Contig Data
morexGenes
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Map Locations of contig_134747 (4863 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_134747

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4147 1 422 bp MLOC_4147.1 Available Available None
MLOC_4146 2 1480 bp AK371393 Not available Available None





CDS Structure of MLOC_4147






CDS Structure of MLOC_4146






Contig Sequence (4863 bp)

>contig_134747 4863 assembly3_WGSMorex_rbca.fasta
GCTTGTCCAACATCGTCTGAGATGGTTTGGGCATATTCAGCACAGGCCTCTAGAAGCTCC
AGTGCATAGCAGATGGCTAAAGCGTGCTGATAATGTCAGAAGAGGTCGCGGTAGACCGAA
CTTGACATGGGAGGAATTTGTAGAGAGATTTGAAGGACAATAATTGAAAACACACTTATC
TGGTTAACTTTTCTTGTAAACTATGTTACTTAACTGGCTGAGGTATTTCTTTTGTACTGC
TTGTTGAAAAGTTGCATGTTCTCTTACATGAAATGAGGGAACCTACTGATTTGATGGGTC
ATCAAGTGCATGAAGTTTCTGTTTGTGAATCTGGACCATGCTGAAGGGTTCACACTATTA
TGTTCACTTTGTACTGTGTGTTTGGAACATGCGATGAGCCGATGATGCAGGATGAGAGCA
CATCCTTGTGTTTGGTTGGATGTATGATATGAATAATTTCATGATAGGTGGATGTAATGG
AACTCATGATAATGTTTTGTTCTGTTCCAGAAGGTGCTAAATTTTGATATTTGGACCTTC
TATGCTCTTGCAACAGTGAACAAACAAAGGATTTGTATGATCTCTTGGAAGATGGGATCA
TACACCTGCACTATCCCATACAGCTACAAGCTTATTTCTCAGCAAAAATCTCACTGCTCT
TATTTCTTCTTACAGTGGTTCGGAGATGCTGAGAAGTTGACGAAGGCCCTTTTCTCTTTT
GCTAGCCGTCTAGCCCCTGTCATCATATTTGTAGACGAGGTATGTTCACTTCAATAGGAA
AATGGTTACCATTACCTTGGTTATGAGCAATCTCTTGGTATGATGCAATTTCATCTGATA
TGACAGGTTGACAGCTTACTTGGCGCCAGAGGGGGTGCACTTGAGCATGAAGCAACAAGG
AAGATGCGGAATGAATTTATGGCAGCTTGGGATGGTCTAAGGTCCAAAGAGAACCAACGT
ATCCTTATTCTTGGTGCTACGAATCGTCCATTTGATTTAGACGATGCTGTTATACGGCGT
TTACCTAGACGGTAATATACGCGCTTGTGCTCTTTGCTTTCATTCAAGCTATACTGATAT
AGCAAGGTGTTCACCTGTTTCATCATGTACAGGATATATGTTGGCCTTCCAGATGCAGAA
AACCGAAATAAAATTCTCAAGATTTTACTTGCTAAAGAAAACATAGAATCTGATTTTAAA
TTCGATGAACTTGCTAATGCGACAGAAGGTTATTCAGGAAGTGATCTGAAGGTATTAAAC
AAGAGCATTCGTTACCTTCTTCCCTGTAGTTGAATGAAAGTGAAACCGTGCTGTTTTTGT
TCTTGTTTGTGTGCAATCATTCAAATGTTTAATGTGCAGAACCTATGCATAGCTTCAGCA
TACAGGCCAGTTCAGGAACTTCTAGAAGAAGAAAAGAAGGTAGTTTTGCTGACCTTTTAA
CTGTGGTCGCGATGTAAACATGTTCACAATCATCAAAACTTGTGTGCATCTCTTAATTCC
TTGCATGTTTACTGTCTTCTGTAGGGACGTGCAAGTAGCAACAGCACTCACTTAAGACCC
CTTGTATTGGATGATTTTATACAGGCAAAAGCCAAGGTACCGTCGGCTCATCAATTTTCC
TAAAATTAGCAAGTTTTGTGTTTCGCATTACTCTTACATTGGCTATTCCATATGCAGGTA
AGCCCGTCTGTTTCTTATAACGCGACAAGTATGAACGAGTTAAGGAAATGGAACGAACAG
TATGGGGAAGATGGCAGCAGGACAAAATCGCCGTTTGGGTTCGGCAACTGACATGTTCTA
GTAGCAACTTCCCAACAGTGTTGTTTGTAAAATCAATAGGCCGCCTATTTAGCGATAGGA
AGTCAGCCCCCATTTTTCGCCTAGAGCCTATTTATACAGCCTCAGTGACCCTGTACAAAT
AGCAAAATATCAAGTCAAACGACAAAGTTCCAAGTTTTGCCAGTAGCTGGTATTACCGGC
GATTCCGAAAATTTCCGACAATGTAATGCTGAGCTACAAATTTGCTCCAGCTCAGCATGA
GCCTGATCCAGGTGTAAGTAGCACCAGAAAGTTTCAGTTGTTGTAATGGCACTAATTCCT
AGGACTTGAACTCAATGAAGCAATTTTTTCATTACAGTCCTCAAGTGTTCCAGATCACAA
CGATTCCAGAGTATTACCTGTGTCGGTGTGTAATAAAGATGACATTTTGAGTCTCGATCG
