| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_134629
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4058 |
11 |
3452 bp |
MLOC_4058.3 |
Available |
Available |
LOC_Os08g09190.1, FRAME:+1, EVALUE:0.0, 13108.m00963 protein auxin efflux carrier component, putative, expressed |
| MLOC_4059 |
3 |
1639 bp |
MLOC_4059.1 |
Available |
Available |
LOC_Os01g73970.1, FRAME:-3, EVALUE:0.0, 13101.m08080 protein lysine ketoglutarate reductase trans-splicing related 1, putative, expressed |
CDS Structure of MLOC_4058
CDS Structure of MLOC_4059
Contig Sequence (10316 bp)
>contig_134629 10316 assembly3_WGSMorex_rbca.fasta
ATTCTCTAATGGGCCTAAAGCCCACCTCCAAATTTCAACAATCTCTAAAAAAAACTTATA
TTTAAAAACGGAGGGAGTACATTTGAATAGTGTGATGGCATCGCACATGTTGATGATGAT
GGTGTCACCTTCTCATGAGATCCATTCACGTGCATCATTACACACCAGGACAGAATAATA
ACAATTTTAAAACCAAGTTTTTAGCAGTACTACTACTACCTACTCCATATTAATCACGAG
ATCGCATCGCCATCTGGGATAATGACGCCCCGGGCCCACCACGGCCAAGTTTATCAGAAA
TCCCACGTGGGAAGCCCGAGCTCCAGGCCAAGAGCAAGAACAGCAGCCGCATCCTGCCCG
ATCCCGTCTCCTCCCGGTCCCGTCGCATCATATCACCACAGCCCGAGAGAGATCGATCGA
TCGAGACCGATCCCATCCGGCCGTAGGAACGCGGCGGCGACGGCGAGACAACCATCATTG
GTAAGACGGACGCTTCTTGATTCATTGTCTGTTTCTCTAGGATTGGCTCTTCTTGGATCC
AATCCGCGCCGAGCTCGATTGCATCGCGTATACCCCCCCTGAATCTGAATCTGAATCCCC
ATGTTCATGTTTAATTAATCGATTTCTCGGTGTGCAGGCTGGTCGAATCGAATCTCTTCT
TTGGAGCCGATTGGCCGGGCAGGCGAAAAGGGGATCGGTCGGCGGAGCGATAATCCGGTC
AAAAAGGCTCCGGCTTTTAGTTAGCGGCGGCGGCGGCGGCAGGCGGCTGCTCTGCCAACG
ATGGACCCGCAGGTGGCGGTGCGCGGGGGCGACTGGGTGTCGGCGGTGACGCCGCTGCTG
AAGCTGCTGTGCCTGACGGTGATCGGGCTCCTCCTCGCGCACCCGCGGGCGCAGGTGGTG
CCCAAGGCCACCTTCAAGCTGCTCAGCAAGCTCGTCTTCGCGCTCTTCCTGCCCTGCCTC
ATCTTCGTGCACCTCGGCCAGTCCGTCACGCTCCACAACGTGCTCCACTGGTGGTTCATC
CCCGTCAACGTCCTCATCGCCACCGCCGTCGGCTGCGCGCTCGGCTACGCCGTCGCCCTC
GTCTGCCGCCCGCCGCCCCGCTTCTTCCGCTTCACCGTCATCATGACGGGCTTCGGCAAC
ACGGGCAACCTCCCCATCGCCATCATCGGCTCCGTCTGCCACACCACCGACCACCCCTTC
