGTATTATGAAAAAGAATAAATTAGTGACATTGATGTTACCTCAGAG
AAAAACAAAGAAATTAAAACTAAAACCAAAATAATAAAGTTTACGAAACAGAATGTATTT
GTGACATTAGTAAAAAGTAAACTAAAAAATATTAATAAAATTTTAGGAAAAATAATATAT
TATTAACATTGGTGTTACCCTTTTAAAAAATAAAAATAAAAATAACTAAAACTAATAAAG
TTATTGAAGGAAAGAAAACTGGAAATCGAACAAATGGTGACAAAATTTTCACAAAAAATG
ACACATAATTTGTGACTTTTCATAATATGCAAAATTAACCATATAATAATGATTTTCTCC
GTGAAGAAATAAGTTCCCAAAGAAGGAATGAGTTGGTTGCATTAGCATTTTACCCCTATA
GAGGAAATAATAATAAATTAAACTAATGTAAAATCAAAATAAGAAAGTTATAAAAGCATA
AATGAATGTGGGAATAGCTTTACCCTTTAAGTAATAAATAAAATGAAAAACATGAATAGA
TGAAGATAAAATTTTGTATAAATGTACACATAAATTACAATTTTCATTAATATGCAACAA
TACCCATATAATAGTGAAATTTTCGTAAATAATGCGTTTCCTGAGAAGAAACAAAGTAAA
AATATATATAATTAAGTTTCTCTAAGAAAAAGATGAACTAACTTCCTTAGTATTTTATTA
GAATTGCATAGCCGATTGTTGATGATGCTCGCTTTGCATCTGGTGCGAGCATTGTATTTG
CAAGATTCTTAAATTGAAGGAATATCAAAATGCAGGAATTGAATGACATGTCCTATAGAA
CCCTATAGGATTTAATAGAATGTTTGATAGCAAAGAAAAAACAAACAAAAAATCTACAGA
GAGGAATGGAATTTTTTCTTCAAAATATAATATTAATGGATACTATTAAAAATTCCTAAT
TCCTAAGGATTCGAAACAAACGTTCGTTCACAAGGGTACAAATCCTCCAAAAGTCCTATG
TAATTCATTTGAATATAGGAGCCCTTACTGGTTGTGCTGACCAGGAAGGTTGATTTTGCT
GCATCATTTGGCTGATGACAGTAGCTTTGTTATGCCTTTCCAGTTTCATCAGGATTGGGT
TCAGTGTGAGAATGAAATATGATCCCTGACCTCTGGAAACGGGAGAGAAGAACAAATGTA
TCCCGAATCAAGGACAACGAACTGATAAAAATATTTCTCAGCTCCTGAACTTAGGCAAAA
ACAACACAGTACAAGAACCACATGTGTGTATCGTTCCTGCTCTTACACGTTTATTTTATT
ATTTCCTCTACTAACCTAGTACTACATCGTTATAACCAAACTCATCCAAGCACCCTCGTT
CTTCGACAGAACCACACGAACACACGCATCAGAACATTCTAAGCACGGCATAGCCGCGTC
CACTCCCAGGACCTGTCACGACTCGCTTAGTCCACCTCTTCGATCTTGGGCCCGGCACCG
CCCCCCCCGCCGGCGCCCGCGCCGCCGCTGGGCATGTCCTCGTCCATGCCGGCTGCGCCG
CCCGGGCCGGCACCTTGGTACATCTTGGAGATGATGGGGTTGCAGATGCTCTCCAGCTCC
TTCATCTTGTCCTCGAACTCTTCGGCCTCGGCGAGCTGGTTGCCGTCGAGCCACTTGATG
GCATCCTCGATGGAGTCCTCGATCTTCTTCTTGTCGTCGTCGGGGAGCTTGGACGCGATC
TTCTCGTCGCGCACCGTGTTGCGCATATTGTACGCGTAGTTCTCCAGCGCGTTGCGGGCC
TCCACCTTGTGCCGCACCTGCTCGTCCTCCGACTTGTACTTCTCCGCCTCCTGCACCATG
