| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_134704
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4115 |
1 |
1673 bp |
MLOC_4115.1 |
Available |
Available |
LOC_Os07g43160.1, FRAME:+2, EVALUE:3e-151, 13107.m04534 protein uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed |
CDS Structure of MLOC_4115
Contig Sequence (6123 bp)
>contig_134704 6123 assembly3_WGSMorex_rbca.fasta
TGGTGGGATCGCGGGACGGGCTGCGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAGGGTACGTAGATTCACTCTCCTCTCTTG
TTGATGATCATCATCATGGATAGGTATTNNNNNNNNNNNNNNNNTTTTTTGTTTCCCATG
GTACGTTCCCAACAATGTTGTGTAGATCTTGCGAGTGATGATTACTGTAAAACCTCTCAG
AACACCTTACTTCTCAAGTACCACCCTTTACTAACTTACTATCCTTTTATTTTTAGGTTT
TTTTATGTTTGTAATCTAGATAAATACCCTTTTGTTGTTTCCATAACAACTTATAGAATA
TGCTATTTTCAAACTCTGTTTTGGTTGCGTACAAACATTGCGTAAGTGATATAATTATGG
GGTTAATGGTGCCGTCCTTTTTTTCTTCCTATGGTTTTGACACTCTGCTTACTTTAAAAA
TTCTACAACGCCTTATGCACTTGCATGACATCACGAGGGAGATGAGCCCTTGGCGATCAA
GGGATCCAAAGGGAAGCAAACCACTGGGTCGCAGGGCTGGCATGAATGCTTCCAGTGCTC
CCGGCAGTCAGGAAGGTGGGGTCTGAAGCCCAACCTACCAGATCTGCATAGGAGTTCGAG
GCCGGACGTGCCAATTACAGGAGGAGTAGAGCGAACTCGAGAAGTAAGAGGAGGGCAAGA
GGTTGTGGAAGGAGATGGATGGAGTAGGAGCGTCGTCGGTGTGGAGCGGGCTTCGTCGCT
GGTTCTTTCAGGTAACGGCAGGAGGAAGAGTATAGGATAGGGGTGGCAAGGACGAAACGC
GCAGCCACCCGAGAAAACCGACGCGAGGGCCGAGGGCGTTTCCTCGTTTTCCGTTGTAGT
GATAAAGTGCCCCAACTCGAGAATATACACAATTCATGTGAAACACAATTAACATGGAGC
CCAAAATGATGAGAAACAATTTCCTCTTATTTACGTGAGGTGTTTTCCAAGCATCTTAAT
GTTGCACTTCCACGTCAGATGTGGGCCAGCCCTTACACCCCTATATATAGACCCGGAGTC
CACCGCCCCAACCATCAAACCACTTCCCCCACTCCCCCCGAACCATCGTCATCACCTACA
GCCTCTCTTTCTCTTGGTCCGCTGCTCCCGTCGTAGCCCACGCATCCTGTTGCTTTTCTG
CCGCCGCTTCTTCGGTCTCTCCCCTGTGCTGGTCCGCGCTCTCGTCATGACGAACCACGC
CGCCTTTGCTGCCGAGGACGCGGTCACCGCCGTGGCGGCGCCGGCGCAGCCGGGTCGCCA
TTTCGCGTCGTTCCCGCCGCGGAGGGCGCGCGACTGCAGGAAGGCCGCCCTGGGGCGCAT
GGACCTCTCCACCTCGGGGGTGCTGATGGCAGGGTCTCTGCTGGAGACCATGAAGGCCTC
CTCGCCCCGCCACGCCATGTCCGCCGTCGGCGCCGACCACGAGGAGTGGATCGTAAGTTT
TTTTGACAGGCATCCGTGGCTGCGGCTTATCTCTCTTCCCTCCTCCCCTTTCTCTCTCTC
NNNNNNNCTCTCTCTCTCTCTCTCTCTGAGCCGATGATAGAAGAATCTTTTCCTGGATCG
ATCGCAGGAGAATCACCCGTCAGCATTGGAGTGGTTCGAGGGCGTGCTCGCGGCGGCCGA
GGGGAAGCAGATCGTCATGTTCCTGGACTACGACGGCACCCTGTCGCCGATCGTCAAGGA
CCCTGACAGCGCCGTCATGACCGAAGAGGTCAGTCTCCCTCCTCCCTCGTTCCGTATCAT