GGCCCCGGCTGCCACCGCGAGGGCATCGCCTACGTCTCCTTCGCGCAGTGGGTCGCCGTC
CTCCTCGTATACACCCTCGTCTACCACATGATGGAGCCCCCCATGCAGTACTACGAGATC
GTCGGCGAGGGCAACGAGATCGAGCGGGTGCCCGAGGAGGAGGAGACGCAGGTCAGCAAC
TTCAGCCGCCCTCTGCTCCAGGAGGCCGAGTGGCCCGGGATGGCCGAGAAGGTCATGGAG
CACTCCAAGACGCCATTCATCGCCAGGATCTTCGCCAGCATCTCGGGCTCCTCGCAGAAC
ACCTTCCCCGACATTGATTTCTCCGAGGAGGGGGGGATCTCCGGCGCCGGCCCTAGCAGC
CCAAAGTCTCTCCGGTGTTTGGCGGAGCCCAAAGTGGTCAGGAGGATGAGGGTTGTCGCC
GAGAAGACTCCGATTCAGCATGTCCTTCAGCCGCCGACCATCGCCTCGTTGCTCGCCATC
ATCATCGGCATGGTCCCCGTGCTCAAGGCCTTCGTGTTTGGGGCTGATGCGCCGCTCTCG
TTCTTCACCGACAGCCTGGAGATCCTGGCTGCTGCTGTGGTTCCCTCGGTGATGTTGATT
CTCGGAGGCATGCTTGCAGAAGGCCCAAATGACAACGCCCTTGGTAAGCGGACCATCATA
GGTATAATCGTCGCAAGGCTTCTGATCCTCCCGTGCATTGGTATCGGCATCGTGATTCTA
GCAGACAAGTTAAACCTGCTCGTTGAGAACGACTACATGTATCGGTTTGTGCTCTCACTG
CAATACTCCACCCCAAGTGCCATCCTTCTCGGCGCGATCGCGAGCCTGAGGGGTTACAGC
GTTAAGGAAGCATCTGCGCTCCTCTTCTGGCAGCACATCTGCGCGGTGTTCTCTCTTTCC
ATCTACCTCGTCGTATATTTCAAGCTGTTGTCGTACATCTGAAGCCTCGCAAAACCGGTT
TATAGCAGTCATCATGCGAGGTGATTCCCAGGAAAAGGAGTGCTTGAATGAATTCTCAGC
CATGCCTCCTTGTGGTTAAGAAGTGTATCATAATTTGCTAGTGATTGTATTTCTATCACA
TGTATTATTATTCGAGAACAGGAGATACACTTTTTGTCGTTAATTACTGTCGATACATTG
GGTCTGTACATGATTTTGATCTTATTGCAATATTGCACCTTTTGGCTGCCATTGCCAGTT
TGTAGAACAGCACAAGTTGTCAGTACATTGGCTGTCTGATCATGAAGTGCAAATGTCTGG
TGGTCACAGCAGTGTGATAAGTTTGAGTAGCATCTAAATTTCTGTCGATCATCATCTAAA
GCAGATAAATTATTCTTGTGCATGAATGAAACACAAATTAAGCTGAACCTTGAAGTAATG
ACCTTAAATTATATCCATTGTACAAGGTGCATGAATGAAGCAAAAACTGCTGATTGTTAT
TTCCTGGTGAGATCTGGAGGACAGAGCAAAAACAATCAGACATGACAGAATGGTGAAAAG
TGAGCCAATAAAGAACCACAAATAGGGCAAAACTTTAAATTTTTTTCTTGAGGTAAATAA
AGGTGTCCAGCAACTCCATGCAACTTTCTGGTTTCTACTTGCAAGAACAGGAAGAACAAA
AAGGCATGGCACTAACATATGCATCACTGTCATCAACTGAATTGAGTGGCCACTTTTGAT
TTTCTTTCTGCAGGTCTGGGCTGGCCACTTTATCTTGAGATCCAGACATGCCGTTGAATT
GCAATCCACACATAGCTTTCAGGTTGGATTGCTGACTGGAAAGGTGAGTCCCAAGGCCAC