TTGGTCTGCGCTCTTTATTTACTCCTATACTTGTGAGTTGCCGTTTTTTCTTCTTATTTG
AAAATTAACAAAACATCAGCAGTTAAGCTGTTGTATAATCTTTTTTGTCGTTGTTGAGGG
AAGCTGTTGTATAATCTTACCCGTCTCAATTGGAGCGTCAGGGGATGGTAACCATGCACG
TCAGGACTAGAGACGCGGTGGTTGGAACATATGGACATGAGGGCGTGGTGGTGACTGGGC
GGTGCTAATCCTAATCCGCATCTGCTCACGAGTGGCTCTGGACCCAAGCAGGACCACACG
CGCACCACGTGGTGCCATGCGGTACAGGATCTGCAGGCGAGAGAGAGAGTGATCCAACAG
CTGGGAATGTGTGAATGCTCTCTCTCCGTGCTGATGCGTGGTCACGCTGGAGGGACCGCG
ATTCTCTTTCTTTTCGTCGCGTCCAGGGCAATCATGAGGCGTCATCGTGCGAGCGAGTCG
GCACGCCGGGGTAGTTGTCGTGCGATCCTCCGCCTGGATGGCGACGGTGCTGTCTGTGTG
CGCTGTAGTTACTGTCTCGAGAAGAAACGCTACTGCAAGGACAAGAGTACGCCCAGCCCA
GACCAGAACGAGTCCGGACCGATCGCATGGGTGGAACACCTTCGCGTGGAGGCCAGTAAC
GTTCACACCGTCCAGCGGCAAGTCAACGTTCAGATCTCACTTTCAAGCAAGTGCGGACAG
GGCAGCCCAACGTACCGTGTAAATCATTCGTCGGGTTTATTTCTGTGAAGAAAGAGTGAA
TTCCATCTTTTATCCTGCAGTTATACATTTGTGACACGCATTACCCGATTTAGTGAAACT
TCTATCGAAATATCAGAATTTTCTGATTTTTACGCTTTTATCCTGATTTTGCATTTTGTT
TATTTACATTAAATAGTATCGGCATGTTGCGTTAATGGTTCGTAAAAAAAGTATGAAAAT
TAGAGGACATCAATGACGATCATGTCCAGACTTTTCTTATTTATCTATTCCATTTCCTCT
CCTCTTCCGAATATTTTTGGACCTCAGATGTCACCTCATATCTTTCCTAATGGACACGCA
TCAGAAACAAGAATCCAAAGCTTTCAAAAGAGCTATTCTAGACAAATTTTTATTCAACGG
AGTAATTAGTGTCACAAATGCATATCTAGAGGTTAAAATGTGAAATTCTTTATAAAAAAA
GGTTGGTGAAACCAAACTATGGTTGATTGGTTAGGAGAATAATGATATTCCCTGTTCATT
AGAGTTCAAGTCATACACTTGATATTTATGCCCGCATTTTTCAATTTATTTTAGGTCTTT
TAACGATGTGCATTTATTAAAAGAAGACATTTCTGTCGAAAGACGTCTGTAACGACTTCG
TCAATCTTTATATGATGTTTCGGCTCAGTCTTTTGAAAATGTTCATAGAAATAGGATATA
TGTATATACGTTTATAAAGATCAATGTATATTCATGTATATGAACGACTTCAATTATATC
ATGTTAAAAAATAGAAACAAAAATGAGCTGCAAAACCCAACTTGCATGGTATATGCAGAC
CGGACCAGACTAGAGCAACCTGGTTGGTGGCCTCGCAGACTTGAGGGACGATGATCCCGG
ATCTGACAGGCTTCCGATGGTTCTCGGAGTCTCGGGGATGGTTCGGTTGGTGGCGATCAC
GTTTTGTGCACTGTGTCTCCACTCTCTACTAATCTCCACAAAATGAAACAACAATGATGG
AATAGGTTTCTATCACTGCATTTTTCCTTATGCGGGTGACTAGCACTGCAATTTCGACCA
ACCGCTTATGTTGACCTCGCTATCCAACGAGTGCCCCACGTGATTCTTCCACAACAATTT
ATTCCGTACCAGCTACCACCATAAAATGCTCTCCCCATCAGGGGCGGTCCTACGATTTTG
GGACCCGGAGCGAAATCAAAATTCAAACCCTTAAAATAAACAATATAATAAGAATTATGA
ATATATGTATACATGAAATATTATCAATAAACATTTAAATGCATTCAAAACAAAATAGAC
TTCTTCTTCAGTACAATCCTCGAACACAACAACGGTTTAGATTGAATGATACTCTTTCAC
AAAAAAGGGTAGGATGGTCTTTTTCCCTGTTCCAACGTAAGCGCGTCAGCCTCGCGGCGT
CAGCGGACGGTCGGGCGACGTACAGGTACCTGGGGTACGCGTCGTACCCGCGCCAGCTCA
CGTGGCGCGTCGTCTCCACGTCACCCCGCATCGCCCTGACCGCGGTCAAACCAGACCCCT
TCGCGCCGATTCCAGATTGACTGTCGGTTCCCGAGGCCGCCGCCATTAATCCCGTCTGTG
TCGTCAGTTCGCCGTCTCCCGAGACCGCCGCCATTAATCCCGCCTGCGTCGTCAGTTTGC
TGTCTCCCGAGGCCCGCCGTATTAACGCCGGACGCCGTCGCCTATTGACCGTCGGTCCGC
CGTCTCCCGAGGCCCGGCACATTAACGCGTGATGCCGCCGCCTATTGATCGTTGGTCCTG
CCATCTCCCGAGGCCGGCGCATTAACGCGTGAAGCTGTCGTTTCCCGAGGCTCGTCGCCT
CCCTGAGGCAATGCATTTACTCCGGGGGAGTAACGCTGCCCAACCGCCCCGTCGCCTCCC
CTT