| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_134802
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4183 |
1 |
1658 bp |
MLOC_4183.1 |
Available |
Available |
LOC_Os06g03840.1, FRAME:+3, EVALUE:0.0, 13106.m00328 protein H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed |
CDS Structure of MLOC_4183
Contig Sequence (3991 bp)
>contig_134802 3991 assembly3_WGSMorex_rbca.fasta
ATAGATACGTTGGAGGCGTATCACTACCCATCGACCCTAGATCCATAGTTTGTACCCCCT
ACTCGAGATCAGTCGGTTTTGACACCGACACCCCTACTCGGCTAGCTTTTGTGGTTTGGA
CACGTCGGTTATGCGTTCGTTGCTCTGTGTGGACGATTCGAGGTTGGACTCACACCCTGT
TATGTATGATTTTTTGAATTTAGTCCACATTTGTCATGGGAATAATAAGTTTGGGTTTGA
GTTGTAGTATTACAGGCACCGTCTACCTGTTTTCTTAATTTATGGTTGTTGGCTTATTTT
GTGATATTTTTATATCATTTTTGTGATATCGCATGATGAGTTGATCTCATAAAAACTAAT
GGTTGTAAATTTTTAGTACAGACTAAAAAGACATAAACCGATGGCAAAAATGACCAATTT
TATGGATGTGAACTTGACACATGATCACTTCTTTGGATTGAGGGCTTCAAGAAAATCAAT
TTAAACTTCAAACATTCCATGATTTCTACCCAATCATTACAATATCCATAGAATATGCAT
TCTTGTTGAAGAGTGTCGATTTCAAGTCAAGCCAAATGGTTGTCCTGAATTGGCAGCATG
CACACCTCCCCGACGGCAAACAACTCCCGCGGTAGCGACGGAGGACTAGGAGCTAGGATC
ACATCATGTGAAGGCGATGGCTGCGAGGCTTTCTTCTTCGCCCTCTTCCTTAGAAACGAG
CTTTCGCTGACATGCATAGCGATAATGATGTGTGTGTGTATGGGAGGGAGTGTGTGTGTG
TGTGTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAGAGAGAGAGAG
AGAGGAGCCTTTTGAAGAAAGGAAAATCAAATGCTCCCCGCGAAAATGAGTCCCGTCACG
AGCCCCTGCCGACGTGGTGGTAGTCGAAGCGCCGCCCTGCCGATTCGTCGGTAACCGAAG
CGGCATCCGATTGAATCCGGATTAGTAGACGTAGAAATGCATTCTGGAAAAACAGAAACA
ACTTTGAAAGAAAAGGAATTATCACCTTGGACACCTTTTTACTACTCAACAATCTATTTT
CATTTTTGCGTAATTTATTATTCAATTCTTTTTGGTTGGCATTGTTCATCCGTGGACTAG
AGCGGGGACGGCGTGGATGTCCGTCCATCTATGGTCCGATGGCCAGGTGGCGGCCCGATC
AGAAACGGACGGGCCAGATGGATCCCGGCCATCCTCTCCCCCACCGCATGCACCCCACCC
CCATCCCACCACACCACACCACTTGCAACCCCCCACCCCCAGCGGCCACCGCTTCCCCCC
TCACTCCCCTCCCCGGCGACGGCGACGGCGACGAGCACCGCATCCGTCCTCCTCCCAGGC
CATCCGCTCGCCGGCGATCATCCAGCTTCCCTTAGGTACTGCGCCCCCGATCCACCCACC
CACTCACTCAGCCTTCTTCCCCGCCGCGGATTTCGCCGTCGCCGCGCTCGAATCTGGGCG
GGGCTCCGTCGCTAGAAGCGCGGGGTGTTATTGCTAGAGCGTCCTCGTGGCGCCGTCTTC
GGTCCCCGATGATCGCCTAGGAATCGGTTTTGCTCGGTCTGGGCGGAGGATGGGTTGTTT
TCCGGTTCCGGACCACCGGTTGTACACACCCCGATGAACCCCCCCTCGATTTCTCCCTAG
CTTTAGCGCGCACGGTGCCCGCGGATCTACAACATCCGCGTATTGTTTTCGGCACAAGTA
TGAGGAAACGGGGTGTTGCTTCTCTGGAGCAGACCGGACGCAGGTGTGTGTCAGCCATGG