TGTGTGCACCAGCATTGCCAGTATTCTTTCCATGGATGCAGAGAGTGGAGTAAGAAAAAC
AACTCAATTAACTTTTCTTGTTTGCTCGCTAACCTATCGTCGACGATCTTCCAGAATTGG
TGACCAGGTTTTCCAGAAGAGCGAGATCGTGCGATTCGCAAGCTTCGACGAGTGGTCTCT
TGCTATTTCGGTGGAGGAGTTAATTTCCGTGCGAAGCAACGTGTCACGCTTTGGCCATGT
GGGAGACAAGTGTAAGTACAGTTCAAGCAATAACTTGGTTAATAAGCAATGCAAAAGCAA
CTTCAAGGTACCCTTTCAGATGCCAAGGCAGTGATACGCTTACAACTTCTAGGAAGCAGG
GATTTTCCTCGATTTTCCTACTGTTTACTCTGAAAAAAATTCCTTTTGCAACGCGAATGG
TCCTGAAAATCTATGTTGTCTCTTTATGCATCCTCCTTTTGCCTTTTCCTATTTTTCCCT
GCTCCTACTTTTGAGTCACCAGCAACACAGAAAAAAATAATTATGTGGACAGAAAAAGGC
AGGAGTCCCCGGGAGAGAGCCGTATATAAATCGAAATCCACGGCCTAGGAGGAGTTGTGA
TCCAGCCCCAATTCCTCTGTGATCACTTGCTTGGATGTGCTGTGTCAGTTACAGTGACCC
CTCTCCTCCTCTTCCTGCCGAGGAGAAGAGCAAAGAGGAGGAGGAGCAGCGGTGCGGCGC
AGCCATGGAGGTGGATGCAGAGGCCTCCTACAGCTATGGCTTCCTCCCCCAAGGCAGGCA
CCAGCCCTGCTATGCCCCACCCCCTCCTCCACCAGGTATTTATTCTTCCTCTCTGCTCCT
GCTAACTCTTGTTTGGTTTTATTTCACTCTGAGAACACGCAAAACACCCGAACGCCGTTT
CGGTATGAGGCGACGCGTTGCCGTTTGGTTTCTGATCTGATCCTTGTTTCTTCATGGTTT
ATTGGATCCATCCATTCATGCTTTCTCTTGAGAAGAGGCTTGTTCTCGGCGGTTCTTGTC
GCAGGTTCTTGCATTTCCTTTCCTGTTTGTCAGGGGTGCAGCTATACTTTCTGTTGAATC
TTTCGTAACCTTTTTTCGGATTCTGCTTTCTGTTACTTCTGCTTTTATGGTTGCTTGCAA
ATAAAAAAAAATTAGGGGCGTTGCTTTTGATCATGTCTTGATCAGATGTAAAAGGGAAAT
TCTATATTTCTTGCTTCTGGTTTTCTTGGCATACGAGAGAATGATCTGAAGTTGGATGCT
TTATTCATCCTAGCTTATGAAAAAGTTTCCACGTCAGTGATATTGAGAAGTTGATTGCAC
TTTTGAACAAAAATTAAGACAGATGATTAGATTAGATCAGTGATATTGCTCTTGAATCTT
TCCTAACCTGTTTTCAGGTTCTCTTTTCTGTTACTTCTTTTTGCGGTTTCTTGCACGCAC
ACACACACACACACGCANNNNNACACACACACACACACACACACTGGAAGCATTGCTATT
GGTTATGCCTTGAACTCTTGATCAGATGTAACAAGGAAGAAATTATTTCTTACTTCTAGT
TTTCTTGGCATATGAGAGAATGATGTAAAATCAGGTGCTTTAGTCATATTATTCTATCGC
ATAAAAAGGTTTTCGCGTGAGTGATATTGAGAAGTTGACCGCACCTTTTAGCAAAAATCA
AGACAGAAGGATTATATTAGATTATATTAGATCATGTTGGATTGGATTTTCTTAGAGCAG
CACATCATCTGATTTTTTGTTGTTGATGTTACTCAGAAGATGGTGAACTGTGGGAGTACT
TCCCTTGCCCTTTCTGCTACATCGAGGTTGAAATGCCCTTCATCTGCAGCCATCTGCAGG
