Contig Data
morexGenes
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Map Locations of contig_134706 (3090 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_134706

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4117 1 3068 bp MLOC_4117.1 Available Available LOC_Os09g36730.1, FRAME:+2, EVALUE:4e-39, 13109.m03625 protein MYB family transcription factor, putative, expressed





CDS Structure of MLOC_4117






Contig Sequence (3090 bp)

>contig_134706 3090 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCCCTAACCTATAACTGTCCAGCTTGCAGAATGGAGGATTCTTCC
ACCACAAGTGTGTGGCTGAGAAGTGGAAGGTAGAGCTACTGCACATAACCAGACACCACT
CCTCAACTAGACAACTAAGAGCCATTTCTCTACCTTCCTCTTGCCGGCCTTCATGCTTTC
TAGAACTAATGCCTACTAAAATTTATTAACAACTAAAGGGGCAAGGCTTATGGGTTTTGT
TTAGGGATTGCACTTTTTTTGCTAGTCATGGGCGGACTATGGTACAAACGGAGATGGTTT
ACTTGGTTAATTTGATGGACCAAAAGAATAGCTATTTGAGTGTATTATTATATCTGTGGG
TAACAAAATGGTGGGACGCCAAACTTGATTTATGGCCAACCAGCTTATTTCTAGTTAGAA
ACCGTAATGACGACTAGTTATTGATAGCTATATATGCAATAAAGAAGTTTGGTGTCTGAT
AAATCTAACTTTCTGGTTTGCATGGTGGGCAGATTGGTCCATGCACCCTTATTCCACCCT
GTTGAGATGCAGGTATTTTCAAGATAATCTTCTTATTACAGATTTAGCATTAGCCTTGTG
CTGAAAAAGTGATACAACCATCCCCTAACATGTTCTGAAATACCCATTAGTTTTTAGTAT
GTGAACACATATTATCTTAAAAAAAAATCTAAGGCAGAAACCAAGTCGGCTTAAATGAAA
AGTGGAGAAATTTGGAGTTAGATCTGGGGTTGTAATCACCCAGTTCTTGCAACAAAGGAA
TTATGTGGACGATATAGGAAGCATGGCCATTTCATGTAGAGGACCATTGTGGAGTGTGAA
GTCCCAATCATTCTGGCCCCAACTGAAGCAAATGGTTAGGGATATTTCCTCCCCTTGCAC
CCAACCAACTATGGTCCATAGTTTGGTAACCATCCCAAAAGAATATATTAGGTAGGCAAA
TATTATGTAAGCCCATCTGGATTTCATCATGGATATGTAAGTCCCTCCTAACATGGAACA
ATTAAATGGTCCACCTCAGCAAGTCATAGCTTCATCTGCCTAAAATCCTCAGAATGTTAT
GTCCACAGCCTTCTTACCGCGGAGTGAATCCTAAGCTGTAGAAAATTCAGCGTATTCATA
TTAATATACGTTCTCCATGAATCCTAAGCTGTAGAAAATTCTGCGTATTCATATTAATCT
ACGTTCTCCATGAGCAAACGGCAAAGCACATGTGATCATAATTGATGATGTCATTATTAA
GCACCACTGATAACGTTATCTTTTGCCATGTGGATTAGCCTATAATCTATTGCCATGTGG
ATTATCCCATATAAATATGATATCCAGGAGATCTGGGTTGCTACAGAAAGAAATAGGAAG
CAGTTGCGGGACTAGTAGGTTTGGTGAATTTCTTAATTTAGGGTTGACCAAGCAGCTCAA
CTAACCAATATTAGAGCTAGAATACAAAACAGAAATGCTTCATATGAAAGTAGCTTCATT
CATCGGACTATGGGCAAATTGGCAGGAGCTATGATTGTGCAAAACAGACTATACTATTAG
GCAAAAACAAAGAAAAAAGACGGTGGGTGGGCAAAAGAAAATCCGTTTGAGCAGCGTCAG
ATACCTGTTCCGCCTCATCCTGTTTTATTATTGAAGAATAAACAAGGAAAAGGGGGTGTA
TGATGAGGGTGCTTCCATTTGTTAACACCTCATCATGTTTGCATTATGCACATTGGCTTG
TTAAATCAGGAAACGGTAAGATGATTGGGGCTCGTGAGATCAGGGCTGGTTTGTTTTATC
GAAAATATACATGAATGATCCGTATACAACTAATTCTGTCATATACTAGTGTATATATAC
AGCAGATCACTGTCATGTTGACATAATTGTTTTGGAGAATCAAAACAACCCCCATAGCCC
GCAGACGACACCGTGTAGGTCCCTGCATCTCAGCCACAGCTCACAAGAGGTCCTTAGAAA
ATGGCTCGGGGAATAATCTCCAACGTGTCACATGTTGTTTATCTAACTGAAGTTGTTGTC
AGACGGATTATCGTCGAGGATTTGTCTTGCAGAAAGAAAGATTGAGGTTGTATCTGATCT
CGCCGATCGTCGCTGCGGATCATTTACTTGTAGATAGAATTGGTTGGAGACCCCTGCCCT
GAGTTTTTGTGTTGCACGAGGAGTTTTAGGCAGGGGCAGCATCAGCACTCAACGGAAAGA
GACTTGTAGGGGGATGGATGGACCTAATAATCCCCCACAAACAAATTAGGAAGAGGGGGG
CATCACGGGGTGGTGGATGCGGTTAGTTAGTTTGCTGTTAAAACCAGAAGGAACGAAGGC
GCCAAGAGGGTAGGCAGGGGAGGCTTACCTCACTTTACACCTACCTGTGAATCGGGCAAG
TAGGCACGGCAGGCACACAAGGGAGCTGAGCTGAGCTGAGCTGAGCTTGTGTGTCCTGTG
GCCTGTGGCTGGCTGGCTGGCTGTGTCGTTGTTGCCTTTCTATCTTCCTCTTTTTGTGCG
CGTAATAAACTGGTAAACAAACAAACCGGCGGTGTGATGAGTTGAGGTGAGGTGAGGTCA
TGGCCTGGGGTAGAGGGGAGGGGAGGGGAGGGGGAGGCCTACCAGTACCAGCCTAACCTT
TTTGCCACCAACTCAGCCTCTAGAAGACCTTCTTCCCCGATCCAGTCAAGTGCACTGCCG
CCTATAAAGATCCAGCCTCCTCCTCACCCACCCCTCCCCGTGCGTCCCAGTAGCACTAGC
ACCCAACAACAACACCAACTTCCACTCCTGCAAACCCCAACCCAACCCAACCCAACCCAC
CACCGAGAAGCACGAGGAAGAAAGCGGACGGTGTCATCGGCGGCGGACCATCTAAAGCGA
TGGGGAGGTCGCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCTGGACCAAGGAGG
AGGACGACCGGCTCACCGCCTACATCAAGGCGCACGGCGAGGGCTGCTGGCGCTCCCTGC
CCAAGGCCGCCGGCCTGCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATCAACTACC
TCCGCCCCGACCTCAAGCGCGGCAACTTCA