morexGenes - Barley RNA-seq Database

Contig contig_134787
Source Contig contig_134787
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_134787 (8700 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_134787

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_4171	2	4043 bp	MLOC_4171.2	Not available	Available	LOC_Os08g14310.1, FRAME:-1, EVALUE:2e-11, 13108.m01527 protein conserved hypothetical protein
MLOC_4172	2	964 bp	MLOC_4172.1	Not available	Available	LOC_Os04g51410.1, FRAME:-1, EVALUE:1e-19, 13104.m05245 protein expressed protein
CDS Structure of MLOC_4171

CDS Structure of MLOC_4172

Contig Sequence (8700 bp)

>contig_134787 8700 assembly3_WGSMorex_rbca.fasta
CCCCCTGGCTCTGTTTAATTAGAGTTTCCTGTGTTCATTGTAGTTTCCTGTCTGTCCTGT
AATGCCGGCTGCCTTTCCATTGCCACCATGCCTCCCTGCACAGAATCATAGCAGCCATGA
GCCCCTCAAGCCTTTCTCATCTCCTTTGTGCCAGCATGATTACACAAGGAATCAAGCAAG
CAAGCCACAAGACTTATAAAATACTAAGGAGCCAGCCTCCCCTTTTTCAATGTGTGTAGT
GTGTACTTGGTGTTGGACAAAGTCGCAGACGCAGAGACATCGGGTCGGGATACCTTTGTC
TTGCCTTTACTTTGCATCCTCATGGCTCTGACCGTCTCGCACTTATCATATTCTCCTCGT
GCCGTATCAACGTCATTCCCACCATAATTCTATTCAATTCTTCGCCATCATTCGCAAGCA
GGCCGTCCACAAGTTCTTGTTTTCCGAGAGAGCTTGATAGATGGATGTCAAATGGCAATT
CTCAGCAGCGTGGCCTACCAAAGATGCGTATAAATCTCTGTAACATCATATGATGCAGCA
ATCAAATCAAGAGAGCAACCCTTTTGTTTTTTGGGTTTTGGTGCACTCTTTGGGTTCTCT
GAATTGGAAGTACCTCTCAGCGTGTTGCCGGTGTGATAATTCGACACGACACAGCACGGC
ACAGCGCAGCTCTGTATCGATATTTTTTAGGTTGTGCCTACGCTTAGCTTCCTCAGACCA
ATCATTATTCAGAGTGCTTGATGATAGGACATGCTTTCATCAGTCGCCCCCTTAACCCAT
TTGGTCTTCCTGCTAGTCGCTTTCTTCGGCCAAGAACGAAAGGGTCAGGACGCACGCAAT
GGGTGTTCAGAAGAGGTTGTTTTTCCTTGCCGTGACAGTGATTATCCCAAACTGCACTGT
TGTTTCTTCAGGCCATCTGTTTGTCTTCAACACAAGGATACGGGTATCCACTGATCTGAG
GTCACACTTTTAGTATATTTTGGAGCCATCTTGCCTGAATTGCATCGTCTTTTCGAATGT
CAACGGGTAAAAACCACTTCTGCCAAACCCATGTTTAGCCATGGCTGAATAGAAAACAGA
TGCTGTTGCCAAACAATACAGGTATAACCTGCAAGACGATGCTCGTAGTATTAGAATGGC
ACCATTAAAAAGGAGACGTCGATGGATAATGCTGTGGTCGCCTCCCTGCAAGGGAACTAA