CTTCTCCTGCTTTCCCGCGACGCGATGGAAGCAGAGCACGCTTCCGTTCTGTTCTTAACG
AACGTGGGTCTTTGACGCAGATGAGGGACGCGGTGAGGGGCGTCGCCCAGCATTTCCCAA
CCGCCATCGTGAGTGGGAGATGCAGAGACAAGGTACATTCTTGGTTCCTTGCTACTGCTG
CTGCATTTATTTTTTGTTGCTTTCTTGGTGCTGTAGAAGAAGCTTGTTTTTTTCGTTCTC
CCTCTCCCTCTCCTTCCCGGGGGCCTTGCCTTGCACCTCACACGATGGAGCCACCATGGC
TCTATCTAGCAGCGTGCACCGTAAACGGAATCTTCCAGGTTTCCTTTTTGTAATATTTGG
GCGTGATTTTCACCGTCCGCGTGACATGGCATGCATGCCGCATTTGGCCCCGTGGGTGAA
CCTAGACGCTATAGACACACAGGTACATATAGGAAAGGAAGCGTTTCATGAGCGTTTTCT
TGCGGTACTACTTCCGCCCACAGAAAGCCAGGGACCCTTTCGTCCCTTTGCTTGGTTACC
TCTTCTCAGTTACAGTATTTTTGCCTATGTATCTACAAAAGATTAAAATAGCACCGTATT
TCCTGCACTTGTATTCATGGCCATGTTTGTGGTGCTATATGTACGCAGGTGTTCAACTTT
GTGAAGCTGGAGGAGCTGTACTACGCGGGGAGCCATGGCATGGATATTAAGGGCCCAACC
AAAGTGTCCAACCACAAGGCAAAGGTAAGTTAGTCGACATCTCCCTTTCTCCGAATTTTC
TTCTTGACTTGTTCTCATTCTTTTCCTCCTGAAATAGACTTTTCCTTGGCCTTAATTTTT
TTTTGTTCGCGGTAATTAAGTCGCCTGTTAGCTGCGTGATTGAGTGGTTGTTCGGTTTCT
ATACGCAGGCTGACGAGATTCTGTGCCAGCCGGCGACTGAGTTCCTGCCTGTCATCCAGG
AGGTAGGCATGCACGACCTTGTCTTTCACCAGTGCGAGATTAATTATACTTTCCGAGACA
GATCAAAAAAATATTCCTAATCAACTAACCTTGCTATACTTTTTCTCGCTTTGAAGTCCA
CTACTGTTAGTACTACACCTAGACGCAAATACTCCGTAGAATACTAGCTAGAATGTACTC
CCTCCGTCTTAAAATTCTTGTCTTAAATTTATATAAAAATGAATATATCAAAATACTAAA
ACGTGACTAAATACATTAATATATCTAAACAAATTTAAGAAAAGAATTTTAGGACGGAGG
AAGTATACGATTTGCTGAAATGTCTGGCCTGGATGGATCGATTTGCAGGTGTACAAGACG
CTGACGGCCAAGATGAAGTCCATCCACGGTGCCATGGTGGAGAACAATAAGTTCTGCCTC
TCGGTGCATTTTCGCAACGTGGAGGAGGATAAGTGGGACACTCTGGCCAGGGAGGTGAGG
GCGGTGCTGGACGGCTACAAGGAACTCTGCCTCACCAAGGGGAGAAAGGTCCTCGAGATC
CGGCCCTCCATCAAGTGGGATAAGGGAAACGCCCTCGAGTTCTTGCTTGAGTCTCTCGGT
GAGTTTTTCTTACACAGCACATGCCTAATTCTTATAACGGTTGCGGTTTCTTTAATGGAA
ATCGACGGCGCAGCCCGTTGTTTCTTTAGAAAACGTCGCCGCGCACCGCATAGCCTGCAA
AGAAAATGGCACATGATTGTCGTAACCTTGGCAATTTCTTTCTTTTTTAGAGAAACCGCA
TATCATCATTAAACAATATATTTTCCACATAGATACACACATACTCGGAAACGACATGAA
AGGCCAAGAAAATACTATACCCGTGGAAACTTTGCAACCCAATAAAAAGATTTACAAAAA
ATCCGTCGCGGTTTTTTTAAAGGATGTCGAGGGCGCAGCCCGTTGTTTAGAAAGAAAAAC
AGCAGATGTAGTGCATGCATAAATGTTGTTGCTACATCATGCATGTCTTGTTACTTACTT
GCTACTAACACTAAGTTTTGGATGGTTATTTCTTTGCAGGCTATGAGGGGCGTAGCGACG
TTTTCCCGATATACATCGGAGATGACCGCACAGACGAGGATGCATTCAAGGTATAGTCCG
CACTGCACATGTCTATCATTTTGCGTTGATGAGCCCTATCGATCCGATCTAATGAACTGA