CGCTCGATTTCCTCCTTGCTCAGCCGCCCCTTGTCGTTGGTGATGGTGATCTTGTTCTTC
TGCCCGGTGGTCTTGTCCTCCGCGGACACGTTCAGGATGCCGTTCGCGTCGATGTCGAAG
GTCACCGTGATCTGGGGCACTCCCCTGGGCGCCGGCGGGATGCCAGACAGCTCGAACTTA
CCGAGCAGGTTGTTGTCCTTGGTCCTCGTCCTCTCGCCCTCGTACACCTGGATCAGCACG
CCGGGCTGGTTGTCTGAGTAAGTGGAGAAGACCTGCTCCTTCTTGGTGGGGATGGTGGTG
TTCCTCGGGATCAGAGTGGTCATCACGCCTCCGGCTGTTTCCAGCCCGAGCGAGAGCGGC
GTCACGTCGAGCAGGAGCAGGTCCTGCACCTTCTGGTTGCCCTCGCCGCTGAGGATGGCG
GCCTGCACGGCGGCTCCGTACGCGACGGCCTCGTCGGGGTTGATGCTCTTGCAGAGCTCC
TTCCCGTTGAAGAAGTCCTGGAGGAGCTGCTGCACCTTGGGGATCCGGGTGGAGCCTCCG
ACGAGCACGATTTCGTGGACTTGGGTCTTGTCCATCTTGGCGTCCCGAAGGCACTTCTCC
ACGGGCTCCATGCACTTGCGGAAGAGGTCCATGTTGAGCTCCTCGAACCTGGCACGGGTG
ATGGTCGCGTAGAAGTCGATCCCCTCATAGAGGGAGTCGATCTCAATGGTGGTCTGGGCG
GTGGAAGAGAGCGTCCTCTTGGCCCTCTCGCACGCCGTCCTCAGCCGCCGGAGCGCCCTT
GGGTTGCCGCTGATGTCCTTCTTGTTCTTCCGCTTGAACTCCTGCACGAAGTGGTTCACC
ATCCGGTTGTCGAAGTCCTCGCCTCCCAGGTGGGTGTCCCCAGCGGTGGACTTGACCTCG
AATATGCCTTCCTCGATGGTGAGGATGGACACGTCGAAGGTGCCGCCGCCGAGGTCGAAG
ATGAGCACGTTCTTCTCCCCGGTGCTTGTGGCCTTCTTGTCGAGGCCGTAGGCAATGGCC
GCGGCGGTGGGTTCGTTGATTATGCGCATGACGTTGAGACCGGCGATCACGCCGGCGTCC
TTGGTGGCCTGGCGCTGGGAGTCGTTGAAGTAGGCCGGGACAGTGACGACGGCGTTGTTG
ATGGTTGTGCTGAGGAAGGCCTCGGCGATCTCCCTCATCTTGGTGAGCACCATGGAGGAT
ATCTCCTCGGCAGAGAAGGTCTTCTCCTCCCCCTTGTAGGTGACCACGATCATCGGCTTG
TCGCCAGCGCCGGGGATCACCTTGAACGGCCACATCTTCATGTCCGACTGCACGGATGCG
TCCGAGAAGCGACGCCCGATGAGCCGCTTGGCATCTGCATGGCACAGCAGGGTGGTAAGT
GACTGCTCAGAAGCGTAAATTCAGAAACAGTTGTTGAGGTGCGCGCCTAAAACAGAGCAG
AAGGCAGAGCACGTATTTGCATCGAAGCACGTAGGTGGGACTTACCAAAAACGGTGTTGG
TGGGGTTCATGGCGACCTGGTTCTTGGCGGCGTCGCCGATGAGCCGCTCGGTGTCGGTGA
ATGCGACGTAGGACGGAGTGGTGCGGTTGCCCTGGTCGTTGGCGACGATCTCCACCCGGT
CATGCTGCCAGACGCCGACGCAGGAGTAGGTGGTGCCGAGGTCGATGCCGATGGCAGGGC
CCTCCCCCTTGTTGCCTCCCTTGCTCGCCATCTCTTCCGATCAAATCGAACGCAAACTGG
CACGCAGCAGATTCGAGACGCTGTCTGTGACTGATCGAGTTGTTCTTGCTGTTCGCTCGA
TGGATGTGGATATGCTCTGGTTTGCTCTCTGAGTTGAGTTGATGGGAGGGGATGAACGGG