CGGCCCATAACGTGTCGCTTCCCTTGTTGGGTTCGCTCGGTTTTCTGTTAAGTGTCAACT
TCTGCCATGAAAGAAACCCTCCAAGTTGCGCCTGTCGTGCTCCTCCATTACTCTCCCCCC
ACAAAGTTGCCTTAAACATATTTTTTGTTGCTAATTGGTCTCCTTCATTTCGCATAGCAG
ATAACACAAGAAAGCAAGCAAGGCAAATACCAAAAATTCAGTCGACTTAACAACACTGTT
CACTTGCATATGTTGATATGTATGACAGAGAAACCGAATATATATATTTATATATGGTTG
AAAAGTAAACCCCTCTTGCTCCATCGTCTCACCGAGTTTTGCGAGAATTCAGCGCAATCC
ACATGCAACATGTACAGAAAACATTCAGGCTTTCAGATCAGAGGCTTGCGGCGCGCTCTG
CAACTGAAAAATCCTCGATCTTTTTCCCGGAGAGTCGACGGGCAGGGGGATGGGGGGTGA
CTGATCGATACCTGGCATCAGGCATTGAGTTGCCAGACTGACTAATCAACTATTACCACA
GGGTACTTACTTACTTACTAAATCGGCCCTCCTCCTCATCTTGTTATTATGGACCGGTGC
CACCAAACCGAGCTGCATTCCATGTCAGCGTCGGGGGTCTCTATTGCGCGGCCGCGATCG
AGGACGACGACCGGCTGGGCCACGCCGAGGGCGGCCTCCAGGAGGCCGCCGTCTGTTGCT
TGCGCCTCTTGGGGTCCTCCAGCTCCGACGTCAGCATCTCGAACATCACCTGCACGTCCT
TGTATCCACAGGTCTGCACGTCCTCATGAAGCTTCAGCAGGCTGCCTCCACCGCCTGCAC
GCACGAACCAACACAAGGATAAGGGTTTTGTCATTGTCATGGATTTCGCACCACTTTGTC
AGTGGAGAGGAAAGCAGCAACTATGCTATTGCTTATGCTGGCTTCTTCTACACCTCAGGA
ATTCGTGGGGAGGAGATGAAAGACATGTGACACTCGTCGCCACTCGTGCGAATGGAATGA
CACGTCAGCTTCTTTTTAACCAAGGAAAGAGATTATGTTTGGTTGAAAGAATTATTAAAA
CAAACAACAGCACACCTCAAATTCTTTTGATGTCATCATCTCCTACTGGCTACTCCCCAC
CCCCGGTTTTTTTTTTATGAGAACATTTCCTACTTGGCGTTTTCCTTGCACAAATGGCGA
ACTAGCAAGCTGATTGGGCTCTAGGTTCCTTCCTTTCTTGGGCAGGTCGAACAACTTGGC
AATTTGCGTCATGGGCCTAGCACAAATGGGAAAGCCACCCAGGCCCGTGCACAACTAAAG
CTCTATCTATCCACTATTATTAGACAGACCTTGGGACCAGAAACAATAATGGGCTTCCGC
CACTGGCGATATAATCGAAGCTGCCGAGTCAATGGTGTCTTTTATTCTTCTGGATAAAAA
GGACGGAACAAACAAGACAGCACCATAGCACATCATTGGCAGGCCACAGAAACCCCAGAA
ACTATCCTCACAAGGAAAAAACTCCCAGAAGAGGAAGTAAAAGAGATGAGGCAGCATCTC
ATTCCCATCACACACCCAGTGAAAAAAGGGATAAAAAGTGAAACAAACGGGGTAAAGAGG
GACCTTCAAATTCGATATTCTTCTACTGCAAGATCGATGGCTAGAGACACTCCGTCATGC
GTCCTTATCCAGAAACCGCACGCCCCTTTTTCCTCAGCTAGCCAAGAACATTCCCCACCT
CGGATTCTCACCACGAAGCTTCTTCTTTCGCCCCTTTTCCACCACCTAAAACTTTACCAC
AAAGGCGCACGACACGCATGAATATATGCGCCCTTTATTCCCAGCCCCAAACGAGGGCGA