GCAGCATGTCAGAGTGTTAGCTCTGATCGATTTATGAGTGTTTTCAGGAGCGTTCTTGCG
CTCCAGTGCCGTTAGATAGCACCCATACAGCGATCTGAATAAGGCAAGACTGCTTAGTTA
ACCGGGGGTCTGAATGCCGGCTCTATATCGGATTCAGATTCGGACGTCAGGCAGTATGTT
ATCTATTTCCATTTATTTGCTTTGTGTCGTAATTTCGTAGGACTTATAACCAGCACTTCT
GTTTTGTACCCGCGGTCGAAACAACTGACCGTGTCTTCATTATATGTGTGCAGGCTTGTG
GGGCTCGAATGAAGGTGGAAGATTGTTGCCACTGATCTCCGGTGTATACTTTGTAGCTCA
CATATGGAGACGGTCAATGCAGTTGATGGATACAAGTTTGCTGACGAGTCTACGAGCGAT
GTCCGTGTTTGCTTTAGACGGACCGGTAGCAACGAGCAGCAGCCAGAACGGTTTCCCTGC
CACTCGTCCATCCTCTCCGACAGGAGCAAGTATTTCGCGGACTTGCTTGGTCGACGCGAT
GTTCCTTTTGGTAATAATAACTGCATTGAAGTCGAGTGCCCGAGGGCTGAGTATGACCAT
TATGTCAAGTTGTTGAAGTTTATGTATCTTTCAAGAGAATCGATCGAGGAAGAGTTCACC
TCTGTTAAGTCAGCTCTTGGCGTTCTTCGAGCAGCGACCTCTCTCAAATCCGAGTTCATT
GCTGAAACCTGTATCGGATACCTTGAATCTGCCTCCTGGGACGAAAAAGAGGAGGAGGAG
ATTTTACAATTTGCTCAGACCCTGGGTCCAGAAGCTGCTGCACCTTTGTTAGCCCGTTTG
CAAGCTCCCAGTGCGAACGCTGTGAAGACTGTTTTCATCTCCGCTGTACATTTTGCTACG
TCCATGGAAATTTCATCCGCTCCCGTCTTTGATGACCTCAAGACTGCTGCTCAAGAGCAG
ATTGACTTCATGCTCCATGATGGTGATGATCCTGCAATTGTTATGATGGATGAAGATGTA
AGGTCTGTCTTCAGGGAAGGTTTGACAAAGCTTTTGTCAACGCTTAGGACTGGACTAGAT
CTCTTGGCCTCAGAGTTTGATCAATTGCCTGAACAAGCAGAGCAAAGGATCCTACATAGC
TTAGTTGACATTGACTGGATAACCACTGTCTTGACAAAGATTGAGTTGATGAATGAGTTT
GTTTCTGGCTGGTTAGAAATCTCAGACCATGTCATCTCAGTGGTTCAGGACGACAAGTAT
AGCTCGGGTCTGTGGGCTGTGAAGAGGAAGCTTATAGAAGTGACTGGAAAGGCCTTGGAT
GCTGTTGGCTATGGCTCTGTGGTTCTCCCATCAACATCCAGAACGCATCTTGTGAAGACA
TGGCTCCCGTACATCCGAACGACAAAGCGCTTGCTTGATGGTAAGACAAAAGACGATGCA
TTTCCTCAGATGGATGCGAACTTGTGCCAGAACATTGAGAGTGCAATCGTTTCGATGGTT
TTAGCATTGCCTTCGGGTGACCAGTCGGATATCCTGTCGGACTGGATGCAGAAAGCAGAC
CAGTTCAGATATCCTGACCTCACTGAGGCATTTGAGATGTGGTGTTACCGCAGCAAAACA
GCAATCAGACGGCTGAATGGGGCGATAGATAAGGCCGGCAACCCTATCAGCTTGTAAGGC
TACCATTGATTTAATTGTAGACTGTAAGAGTGATATTAGCCGGTTATACCAACCAAGTTC
TCATTGTTGGATGTTGTTGTTGTTGTGGATGTTGTAAAACAATCACCCATGTTCAATACA
GTTCAGTTCTTCTGCAGTATGCTCTTGTCGAAAACCACCGGGTTTGTCTATTTATTATAC
TCGTGTAGAGATAGTATCTCAGCATCAGCAGTGTTGAAAAGCCTATAATTATTGTTTTAG
TGATACTCATGTTGAAAAAAAAATTCCCTTATTACATTGTAAACCAGGTTAAGAGTTCCT
GGACCGAGTGACTCCCAGTTCCAATCAGGTCTGGCAAACCTTTGTTCCTGAGGATCGCTT
AAGCATGGATCCTGAAGGACTTCGTTCTGTGGCATGCTTTCCAGGTTCCATGGCCAAAAC
ACTCTCTAAAAACAGAGTTTGATGGTTGCTTCTTTCCATGTAATGTTCCCAAAAATGGAA
GAGATTTCGTTCTGTGGCATGCTTTCCAGGT