AGGAACACTGCTTTGACACCAGAAATGCTGTAAGAGAAATATATCCCTCTTTTTTCCCTT
TCCCTTCTCTCCGCAAATGTTTCTTGGAATTACTAGTACTCCCTCCGTCCGGAATTACTT
GTCGTAAAAATGGATAGAAATGGATGTATGTAGAACTAAAATACATCTAGACACATCCAT
TCCTCGGACAAGTATTTCCGGACGGAGTAGGGAGTAGTATGCAAGGCATTGCGTATTAAT
TTTGATCAAAACATAGCCTTAAGGTCCTAATCTGTTCCTGCTGGAAATGCATTTAAAAAT
GCTACTGTGTGTTCGTTTATAAAATTCCAAACTGCTCCATTATTATAGCTCCTGATAACA
CAGAAACAGAGTGTTTTTTGCCTGTCCCTCCCCTAAACAAAGTGGCAAATGGCTTGATTG
ATTCTATGATAACAGTTTGATATCACTGTTTTTCTCTCTACGATGCTGAATCACTAAACT
GTTTTTTACCGCATGATCTTCAGGTTTGCCCGATATGCGCCGAGAATCTAGGGAAGGACA
TGTCCGCGCATTTCAGATTCCAACACTCGCATCTTCTTAAGGTATGTACTATATCTATCT
ATCACTCCTCCCTATCTCAGAATCGCCGCCATTCCAGGAACCAAAAAAAAAAAAAAAAAC
TCATCATCTGATCATGGCAGAGGAGGAAGCCTTCGAGGCCGAGCAGCTCACCATGGCCAG
CAGCAGCAGCACCATCCCCATATGAAGTGAACCCCTACCCCTACATGATGAGCAGCAGGC
CATGCCAGGACCCTGAGCCTGACCCACTGCTCTCCCAGTTCATCTGCCGCGGCAGCACCG
ACAAAACCGAAACCGAGCTGGGATCACGCGACGGAGCAAGCCAGCACCATCGCCCGAGCA
GCGCTCATCTGTTAGCGGATACCCAGAGGTGAGGAAGATGATGGTTGACTGTTTTTTTTT
CAGAGATTTGTTGTGGCCAAGCTCAGTCAATAATGGTGTTGCCTTTTGTTTTCAGGCCTG
TGAGCCGGCTGGAGCTGGAGGAGAGGCTGCAGAGGATTGAGTTCCTTGCTGAGATCATCA
CATCAACCATTCTTTAGTTAAATTATAATCTCTAATTGTGTTGATGTCTAGGGTTTCTTG
ACCAGTTTTAAGCCTGTGTTTTATGATCCAGATGTACTATGTAACCTTGGCTATCTATCT
ATACAAAATTTGCATGCTTTGCACTTATTTTCATGTTGCTAATTTGCTTTTTTCCTTCAA
TTAATGTGCTTCTTTGGTGTAAGTACTGAGAGGATTAACATGCACAACAGTGTTCCATAG
AGATTTTTCTAAACTGATTTTCATTTGTTTGCGACGTAAAATAATTTTAGTTCAAAATAC
AATTCAAGGAAACTACTGAGAGGATTAACATGCACATCAGTGTTCCATAGAGATTTTTCT
AAACTGATTTTCATTTGTTTGCGACGTAAAATAATTTTAGTTCAAAATGCAATTCAAGGA
AACGAATAGTAGAAGAACTGGAGCAAAACGAGTGAATGGGAGAATGCGCACAGCAAAAAG
GGAGGCAACAAAATTAACCTGATATGATATGATATCTTTGTATTGCTCTACACGTATCAT
CAATATCATCACCATTCACCTAAGCTCGCTACAATAAGGGCTCTAGAGATGACAAAAAAG
AGGGGGGAGGGAGGATTAACAGGGGCGATATACGGCGACCTAGTGGACAAATGTTACGTT
GGGAGGGGTGACACCCATCATCTCGTAATACGCCTTGTCGGCCTCCGCGATCCTCGTCTG