GCGATCGAGCGCCGCAAGTTCACTGGCACGGCGACGTGTGGCTTTTTCTTTATGGGACGG
CAATGCATGCCATGGCGACTGACGTGACTCCATGTTGCTGCAACGGACGGCTGGGGACAA
AAAGCAAAGGAGATAGCTCCACAAAGACACAAAACAAAAATGTAAAGCTTGTCATCACCT
ATTGGCCGGCTGCCATCGCCCCGATCTCCGAAAAAACTGCTATCATCGCACTATTTCAAC
AGAAAAAAGATGTACTGTAGGATCCATGGGCTGGCGGCTCCGGTGGCCTGCGACGTTCTT
CCCGGGGGCCCCGGTTTGGTTTGTCCATGCGATCATTGCGCCTACTAGTAGCAGTACTAT
GATACGGCGTCCTACGACGATCCTGCCATAGGTCCATGACCATAAGCTCGAGTTCTAGAC
AAGTTGGTGGTTATGGGCCACACTATCTTCCAATGATTGTGTAGTTGAGTCACATTTTTC
CATGGAAAACCTCCGGATGACCGCAAGAGAACCATTGGCAGTGGCAGACCGCTCCCCTTG
CGCACCGCCGCAGCCGCAAAAGCTCAGTTCAGACTACACTGGCTGAATTATTGGAGGGCA
ATGGCAATGCACACTTGCTAAGACAAGGATCTCAAGACCAGACAATGGAAGCTGCGAGAG
AAGAGGACACCACGAGCATACTGCCGCTACTTTTTCTCTCTAAAGATTTGCACGGTGTCA
AGGAAGATCTTGTGCAGGCGTGAGGTAAAGATAGTTATCAGTAGCAATTGACAGTACGAC
GAAAATCGGATGGCGCATAGCAGTAGACGACGAGCAGGCCCACGACACTGGGTATGGACG
GTACTGGCTGGCGGCACAGTGCGGCCAGTGCATGCCAAGTACTGGTGACGAGATCTCACA
CTGTGCGGCGCTGCTAATTCATTCCTTGCAGTTGCAGTTGCAGGTTTGCTGCCAAGTTCC
TTGTATGTGCACTTGTGTACCGACAGCGAGGTTGACTTGCTCGGCAGAGCATTTAGTCTG
GTGCAAGTGCAAGATGGATTTTGAAGAGAAATATACCTAACTGAACCCGTTGAAACTCGG
AAGAAATTTTCGGCATGGGTGGTCGGCAGCAAGAATTGAGAAAGAGGCCACCAGACTTTT
CTTTCGCCTCAGGGCCCCGCACGTGTTAGAATATGTGAGGGGAGGAGCTAGATTTGGGGG
GATGCCAGTGCGAGGTGACGGGGCGCGGAGGTGTGGTTTCTAGACTGAAACTGCAAAGTC
CAATCCGATCTACTTACATCATGGCTGTATTTTAGTGGGGAGGAACCGCATTCCAAAATG
GATTAGTCTTTGACCCGTGTTAAATTGAATTGATGGGTGTGGTCAATGCCGTAAGGATGA
AGAAATTGCCGATCAAAGTAAGTTCAATTCCAATTATAATACTGCAGACTAAACTAAGGG
CCAATTATACTAGCTGTTGATAAAACAGCTTGAGGGTTCACTGGTTTCTTGCGGAGGCTG
TGTATATAAACAAACCAATCATGAAGACTGAACCATCACCTAACCGCTACCCAACTCTGA
TAAGTTTTCTGAAATTCTGGATTGGGAGGGGAGAGATGGAGAAGACAGTAACAAGCATGG
CTAGGCTAGGCTAGGATATCTATCACTGTCCTGCTGAGTATGAAACTCTCTGTTCATCTA
GGCGGTTATTATTGCAGTTTAACCTGAAAAAACCTCAGCCACGCGCGCGTGTCACCTGTC
TGGAATTCTAGTGGATGCTACAGTGCTGTTTTATCTCACGGAGTGGAGTGGTAAACACAA
ACCACGAGCGAATTCCGCGGTGATCGCCACGGGAACTCATCAACTGACTAAACTGAAGCA
GGGGGTGTCGCTCTGCGTGTGGCAACCATAAACCTCAGAATTCGGCGCAACTGACTCAAC
