Contig Data
morexGenes
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Map Locations of contig_135047 (6193 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_135047

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4361 1 1686 bp MLOC_4361.1 Available Available LOC_Os02g20360.1, FRAME:+1, EVALUE:0.0, 13102.m02277 protein tyrosine aminotransferase, putative, expressed





CDS Structure of MLOC_4361






Contig Sequence (6193 bp)

>contig_135047 6193 assembly3_WGSMorex_rbca.fasta
GCTTTGATATTACTCTTAAGTACACGTTCTCTCATGTTATGTCAAAGCACTTTGTAAACA
ATTGTAGATTTGGTATCATGATATGGATTAAACTAGTCAGATACTTGGTAAGCACAAACC
CTACCTATGTTAGGCTCACTAAGGTGGCGTTTGGTTCGAGAGAGAGGAAGGATCAGTTGA
TGATATCCCCAATCATCGAAGTAAATCATGTGTTGTTGCTACCACTTTTCTACAATCCTA
GTAGCTGCATGCGTTGAGCTACTGATCAACACCACTGCACAACCATATTCTCTGTGCAAA
ATCGGCACCCATAGATTACATCTCACAGCTGAAGCAACCACCAAATTTGGAGAGAGGAAC
CCTCACAAAGACCTTTGAGTGCCCCCCACAATGCATGGTTAGGCCGCCGTCGCAGGCCGG
AGTGGTCACCATGCGGACCAACACCAACTCCAACAGGGGAGCACGTCACCGATTACTGAA
ATTCCCCAAACAATTCTTAATTTGTGAACAAAATTTAAAAACAGGAACAATTTTTGAATT
TGTGAACAAATTTTTTAAACGGGAACAGTATTTGATATTGCTGAACATTTTTCAAAATTG
TGATCAAAATTTTAAAATGACTTCTTTCTCAAATTTGAGCAATATTTAAAATTATAAAAA
AGTTCAACCTTTTTGAACTTTTTAAAAATTAGCGAGAACATTTTTAAATTCTAAATATTT
TCGAATTTGGAACATTTTTTCTATTTCTGAACAAAAATTGAAAATACGAACGTAATTTGG
AATAAATTTTGGAAAATGCGATTTTTTGAAATTTCTGAACATATTTTGAAAAACAAAAAA
AACTTTAAAAGGTAAAATAAAAATAGAAACATAAAAATAAGCAAAAAAATAAAAGAAAAG
AAATCCGAGAAAAGCCAACTGGGAATAGCACATGGAAAAACACAGCCGTCCGCCGCACTG
TGTAAAGCTGTAAGTGAGCCGGCCCAAGTCTCGTCGTCTCATCATACCCTGTGCGAAACC
CCGACAATTCGTTGCACTATGCGGCGAATAGGCTTTTCCAGGAGCTCCTGTCTTCCGGTT
ATGGGTCATTTGCACACCCCTCCTCCACTTGGGCCAGACTATTATACTTTTTTTTCCTTC
TTTCGACCTCACGTTACTACGCCAGTTTAGTTTTTGGAAGCGACCAACCGGTTTTGTGAA
GGTTCTAGAAACTCAACCATTTTTGGGAAGCTTCTAGAAGCCTATGAATGTTTCTTTTGG
ACATGTATTATTTGTGTTTTTTCTTTTTCAAATTGCACAATCTTTTTTCAAATTCATGAT
TTTTGTGAAACTTGTGATTTTTTGAATCCGTGATTTTTTTCCTAAATCCGTGTTTTGAAA
AAAACTGTGGACTTTTCCGAAATTAATGAACATTTGTTTGCAAGATCGATGAACCTTTTC
AAATGAGCAATTTTTTTCTAAAATATCCACATATTTTTCATATTCATAAGCTTTACTTTT
AATTGTGAACTATCTTAGAATTCGGTGAAAATTTATTAGTTTTCTTTTTAAAATGTTTTT
TTCAAAAGCCAACGGTTAACGGTTGACCGCTGAACCACAACCACAAACCGGGGAAACCAG
TGACTCGCTGAACAGGGCAGGGCTTTCATATGATTGGGTGGTCTAACACCAGCGCCCCCT
GACTACTAAACGAAGGAATTGCAAATTTTGCCAACCACTACCATGTTTAAAAATGAATAG