GAAGATCCCCCACTCTTTTCGGCAGCGCTCCCGCACCCCTTCCCATGGCGCCTTCCCGTT
CTCCGCCAGTCCCTGCAAGTTTTCGATGGCAGGAATGAGTTTGGCAGTGCGTGCTAGGTT
TTGCTGTTCTATGATGGGGCCTGGTGCTCAAAATACGCTTTTATGATTCTTCTTACCTGG
TTCCCAAGAGAAGGAACCACTTGGTGTACAATCCACTGGGAGTCAACGACACCGATTTTC
TCATGAGCAGGCTGCACAGAGTATAAATACATTAATCAGAGAGATAGAGATAAGATGGTC
AAGAGCTATTTAAATGATTATAGTGTTAGCAATGGAAGTAGTCAGAAATATATCAATGTT
TGACAAGGGCGTGTGGTTCATACCTCCACACATTTCCTCAGAGCAAAATCCAGACCCCAT
CCATGAACCAAGTCATTCTGCAACAACAAGCGGATGTTAACCACATTAGGTGCAAATGTA
AGAGAAAATTAGATGATGAAAATATGTTATACCTGAATCATATGCCATACACATCTCCAT
GCATCTCTGGAGAAAACCGGAGCCATAATTTCAACAAAACTGCACATCAAACATACACAG
TTAGGCCATTTTCCACGTATATCAGCGACCAAGGTAACACAAGTCAGCTGCGGAAGGCAA
AATACATACGCGGCACATGGTGGAAGATGAGGATCCGTGCACCAGCCTGGCCTCTCCTCG
GTATCCCTGTTAAAACCAAACCACCAATCAGGTAGGTATGAGACGAAAGGTAAGGCAAAA
ACAAATTTGTGTATCTCAGAAGGGCAGACAAGAATTCTTCAACTTACTTGTGAACCTCGC
GATCCCCTCTTCTTTTGGTCATCTGCCATGTCAATCCCTTATCTGGCTCCAAACCAGGTT
GCGAGATTTCCAGCTGATATTTCTTGACAAGTTTGATATACCTACAATGTAAACCATGTT
AGCAAGTCACCTGACGCTGCAACAGAACAATGTGTTATGCTAAGTGAAGACTGAAAGCAT
ACTCCTCTCCATTGAAATGATCAACTCCAAGGTCCTCATCCCAGATAAATATATACTCAT
AGGGTGCCACGATATCAGGGTGCAAGAATCTTTTGGCATACCACCTAGAGGCGAAGAAAT
TAATCAACTTTTAGATTCCCTGTTCAGATTACAAATTTAATAAGAAAATACATAAGCATC
AGGGAGTACCATTTCGCTTGTTTCAGAACACTAACATGAATCGCTCGTTTTGACCACTCA
AATTCCTCCCATTCAGTCACATGGCCATCGTAGTGAAATAACAGGATAGCAAAGTCATCA
GAAAACTGCAGGAACCAAGAGCTCAAACAATTAGGCAGATAACCAAGTTACAATATCATG
GTATTTGTACATTAATAGATAAAAGGTAAAGATAACACGACAAAACAATGCCCTGTACCG
AAGTACTGCGAAAGGAAACAGTGGAAGTAATAAAGTGAAAGTAAAAAATGCCCAGAAATA
TACTGCAAAAGGAAACAGTGAAACACGACAAAACAATGCCCAGAAAAGAAACAGTGTAAG
TAAAAAAGATAACCTGGGGACACTCGGATAATTGATATATTATAAATGTCAAAGTTTTAC
CTTCTGGACTGCTCTATTTATGTTGTCCTTCTGTGCAATTCCAACAGTGAAAGTAACAAG
GTACTTTGGCTTGAAGGGTAGGTCCTGCGAATTCAAAGTCAAGCAAATTTTGTGAGGGCT
AACTCAACCACTGAAATTAACTTTGATGCCCTGTAAATGCGATTGTGCAGAAATTAAGAT
TACATTAATTAACTTTGATGAAACATGAAAGCTAAAAATGCAAATTCTGGGCTTAATAAA