TGATCAGGCGGCCAGGCGCCGGAGCACGCGTCTGACCGGCGTGCCCAGGGCCACGGATCG
ACCAATGGACGACGGCGAAGGCGAAGGCTCGGCCGTGCGTGCGTGGACGGGGAGTAGAGG
GTGCGTTGCGTACCTGTCTTGCGGGAGCGGACGCGGGCGGAGACGGCGGCGAGCGCGCGG
CGCGCGGGGAAGACGACCTTCTTCCGCCACCAGGCCATCATCGCGCGCACGGGCGCCGGT
ATCCTCGCGGCGGCGGCCAGCCTCGACGCCCGCCCTCCGTCGGTCGCTCGCTCTTGCTGG
GTGTTTTGGGATTGATTTTTGATTTTGATCTCGAATCGGATCGAACCGAACCGAACGCGG
CCCTCGATCGATCGCCTGCTGAGTCCTGACTGACGCCGCGCGGTTGGGGCTGATGGGCAC
TGTTGGGCTGCAGTTTATAGGCGAGGGCGAGGCCGAGGGCAGCACTGGTCGCGGTTGTTG
GTTGGTTGCACTCTCTGCGTTTTGGATTCGTGTGCTCTGCCTTTTTATCTCGCTCGCGTG
CCTTTAGCGTGGCTAGCGCTTTGCTGCTATCCGCACCCCAGCCCCGCCCCCCGCAAAAAT
GCTTTTCTTTTCTTGTCCTACTAAAAACTCGGGGTTAACTCAAATCTTACCAAAACCATG
CCATATATTAACTTAATTAAATCAAATACAACCATAGTAAAACCTAAACTAAATCAACAA
TTTGTTGTCTTCTCCTATCTATACTCAAATCAAATCTTATCAAAATGTAGAGTATGGTTG
GCCTAACGAATATGCAACATGATTGGTATTGAACCACTAGAATATGTAAGCCCGGTTTGC
AACGCATAGATAATTAGCTAGTTAGTTTTATGGCAAAAAAAAATACTAATATCTAGTTAA
ATTCATGGTTAAAGTCTGATCCAAAATATGAATTGACTAATAAACCTAGACAAATGAAAT
TCCCTAGACTATTTTTTAATTATTGTAAGTACCCCCTTCGTCTGGAATTACTGGTTGAAG
AAATAAATGTATCTAGATGTATTTTAGTTCTGGATATTTTTTTATTCATTTCTGCAACAA
GTAAATCCAGACGAATGGAGTACACATAGGCCCGCACTCATCTACAAAATATTAGACTCG
CAAAGCTTCAAGTTTAAGAAAGTCACGATAAAGATCATGCTATTGACTACAGTATCATCT
TGATGGAAATTTAAGGCGCTTTAATGTAACGCGAGTGCATTAGACGTGCAGTTTTCCATG
ATGAACTAGACATTCAACCAATGGTTCGGTCTTGAGCCACTCTAAACTACAGAGATTTCA
ACTTCTGATGTGATTAGGTCTGTGCCAATGCATCGTCTCTTAGCATGTAATTATATATGT
AATAAAAACATAAGAAATAACTAGTACAATGCATTGTATCTTATGTGTTCTGTTCAAATT
TAATGTTTATGGCTCATGCATGCAAGTGATTGGGTTAACACCTCTTTTTTGCCTATGGCC
AAGTGCCAAGGTTGTATATTAATTAAGATACAACCTCACTACCTCTCTTCCTTAAATACA
GTGTCACATATGCAAAATGCCTATGAAACCGTGCTAAGAGACTTGCATTCGCACATGCTT
TATACATCAATCGATCTCTTGTGGCCACACCATCCTCCACATGACCTCGTCCATCAAAGT
ATGCTAAGGGTGTGTCCGTGACGTTTTCTTATTAACATAGTCTTGTGATGTTTCTTTAGT
AAAATGCTGGTTTTGTGCAAGATGTATAATTTCTGGCTCCTTGCATATTAGAGATGCGCT
GCTAGGTTATTATTTGCCAAAAGGCGCACACCAATACACAATCATCTCGCGCATTCATCT
