| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_134576
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_4011 |
1 |
883 bp |
MLOC_4011.1 |
Available |
Available |
LOC_Os11g39650.1, FRAME:-2, EVALUE:4e-46, 13111.m03917 protein WD domain, G-beta repeat domain containing protein, expressed |
CDS Structure of MLOC_4011
Contig Sequence (3487 bp)
>contig_134576 3487 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGTGTGAATAAACCAAGGTAACGACTGACTGCAAACAGAATTTTG
AGTTGGCACCAAAAAAGGGTAAGATAAGCAACTGCATAACACTATAGTACATTCATTTAC
CTCGCCACCAGTGGCAAGTACAGAACCCTCTCCACTGAATGACAAAGCCAACTGCAAACC
AACATCGTTTAGCTTCACTAAAGCCTCCTGGTCAGATCTCAAAACCAGGCTGCATGGATC
ATCTCCTTCTGTTGATTCCAATCGCACCAACCTATACAAATGGCACATGGTAAGAATTTA
TAATTGCAGTACCATCAGGCGGAGTTAAATTGTGTTTACATCAGTCAGGAAAAAAAAAGG
CAAACGGCAGTTTTATAGAGTAAAATAAGATTGAAGATGTATAAAAGTTGTATGTTTTGC
AGTTAAAATTTAATAAACCACCAGTTCAATTACAGTAACATCTCAAAAAGCCCAGTTATG
CTTGTTGATAAGGCCAATGAGATAGGTCCAACAACTGAAATAAACTTAACATCACAAGAT
GGAACAGATACAGGTGCCCCCGAATTTTAGCTACAATCAGGAAATAAGCTATACTAACAA
ATCCAACATGCTGCTTACACCGACAGTTCAAGCATATTATGGGGTTATCAAGAGGCATCA
TTGTGTTGTTACTAAGAAGTCTTGAACACTATGTTGTGATATGATAGGACAATTATATTT
TGGTCGCATCAATCAGAATTTACAGCATATTCTATAAGCATACATACTATGTGAACGAAC
GAAATACCAGACTTACCTAAGTATTCTATAAACATACATACTATGTGAACCACAGGTTGA
CAACAGTTAACCCGGGCAACACTAAAGATCAAATTGTGAAGATTTTGAGCTAATCAAAAT
TCACAACAGACAAATGCACTAGCGAGCATCAGCGTCACATATCCAAGGACGCAAGTACCT
GCAGCCGTTGGGGAAGGAGCAGAGGACGCCATCGCCGCGAGGGTGTACGGCCATCCTGTA
TGGTACCTCCTCCTCTGTCCCCAGCCTAAACACCTGCACCCCACCATCACCAAAACAATA
GCGTCAAATCAGCGTGTAAATCTCTCCCGATATCCGCATGGATCTAGTGAAATCAGAGGG
CGAGGGGGCACGGGTCGCTCACCGGTTCGGGGGAGAGCGCTGGAGGCGCCCCTGCAGCGG
CGGGGTCGAGGGCGGCGACGACCAGCGCGTTGGGCACGCCGCTCCGGCCCTCGCCTCCGC
CTCCACCAAGGACCACCATGGGGGGCGGAGGTGGGAAGGACGGGGACGCATTCGCATCCG
CGACGTCTACGGCAGATGGGGAGGGCTTGATGATGTGTGCGAGTGGGAGCCAGGAGGCGC
AGTAGATGGGGAAGCCGTAGGTCTGCCCACCGCCGCGCGGCGCCATCACAGGAGAGGGCG
GGAGTAGCGGTAGCCGAAGGTGGGCGGTGGTCGCCGGAGATGCGGTGAGAGAGTGCGTGT
GTGCGGAGGTGGAGGTGACGACGGGTAAACGGTACGGGGAGGGAATTAGATTGCAGCAGG