CACGATAAAAAGGAAAAAAATATACCTTGGAAAAAAAAACTACTGCCTCTGTTCCTAAAT
ATTTATTGTTGGGAAAAACTAGATTAGTTCTCCCAACAATAAATATTATGGTAAGAAGGG
AGTATAACTACTACACGATCAACCAAAGAATGTCCTCCAAGAAAAACCCAAAGAAAGTGC
TAGAGTTTTGTTTTCAAGGACCGAAAGATAGAGATAGCATTCTGAATTAGGTCCATCTTT
TTCCCAAGGATTGAAAGAAAGAGATAGAATTCTGAATTAGGTGCGGAGATATCATTTCTG
GATTAGGTACAATTGTTTTGCCGGCGCAGCCAAAACCCGCAGTGGAGCCGGAATTGGAAT
TGAGTGGGTGGAGTCGAGAAGCATGGTTCATGCGTTCTCAAAGAGTGTAGCCAGTAGTGT
GTGCTCCTTGGTGCTGGAGCTGCATATACAAGTACATAAAACAAAGACGATCAGCTGGCA
GCGTGCCTGCATGCGTGCTTCTTGCTGCCGCCCCGGAAGCCCCGGTTGATGTGCGCAGGC
GAGTGGCGACGGGACCGACGGCTATAAAGCACGGCCAAGCACCGCCGCCGTTCTCAATCC
ATCCATCCCTTGGCTGATTTGACTGACTAGCTAGTTCATTCCCTGCCACACTGCTAGTAC
TCCTCCTCGTTTCCTCGTGGCAATGGTACACCAGAGCAATGGGCACGGCGAGGCCGCCGC
CAACGGCAAGAGCAACGGGCACGCCGCCGCCGCGAACGGCAAGAGCATCGGGCACGCGGC
GGCGGCGGCGGCGGTGGAGTGGAATTTCGCCCGGGGCAAGGACGGCATCCTGGCGACGAC
GGGGGCGAAGAACAGCATCCGGGCGATACGGTACAAGATCAGCGCGAGCGTGGAGGAGAG
CGGGCCGCGGCCCGTGCTGCCGCTGGCCCACGGTGACCCGTCCGTGTTCCCGGCCTTCCG
CACGGCCGTCGAGGCCGAGGACGCCGTCGCCGCTGCGCTGCGCACCGGCCAGTTCAACTG
CTACGCCGCCGGCGTCGGCCTCCCCGCCGCACGAAGGTAACATTTACAGCTTCACCGTAA
TGTATGCGTGAGCATGCATGCGCCGGTTTACTTACGTGCCCGCCGCTGTTCTTCCCCGGT
GCGTTCAAAATTTTAACCTTCTATAAGTACCTTATAAAAACAAACAGCGCCGTAGCAGAG
CACCTGTCACAGGGCGTGCCCTACAAGCTATCGGCCGACGACGTCTTCCTCACCGCCGGC
GGAACTCAGGCGATCGAAGTCATAATCCCGGTGCTGGCCCAGACTGCCGGCGCCAACATA
CTGCTTCCCCGGCCAGGCTATCCAAATTACGAGGCGCGAGCGGCATTCAACAAGCTGGAG
GTCCGGCACTTCGACCTCATCCCCGACAAGGGGTGGGAGATCGACATCGACTCGCTGGAA
TCCATCGCTGACAAGAACACCACCGCGATGGTCATCATAAACCCAAACAATCCGTGCGGC
AGCGTTTACTCCTACGACCATCTGGCCAAGGTTTTGCATCCATGCATCCTCTGCCTCGTT
GATCGACCGGTCTGTTTGAACATAGTATATGGATTGCGTTTGCTAATCGTGTGCTGATGA
TGCTGTTTGGTTATCAGGTCGCGGAGGTGGCAAGGAAGCTCGGAATATTGGTGATCGCCG
ATGAGGTTTACGGCAAACTGGTTCTGGGCAGCGCCCCGTTTATCCCGATGGGCGTCTTTG
GGCACATTGCCCCGGTCTTGTCCATTGGATCTCTGTCCAAGTCGTGGATAGTGCCTGGAT
GGCGACTTGGATGGGTGGCGGTGTACGACCCCACAAAGATTTTAGAGAAAACTAAGGTAG
CTTTAGCTCCCTATCATTCTTCTCATATGCTACTGTGGGGATTAGTATTTTGCTAAATTT
GTACTGCCTTTGTTTATTCAGATCTCTACGTCTATTACGAATTACCTTAATGTCTCAACG
GACCCAGCAACCTTCGTTCAGGTTAGTCTTTGGTTCTTGCCCTATTTTGCTCATGTCCCT
GTGTTGCATGTCAAATGACCGGCTTGAAGTTAGTATATAGAGTTTTTGTTAAGTGTGAAT
GTCGAAGTCCAACATGATGGAAGAAAGATACATCTATTTTTAGTCATTCCCCTTTGTTTG
TTTGATTCCATAAAATAAATAAACACAAAGCCAGAACCAACTATTGAATAGAACTATTTT
