Contig Data
morexGenes
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Map Locations of contig_134627 (4373 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_134627

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4057 1 2185 bp MLOC_4057.1 Available Available LOC_Os12g13460.1, FRAME:-2, EVALUE:2e-145, 13112.m01432 protein SET domain-containing protein, putative, expressed





CDS Structure of MLOC_4057






Contig Sequence (4373 bp)

>contig_134627 4373 assembly3_WGSMorex_rbca.fasta
TAGACATACTTTCGATCCTACAAGGACCCCGGCAAGCGGCTCGGCGCATGACATCATTGG
CGTGGCACAACCTCCATTCATCCTGATGTCGGATGACGACGCTATTGGATAGGCATCAGA
GGCGGAGCCGCTATTGTTTGTGGCATTTGTCGTAAGTGCCATGAGCCAACACTCGCGCCC
CCGCCATGGCTGCCACCACTCAGATTCGCCTTGCCATGATGCCATCGCCTTGCTGGAGAG
AGAGACTCAATGTTGTCCTAGTTAGCACAGGCGCATGCCTCCCATTCCACATCTAGTGAG
CCCCATTGGTCAGTATTTCTGTCGAAACAAGGTCAAGTAGCAACCAATGCAATCTGTGAC
GCCTAGACACAGAACCGGTACTGATTTGAAAGAAAAAAAAGGTGGTACCAATTTGTTAAC
CTAGCCTCAATTGTGGTAGTTTTATGCAATTAACTCGGATACATAAACCATCAAAATATT
TGGGTTCACTTATGTAGCACTTGAAGTTCCCAAACCTCTCCAACACCAATGCTTCAATGA
TCTAAGCTGGTTATGTGTTGGCCTCCTTTCCTGTCGCCAGAGAGACAGGTGGTCTCTGCT
GTCATGACGCCATGCTGCCATCCACCCAACAGTTGCATTGTTTGATGGGGAGGAGACCCC
ATCCGCCATGATATACATGGTACACAACTTGGAATCACAATAGATACATGAGGCGTTGCT
GATGGTCTCTTGTTCCCCATTTCTTGATCAGACCTGTGGTAATGTCTTATAAGAAATTAT
CTAGTTCTTGGGTGATCTAATCCTGATTTTATTTGTACGAACAAGGTGGTGACGGTGCAG
GCTAGAACAATGCACAAGATGCTCTGAGTTACCAAGGTGTGTCGAGCATTTTCACAAAGC
CATTTGTGCCAGAACTTTCTGTCTTTGTGCATTCAGCATGAACAAGCCCATCATTGAAGT
GTCTTCTGAGAATGGCCACGGTGATGAGAGGAAGAACCATTAGGAGCGTGATACAAAGAA
CAGAGGAGGGAGCAAGAAGCAGACGAGCTGATCTGACGCCAGGTTTTACGTGAGCAACTC
ACACTTATTCTTTGCAGCAGAAAACTAAGCAAAACTCGCACTGCCTTCATGATCTTGTGG
AAGATCCGGTACTTTGGGAGGTATTTAAATGAACCAGATTGTATACATATATCCAACATA
ATTTGTGGTGATATATAACAAACTTTATAAAAGCATACTGAGCATTGTGAATGATACCTT
ATTTCAATTCAGGAGCATATAGTGCAGGGCAAGGTGACACGGTATGATCAGGCAAGCCAC
TTATGAACTCGTTAGCAGCCTCAAGACAGCCATGCAGCATTTTCTTCTCTAACCTTACAA
GTCTAGTAGCAACTTCTTTCTTTGGTTCCAAACTGCCATCGGCCAACTGGCAAACACCAA
AGCAGTTCAGTAATGTAACAGAGAAATGAGGAAAATATACACAAGATCTCACGGCTCGTT
ACCATTGCTTCATCCTCATCCAAATTAGTCGGATAACCAGCCAATCTTGATTTCAGGTAC
ACAACAAGTTGGTCCAGTACAGCTCGCTCTGAGCAAGGACTAACCTATGAATAGCAGTTT
TAGATGACATGTCGCATATTATACAAACTATCATGCCATAATACGGATTATCAGAACGTA
TCTTGGTTGGCAGTTTTTCCTCTATATTGACAAGAAGTCACATAGATCATTGAGAATATA
TATCCCTAGTTTCACTCAGAGTAATGCAGATAAATGATGCTGCCTAGTGTCCCAGCCACC
GTTCATTTCATTTCAGTGGTTAATCTCAACCAGATATAATCCAGTACAAAAGATCTAACT
GTAAGTGAGGTGGAGATCTTTACTTGACTAGGATCTTGAGCATGCCAAGAAAAGGCTTCA