ATGGAAAATTCTAGAATGTGACATGTTGAGTTTCATATAAAATACAATTAGGATTGTTTA
TTCGACATGTCCACGAAGTTTGAAGAGGGTGAATGCACACCGAATAAAGTGGATTCAAGT
ACAATGCAAGTTCTGCAAAAATGTATATTTTGTGGCTCATTGCAGACTATTGACGGCTAT
GTACTTGGCTGGTATTGGCAAAAGGCACACGCCAACACACAAGCATCTCCTGCATTCGGT
TATGGAAATTTCTACAAAGTGACATGTTGAGTGCCGTAGAGAACACATTCCAAGATTGTT
TTCTCATATGTGTCCGTAAATTTGAAGATGGTGAAGGCACGCAAAAACAAAGTGAACTTT
AGTAGAATGCAAGTTCGGTAGAAGATGTCGTGACCTATTGAATTTCGTATAAAACACATT
TTCGGGTTTGTTTTTTTGGACGATCCATAAGATTCGAAGAGGGTGGAAGCAAGCAAAAAT
AAAGTGGATTTTAGTAGAATCCAGGTTTTGCACAAGATGTCATGACGTAGTGAATTTCAT
AGACATCATGTTCTGGAGTTTGGTTTCTTCGATGACCCATATGATTTGAAGATGATGAAG
GCAAGCAAAATAAAGTGAATTTTAGTAGAATGCAAGTTCAGTAGAAGATGTCGTGAATTA
TTGAATTTCGTAGACAACATGTTGTGGAGTTTGGTTTCTTCGATAATCCATAAGATTTGA
AATTGATAAAGACATGCAAAATAAACTATTTTTTACTACGATGCAAGTTTTGCAGGAGAT
GTACATTTTATGGCTTGTCACTTACTATTGACAGGCTAGCTACTTGGATGGTATTGCCAA
AAGGCACAGACCAACACACAAGCATATCATACATTTCAGTTATGGAAAATTTTAGAGCAA
AACTTGTTGAATTTCATAAAAAAATATGTTATATTGATTTTTTATGTGTCCATTAAATTT
GAAGTGGGCAAAGGCATGTAAAAATAAAAAACTATTTTAGTAGGATGTAAGTTATGTAGA
AAATTTCGTGAACTATTGAAATCTGTAGAAACGTCTTACGGAGTTTAGTTTGTTCGTTGA
TCCATAAGATTTGCAGATGGTACGATGCAAGTTTTGCATGAGATGTACTCCCGTTGAGAC
ACTTATTTTGAAACGGAGGGAGTATATTTTATGGCTTGTCATAGATTATTGACGGGCTAG
CTACTAGGATGGTATTGCCAAAAGGCACAATAAACCCACGGATGAGCATCTTGTGCGTTC
AGTTATGGAAAATTCTAGAGCAATAATATCGTGTAACCATGCTCATGGTTTTGCACCATA
AAATGTGCAAGGGCCTATTATAAATTCAGGAACAATAAAGAGGTAGTAAATGAGATATCA
TGACACCCTGAGTTCTGAAGAAAATACGTTATTATTATTTTTTGCGGTAAAATGGAGTTT
TATTCCAAAATTACAGGATTATAATCTACTAGCAAGAGATCCTCAATACACGGAGGGCCT
CTCTGAAGCCAAACAACAGTACAAGATCACATTATGTTTCTTTTTTTATGTTCCATAAAA
TGTGACATGGGTGAAGGCACGCAAGATAATGTGCATTTTTCGTGAGTTTATACATTTGTA
AGGGTAACTCCAACGGGCCGACCTAAACGGACGACGATTTTGTCCTTTTTTATCCGTTTT
AGTCGGCTAGGCGGACACGAACGTCCGCTTCTGCAGATGGATCAGCGCATGTGCCCAACG
CTGACCGGACCAATTTTTGTCGGCGTGCGAAAAAAAAATACATAAGTGCATAATTAAACA
TAAAAAGCTGGGCACGAAGGCCGGCGAGAGTTCACCACATTACATTAATTAAACATAAAA