TACCAACTCCCCCGTAAGTCGCTGTTAGGATCCAACACGCGAATCACTCCATTATAGGTA
AACTGAGCTCAGATACAGGAGATTGGGATTAAGAAAGAGGAAGCACACGAGTTAGGAGAA
GATAGGGGAAGGGAGGAGCCGCCGTTGCTTTGCCTTGATCCAAGCCCGGATCCTTTGCTC
GTTGCCTCCTCCCACGCATTTGTAGTCCGTAGCCCTACATCGTTCGCGGATGGGCCGGCC
CATGTAAAGGTCAAAGGTTGCAAGGCCATGTATACATAGGCTCGTGACATTCTTCTTTTT
TTAAATGCAGCTTGGCCCAAGCCGCTATTATGAAGAGGTTGTGAGGATCCCATGGTGCTT
CAAGATCCTTGATCATGCTGAGGTTATTGTAGATGCCGTGGTAACAGCCATGGTTTAAAT
GAACTTGAACGAGCTCGTAGAAGCGGTCGGGTTGAGGTAGTAGTAGTCGTCACCGATGGA
TACCCGGTTGAAGTAGGCGTTATGGTTGAAGCTGAGGCGGCACTCGTGGACGATGAAGCC
TTGGATGGAGACGACATCGACGGCGATGACACCCCTCCCTTCTTAAAAATTATATTGATT
GTAGCACGTAGAGAACGTCGTACCGCTCATGGCCAATGCACTATAGTTGATTACCATCGT
CATTAGAACCTGACTGCGAATAAGTTGTACCATCGGACATGCCAGAAGCACCAAGATATA
CCCATATTCAGAAGTGTCCTCTGAATACTGTTGCTCGTCACCTAGATCCTAGTACTGACG
AAAAACACTGGACAAACTCTTCTTCCGTTTCAGTGGGCAACAAATTTTCAAATTGAACAA
AGGAATGATGATGATGATTGTAATCCCGAGAGGTGTTGACTGCACAAGAATTCAGATATG
CTCCAAGATTTCCCATCATAAAATATGCACATGGACGTAATGGACACTCAAGGCGCAACA
CCATCAATGTGCTATTAACACTCACGCATAAAGGGTACAGCCTAGGTTTCATTCCATAAG
AAATTGTTTCGGTGCACTGCTTCAAAGCAATGAGAAGCAACAAAATCCCTCCATGTGAAT
GCACTATATAGTTTGGATAAAACTGTATGCCTTTGTAGCTCACAGTCTCCCTAGAAATAG
GTGTTGGCCTCAAACAGGTAAGGTAACCTGCATGTACAGAAAAGGTTCCAATGCAATATC
TTTGTTGTATCAGAATTTGCTTGTTTGGACTCATTAACTTCTGCTGTTACGTGATCCATA
GGGCGCCCAGACTGCAACTTTACACGTGGCAAACAACAAAAAGACTCTTCCATGGAATTT
GACTGGCCATAAGAAACAAGAGGAGAACCCACATTTTTGAATTGCAACCAAACTAGCCCA
ACACTGAACCCTGAAACTTCATGTGGTTGGTGATGTGGACCTGAATATGTTTTCTGATAT
GCACTTTGCACTTTGCAAGCACCACCAGGATTCTCTCATGAGATTGGATCACTAGAACGA
GGAGCACCAGACTCAAATTCCACTTTCGGTAGCTCTGACAATAATTGTATTGCTTGGCAA
TTGCTTGAAGACGATGAACACAGTAGTTTCATACACACACTATGGTGACATATCAAGGGT
TCTGTCAGACGATTCAAAGTGCCAACAAAATGATGCATCACATAAGGGATTTTTGGACAT
GTGTACCTCACTTGCATGCCTTCATGAAAGCAATCAAGCGACTGTCATGAGCATGGTCTG
GGCATACAAGGAATTAGATAAGTTGTTTGTATAGCAAATGACGCACCTTTTTCTTTGTTT
CGGAGCGGGGCGCGTACTATTACCACTACGTACCACACCACCGGGCGGCTGGCCTTCATG
CCGAGTCTTCCTCCGCCGCCAACTCGACGTCGTCGTAACCAATTTCAACCAAACCTCCAT
GCTCACT