GCCCTTTACTTTTGCAAAAATATCAAAATAGGTGCTGCGCAACATTGGACAAGGCATCGG
GATCCTTGTGACCAAGTCTCCAAAGGAGACCAGCGCATCGTACTCTCTGCGTGAGCCTGC
TGAGGTATACAATACTCCACTGTATGTATATGGAATGTATAATAGCTGCGTGCCTATTTT
TGTGCAGTCATTTTATGCTTTCTAAAGTTAGCACGGCTACCTAGCTACTTACCTAAAGCA
ACTAGAGTACTATATATTGCGGTCACTGTTGCAGTAGCAGGGCTAGCTACCAGTTAGGTG
TATGAAATGTTAGGCGTGACGCTTTTTGTCCTTCTTCTAATTAATAAACATGGGTTTTGA
GTTTGACATGAAATTTGTTTTCATATGTGTAACCTGGCTTGGTCATGTTATCCAGGTAAA
GGAATTTCTGCGCAAGCTGGTGAAGAGCAACGGGACGAAGAAGGATTAATTCATTGATCA
ACTGCCTTCTAGCTCTAACTCAACATGGAGAGCGAGCAGGCTATATATATATAGCTAGTG
CATCAAGTTTAGCTTGTTTCCCTTTTGGACCCGGTGTTGTCTTTCAGTTTATTAGAACAA
TGCATGCATGCGTGTTGGGATCGATATATAAGATCGATCCAGATCGAGCAATGACCCCTG
CCCTGCTAGGCCTTGGCTCCGAAGGTTTCTATTACTGCATCCTTCTCGCAAGGTCTTGTA
ATTAGCCTTCCCTTAGCTATGGGAGTGACAAAGTAGCCCTCCCTTTTCTCACCCTGCACT
GTAAAACTGTTGTTCTTCGTTAGCTTGTGATGATGTGATCTCTGTTGACAAGTTAAGATA
TTGTTATGTTATGCTAGATTGCTAGTATCATCAATAGTGTATGTTAGACATGGTTACTGC
TGTGTTAGTGGAAAAAGAAAATATTTACGGCAATGCTACTGTATTAAAGGAGAACCTAAA
AATTATGGCATGCATCCGATTGAGGCTCAAGCGGAGTGCACAGTGCGTTCATATGGGTAT
GCACAGACGGATTCGCCAACAGTTGGTAAATTCATGGACCGTTCGTGCATGCATGTGTGA
GAAGTCAGAACTTCCAGTAGGTAGCTACGGCCGGCCGGCCGGCCTGCTTCCTCGCCCCTG
TACGCCAAGCCTGCGCCTTGAGATAAATGCATGGCATGCTGGCAGCGGAGTAAATTCCAC
AGGCCGATTACCAAGAAGACGAATCGAGTAGTGCATGCGATGCCGTTGCTACTCGCCTCC
TCCTTGCGCCCCTTCCAGGAAGAGAGATCTGGCTGGTCTGTGGGCGGGGAAAGCTGCCGC
TTGCCTCTGCGCGCTGCTGCTACTGGTATGCATGCATGGATCGCTGGATGGACGCGTCAT
CAATGGGGTGGCGCCAAAATGTTGCCATCGAAAAGGGCCTGTCTGCAGTGGGTACTCCTA
CAGTCCTACTACTTGGATCGCACCATTTCTCCACGGGCTCCCATGGGTACAAACGGCAAG
GGATCCCGGCCACATGGTGGGCGAGGCAACTACTGAGCTCTGCTCGATGGAGCTTCGGAA
CCACGCATGCATGCATGACGACGAGGCCGGCCGGCCGGCCTACCGATAGCTTTCCTGGCT
CACTGAATTAATGCGCGCGCGCCATTCGACGATCGGGCACGACGAAGATGGCAGCTGAGA
CAATGCCGATGCCGATGCCGACATGCAGCTAGCTAGGAGTAGCTGCGTGCGCGACCACCC
CTCCCTCGATCTGTGGAGTCTGGAGTCGCCTTTTCCGGGGACGCACATGTCCCCGCTGAC
GGCCAACGGACGGAGGCCTGGGCCGGCCGGCCGGCCTCTCCCTGCGCGCGGCAGCAGCTA
CCGTCTCATTAACTTCGATCGGCCGGTGCAGCGATCCAGCAGTCTCTGCGCCCATGCATG
CTTCCGTCGATCTCGGTCGGTCGCAGCATCGAATCACGTGTCACGACCAAGAATACTCTA
CTCCTCTACTATACATCCTTGGCTCACATATGCATGCATGATGCATCGCCTTCACCTACC
TGGCTGCGATTAGGCTGGTCACAATGGGGAGTAACATAAGGTAGAAACATACACACTTTT
CTAGACTATGTTCCTACCTCCATAATGGGGAGTAACATATATGTAGTGTCATGCAACAAT
GCA