AAAGTAAAACCAATTTCCAGATTACATGTTGTGATGTCTTCAATCTCTCGCTAAAATTTC
AACCAAAGGGAAAATTTGTATTTCGAATTTTCTGCAAAACCAAACCAGTTCTGGCTTGGC
CTAGCACCAGTTTAAAGGCTTATAAGCAATATGCGGGGCATGAACGGGTTGGTTACTTTA
GGGAATAATACTTTATTCAACTTGGAAGATCTAAACCGAACATTCCAAATAGAAGCCTCA
TATAAACCTGAGTAAACAGAAGGCGACTTCAAAGGGTTACATTTGATATATATATATAGG
AAAATGACTATGTACTTTTGGGAGTACGTACTCCCGCTCCTCATGTACCACATAGATGAG
TCTTTTATACCTCATTATTATTTTTAATATACTTCATTAATAATTATTAGATACCTTAAA
GTGAGTTTCATGAAAAACTTCATGTGAGTTTACATATTTTTAAAGGTTTAAGTATATACT
GTTTTGTTTAGACGTCAAAAAGGTATATTATAAAAAGTACGTCGCAACTGATATTTTTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAATGAAGTATATTGAAAATGATAAA
GAGGTATAACCAATGCGTATATGAAGTATATTAAGAATGGGAGTACATACACCCAGGAGT
ACAGAAAGTATAGTAACACTATTCATCACCCAGGGTGTAGAATGAGTTATATATACACAC
ACACACACACATGGAGTAGTATTTGTTTAATCGTTTGGTGCATGGCATTGCATTGTTATC
AATGTCGCTCCTATATTTTTTCCACGGTATTTGACAACATCTAAGTGGTTGTTCACTTTG
CTCGGCCACGGTTAACTAAAGTAAGCCTGTGTGTAAACCACCTGAGGTACAAGTTGAGCT
TGATATAAAATAATAGGAACTACCCCATATAGGTCGAACACCATTCACGGCAATCTAGAT
ATCAAATAGTAATTTATCAAATGCAATATGTTGCAACATCATGGATGGTAAGCTGGCTTA
CTGGACATGTATCACCTTCCGACGAAAGTATACATTGCATTTCATCTGGATCTGAAATGT
ATCCTAGTCTCAAGTATGGCAGCATTTCAGAAATAGTTTCCTTCTCTTTGCCTACACAGA
CCTGAGAAGTGAGGTATATCAATATTCAACATATTCTACTCTCAACTAAATAGGAAAAAG
GAATTGAAAGTCCCACTTGGAATTTTTGGATTGCAAGCTTTCCATTTCTTTGAGCAACCA
TTCTCTTCTCTTGGTATTGAGGATCTTCAGTGTTTAGGGATGCCTGTGATAATTATTTAG
GCTTGGTTACACCAACCAAATAAGGAGGACTGTAAAACAGTTCTAGAAAGTCCACCTCGA
TTGCTATGCGGTCATATGGATTGTCCTCATCAACAAAACCATAATTGAGAAGCAACCTGG
AGTTTGGTTGTGGCCCACACCTGGATAATTATATATGTGAAATCATTGCATAAAAGAACA
GTACATGAGATCTGTCTACAACATAAATTAAAATCAGCATCCTAATTGCCAAATATAATG
AATGGGGACAAGAATATCAATGCACTGAAGCAAACATAATACCAAACGATTATTGGTTCT
CCTGCTTTGTATGGCCGATCAACCAGCAATCGAACAGAACCATCAACAGCTGTCAGCATT
GCTTTGCAGTTGCTCTTGTACGTCAATAGTGGTGGGCCCAAGGGAACTAGTGCAAATCTT
CGTGCTAAACTAACCTTCTGCTCTTGAGATAAGAAGTACAACAAAGTCAATGAAATGCAG
TTTGGTTTTGGAGATATCACAAGCAATGCAATGTTGTTCTCACACAAAATATTAAGCAAA
TAAGACAAATTTTCTGCACTAAATATGGAAAGATAATCTAGAGATAATTGAGAATTGACT
GAGAAAGAACAAGATATGTAGCTTACGAATTTTTCTAGTGTGACGCTCAAACACTTCATC
TACCATTTGTTCCCGGTCATGGTACGTGCGCTTCGCCTGATTCTATCTCCCTATCGCTTT
CATCTCCCTTCGTTAACCCAGCCACCCAGGACCCAACAGGTGCACCGTTCTCTCGCCCAA
CCCCCTCTGTCATATAGATTCCCCACAACCACGATGTCGGCGGCCACCATATTCGAACTC
CGCCAAGGCGCTGCCTCGCACTGATCCCGCATGGCCACGAACGCGACATGGCGTGGCAGA
GTCAGCTCGCACCAGCGCTTCTCCCGAGTCGCGCAGCACCTCAACCATCGGTCGTTTACC
CAGAATCTAGCAACTGTCCGCGGTAGTGTCGTCTCAACCGTACCACCACTGTACCCATTC
CACCATCCACGTCCGTATCGTGATCTGGATACGGTCGCAAGTGAGCAAGGATCGGGTCGT
CGCATCCTTAGTGGCGCGCTACATCGGCACCCGGGTGTAGTGGAAAATGAGCA