TCTTAGAAAATATACATTGTATTTTGAGCATGCCATATTCTTTTCGATCAAGTATGCAAT
ATATTAAAACTTGCATTGTACTACGAGTATACCATGTTGTTAAGAATTTCTTTACCTACA
ACACCTTGTCTCGCATCTTCATATTTTGATATCCTTGACATTATTGTTCTCTTATGATTC
ACACAACTTAATTATGGATTTTTGTGCTATCAAATTGTTTAGGAAGCTCTTCCTAAAATT
CTTGAGAACACAAAAGCAGATTTCTTTAAGAGGATTATTGGTCTACTAAAGGAATCATCA
GAGATATGTTATAGGGAAATAAAGGAAAACAAATATATTACGTGTCCTCACAAGCCAGAA
GGATCGATGTTTGTAATGGTAAGCTAAGCATAGACTTACTTTTTAAGGTTAATCTGGGAT
CTCATTGCATCCAACAAACAATCAAATCAAAATATAATTATGTTTTGCTATGGATCTTTT
TGAAGATGCATGCATTTGAAGAATAATGAAGAGAGTTGAAATTATTTTAGGACTAATCTT
CCTGATATCATTTGTCCATTTTTTTGTTATTACTGTAAATTGGTAACACTCAAATCATAT
TACAAAAAGTTTCCTCCCATTTTTAGTAAGATTGACTTCCTTTCTATAACCATGTATTAA
CTTCCATGTAAACAGGTCAAACTAAACTTACATCTTTTGGAGGAGATCCATGACGACATA
GATTTTTGCTGCAAGCTCGCAAAGGAAGAATCTGTAATTTTATGTCCAGGTAGGAATGTA
TATGGCCATTTTAAAGGAAAACTATATGGAATGATCGTATCTTCTTGTTATACTAAACAA
TACTCCCTCCATCCTAAAATAAATGTCTTAAACTTAGCACAATTTTGTACTAGATCTACT
ACAAAGTTGAGACAGTTGTTTTGGGACAGAGGGAGTGGTATATATTGTGTGAAAACATAA
GTTTATGTTTGACTGATATATGCTTCTTAAATGTGAAACATGTTCTCTTATGTTTTTTTA
TTGTATACGAAGTTCTTATCAGTTTCCGAGATGACTACACATAAATGATTACCATATCAT
TGTCAGAAAATGTATTACCACATTAGAATATTCTTTATTTTTATGCAAAGACTAGCATGG
CATGTACTTTTCCTTGTACCTATGTGTCTTTTTTTCTCGTTACATGTTTGTGCTTCTCAC
AAAATAATAATACCAAGCACATGTTTCAAATGATTATTAATAATTTTGAGGTGTTTTTCA
ACCAACTTATATACTTTCATAGTTCTAAAAAAAACGTATATATGGTTAACTCTAACAAAA
ACTTATATATGTTTTCTCTCTAATACAGGGAGTGTTCTTGGAATGGAAAATTGGGTCCGT
ATTACTTTTGCCTGCGTTCCATCTTCTCTTCAAGATGGACTCGAAAGGGTCAAATCATTC
TGTCAAAGGAACAAGAAGAAGAATTCTATAAATGGTTGTTAGTTGTACACACCCCTAGTT
GTACATCTGACTGAAGCTGTAAATCATTTCTAGTTATCCCCCATTTATATATTTCAATAA
AACATATTGTAATGGTTCTGTTGTAGCTGTCCAAGTCATGTACTCTACTTTTTGATGTAT
TTGGCCTCATTGCCTTGCATCAATTTCAATAAAAATGGTTGTGTACACCATGATGATGTA
GAGGCGAGGTGTTTCGACCACCTTTTCAACAAAAATCTATATCTTTCAACAAATGAAACC
TTGAGTTCCCTTTGAGTAGAAGTCAACATACTCCTTGAATATGCTATGGTTTCCATGGTC
TGGATGAAACATGATGAATAGAAGTGAAGTTATATCCATGTCAAAGATTTTTAATGTTTA
ATTTCATTATGAGAACTTTGATATTACTTCTAGTACACATTCTCTAAAGTAACGTTGAAG
CACCCCAAAATATTCCTTCTATACACTTGTCAGTTTGGTACTTGAAGGGACCTATATTTT
TCTTATGGGGGGTGAATAGTGTTGGAAATATGCCCTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTAATACATGTGTGAATAAATAGATTCGTATAACTTCGTTTAATGTAAGCTTTAAG
GAGTTATTACGAATTGAAAAGTTCAAGGAATTTCAAGGTCAGGTCCAGAATCAAAGGGAC
CGAAAAATTAGGG