ATCAGTAAAGAAATGCAGGGCATAGCACTGGTCAGAACATTATATGGAATTAACAGAAGC
ACACAAAATGTCAGTGCACAACAGCGTGCGTCGATTGTGCAAGAACGATCACTTTGAAAT
TATGAGACAACAATAGACACGCATAACTATGTATCAGATGACAAGAGCAAATATATGCTA
ATTATTTGAGAACAATGTGATAGGCAGAATACATCATGGTCAGCTTTTTGAGGTGGAATA
TTATAGTACATCTAGTGGAGAAAGAAAGGAACACATTATTCTCTTTGAGGCGCAGCATAT
AAGGTGGAAAAGAAAGAAGGAAAGGCATCCCTTGAGCTGAAATATATCCATCCAGGTGGA
TGCAGAAAAGAATAGCAGCTACCTCAGCCGGGTCTCCCCATAGCCTGTGCTTATACAAAT
CAGACTCTGATGAAATGATGCCAGGTGCTAGCATCTCTGCGCCCCTGGGGTTTGTTGGTA
CATATATCTATGATCATCAAGAAAGATCGAGGTTAGTTCAAAATGTTAGGATATGAGTTG
TATATACTTATAATAAAAGATGTAGAAACAGAGTTGGAGTAGAAGAATTCAGCGAGTTAC
CTTCATGGTAGTGTTTGAACTAGATTCAGTAGCATTTCCCCTTGCGTTTCTAGCAGAAAT
CCAGGCATGATTCAGTATAGCCTGAGCCGTGAGTCCAGAGTTCTTGTCTTCTATGTAGGA
AACAATGCTAGAAGGGAAGTGAAGCTGCAAAGCATGTTTGAAAGAGTCAACCTTCTTGAA
ATGCATACATGCAGTTAGTGCAGTACGTTGATAAGAGGTACTAATTTGTATACCTTTGTT
ATGCTGACTGTTGGGAAGGAGATTCCGATGAAGAAACCAAAGACCACCCCGACGATCGTG
ACGACGACAAGCCTCATGCTCTCGTTGGGTTTCCTACTATGCACACTGCAGGGGCAGCAA
GTTAAGGGTCAAGGAACAGGGCAGCATAATTAAAAAGAAAAGATAACCAAGAGGAGAAAG
GAAGGCATGCAAACCTGCGACCAACTATCGGGAGTTTTGCCATCGCCTAGTACACCAGCG
CGGGGACGGGGGATCGAGTCTTGCGAGCGGCAGCTGCTACACATTGCTCGGCAAGAACAT
AATGCTGGCGCCAACCCCGGAACGCGGACCTGAAATACAGTCGATGCTTGCGTCGGAATC
AGTTATGAAACAACACATCCATCCGCGCTAGAATTGAACCCCTGTTTCATAGGCTTCAGT
ATTTATTATTACTAGTCATTACTGGCTGCCAGTTATAGACGCATGCTTCCCTAACTTGGA
TGCAGTAGCTACCGGTCCCTGCCAATTATACACGGTTCCCTTAACTTGGATGCATCGTCC
CTGACTTTGAAACAGCACTTACTGGTCGGGCAGCCAGGATCAGCGTGCGAACACCATGAG
GCGTGCGTGCGTGCGTGCTGGCTGATTCACAAAGCTTGGAGATTTGACATGGCCGTGTGG
GAAAAGAAACTTGCCGGGTTCATCAAAGATGGTGCAGCTCTGAAGTGAACTTGTAGCCTA
GTACAGTACTACTAGTTCTACTACTAGTAGTAATACTGACGCGAATCGATTGGTCCGGTC
CTGGCCGACCGACGAACACAAGGAACAAGGTAGGGGGAGGAAAACCCTACCTTTTTTGGT
TGGACAGCCAATCTATCAATCGGGAAGAGAAGCTGGTCAAGCAGGAAATCCAATAAACCC
CCCATGGGAAGAAGATCGCCGTACCTGTTGGCGGCGGACCGATCCGGCTCCGGCGC