GTGGAGTTCTTATATACCGGCTAGAGCGGTGGGAGTTCGGGAATGTTCGCGCGGGAGATG
AGGTGGGCGGTTCAGGCTCGGCGCCGGGTGGAGGGTTCGGGTGCACGCGCGACACGTCCA
GAGCGATGCCTGCTTCTCTCGGTCGGTCCCAGGTTTCGTGCGCCGCTTGGGGTTCGGTTG
GTGAGCCTGCTCTAGTTGGTTCCTGCGACAAGTGGAGATTACCAGAATTATGTAGTGGTT
ACGGCTTGGAGCCAAGTGGCGAGTTTAGAGCACCTTGTGATGTAAAATAGCATCCAAAAA
ACGATTGATGTAAATTATACATCACCAAAACTGGGATTTTTACATCACCAAAATTGTGCA
ACTCCAACTTCTTCAATGGACGCGTCAAATAAAACCCGTGCGGAAAACAGGCTTTTAGCA
CGTGCGGGGAAAGTGACGCGTAAAGAAATATGATGCGCGTGCCGTAGTTTTAACGCGTGT
CGGTGCGCGCGCTATAAATCCAGCGCCCTTCCACGCATCCTCTTCGCCGCTCTGTTTCGT
CACGCGTCCTCTTCCCGCTCTTCCTTCACGCCACCATGCCGCCGCGTCCTCGTGGAAGCT
CGGGCTACCGCAGCGTCCGCACGCGTCCCTCCGACACCTTTTACGTCAAGATCCGGTTCG
ACGAGATGCGCCTCGGCCTCGACACGTTCGACAACGCCGCCGCCGGCGTCCGCACATACA
ATGCGGCGGCATGGCGCCTCCGGCGGCCTCGTAGGGAAATGAACTTCTACGAGGTGATGA
CGCGGGTGCAACGGCTCGCACCCTCCTCGCGACTTGTCACCGAAGAGGACCGTTGCGAGA
ACCGAGGACGAAAGCGCTGCCTCGGCATCGCTGAAATGGACGAGCAAGCCATGGCAGCGT
GGTGCCAACAGTTCCCATAGGACGTCCTCGACGAGCGTGTATTCTTCGCATAAAAGAGGG
TGGAGCGAGCCGCCTATCGCGAGGACGCGCATATGCAGAAGCAGGCCGTGCTCTTCAACA
TCGAGCTCAAAGAAGCGTTGACCTCGGAGCCCAACAATGAACGATGAAATAACGCCTTCA
TTACGACAGAGGAGTCGGAGGAACACACCACCGAGTCGGAGGAAGACGGCGAGTAGTTTT
ATCATTTTTTATCCTTTTTTATCTATAAACTATTGATGAGTAGTGGTTTTTATCTATGAA
CTATGGTTAAAATATAAACAACGTGCTGTAATTTTAGCGTGCTTGCTGAAACGCTACAAC
AACACGCTAAAATTTAGCGTGCCTGATAAATCAACTGCATATTCAAACGTAAAAAGAAGT
TATGGACGCTGTAAAAATATTGCACGCCGCGCGTGCGCGCGTGTATTGGAGATGCTTTCA
TAGGACACGAGTTATCCAACACGTCATGTAAAATAGTACCACCGAGTGGCATCCTCCGCC
TAAAAATGCATATAAGCAAAACATTCATATAAATGACTTAAAACAAACATGATTAAATAA
CAATAATAATTCGACAACCACAAAATTAACATAGTTCACACCAGCAAACAATACAACATG
GTTTGACCAAGAGTATTGCAATAAAATTCGTCCATAACATATTGGAGGATGAAAACATAA
AGATTACCGAAGACGTTCTTCATTGCTGCCCATGCCATTTCCATCACTTCTTCATGAGAT
CTTTTTAAAGATCGTGTTGGGGAACGTTGTATGAGAAACAAAAAAATTCTATGTGCACCC
AAGATCAATCTATGGAGACTAACATCTATGAGAGGGGGGAGTGCATCTACATNCCCTTGT
AGATCGCTAAGCGGAAGCCGTAATAACTT