Contig Data
morexGenes
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Map Locations of contig_134567 (3921 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_134567

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4001 1 167 bp MLOC_4001.1 Available Available None
MLOC_4000 1 1044 bp AK250751.1 Available Available None





CDS Structure of MLOC_4001






CDS Structure of MLOC_4000






Contig Sequence (3921 bp)

>contig_134567 3921 assembly3_WGSMorex_rbca.fasta
GTCTCAACTGTGTACTAGCTCTAGTACAAAGTTNNNNNAAGCTTGAGACAGTTATTTTGG
GACGGAGGGAGAATTAATTAAGGTTGATAATAGGGAGTATTTGGGAGAAGAACACTACTA
ATTCATAGCATGCGGATGTTAAAAACGGTACCAGGGATTGGAACGACATCGTCCCCTTGA
TGAAGAACCCAGGCAAGAGCAAGTTGAGCAGGTGTGCAGCCATACTTGGTGGACAACATT
TCAAGTCGTGTATACAGGACTTTATTCTTCTCCAGGTTTTCTCCGGTATACCGAGGATGT
TTGGACTGCAACGGAATAGATGAGAGGGCCACACAAATAACACTACCTTTCTGTATGGAA
GAATATTATACTAGTTCGACTTTTCTTACCAGTAAACTCCCTGATGGTATGCTCTCTACG
GCTGCCCTGCCAGCAAAGAAACCACGAGCAAGTGGGCTGTATGGAACAACTCCGATACCA
AGCTCCCTGAATGCAAATACTTCACATGACAAAGGGATGTTTGAAGACGCCATGAACAAA
GTGTAAAATGGCTTGCTAGCTACCCCGGACATGAAGAGTAAGAAGAACTCTATGTCAATA
ACTTCCAAACCGAAAGAAAATGAGTCCGACGGGGGAGCGGCCACAAGGGTGAGATAACAG
GATTTTGCTCCTGACAGGATATGGAACCCTGGCCAGCAGGGATGCAGCAATACAATCTTA
CCACTGGCCATCACTCAGTTCTCTACAAATCCCAAACAGGCAAAAAAATTACCCTGAACT
GCATTACTTGAAAGAAACTTTCTATCATTTTCACTTCGTACTTATGCAAACCGGAGTTTG
ACGATGGAGCCAGATGGAGTGATTTTCCTGTAATCAACCGTGTAAGACATAACAGCGAAC
TCCTTTGTTTTTTGACAAAAACTTAAAAAGTTGGTAGGAGTAGCTTACTCATATTATAAG
CACTAATCGACTAGGAATCAGCTAAGCGCAGCTGCCCAATTGCGCAGATGCATAGCCCAA
CCATAAAACAATATTATTCACCTCAATTTTTGTTTCAATGATTTGGAATGATGTTGTCAG
TGACCCTATTGTTCAATAATGAATACGATACTAATAACACATCCTGCCGGCCTTTGTTGA
GATCCAATAAACCTAATTAAACCTCCGAGTATAAGCACTGATGGAAAATGTATGAAAGGA
ATATGTACCCTGGGCTTTCTGGAATTAAAGAAAAAAAAAGTCTGTTTGTAAAAAGTATAT
ATAGGACTGGGACTGGATGAACCTGCATAGTGGGGTAATATCTTCCTCTATATCCCTGGT
CCATAGTGACCACTCCATCTGCACTGCGGTGATCGGATGAACTGCATGTGCCCGTCTAAT
GGTATCGGCACTAGCCTCAGACAAGCCAACATACTTGACTTTCCCTTCTTCAACCAGCTT
CTTCAGTTCCCCCATCTACACATGCTCAATGAAGAAGAAGTCAGACACCAGTAACGAAAT
TCAGAGCACGATTACTCGATCGACTGATACTGACAGTTTCTTCTATAGGCACCGACTGGT
CAATGCGATGCAGGAAATATAGGTCAATGTAGTCGACAGCCAGGCGCTCGAGGCTTGCTT
CGCAGCACGCACGCACATACTCTGGAGTGCCCTTCACACACAGGCCACCGGCATCGAACC
CTGCAATGCCACACTTGGTGGCCACCTGAACCCTTTCACGAGGCAATTGCCTTAGTGCCT
GCTCAAGACATTTACACCACATCACTTGTCAAGTTACAGAGAAAAAGGCAGCAATTTAAC
TCCTCAGTACATTCTGACTTTATGCAATGTGTCTAGTGGTGGAGCTTAGTGCAGACAACT
GATGATCAAGACACAATGCTTTGCTAAACACAAAACAACAGTACAATGAGATTTACATTA
TGCCCTCTCTTGTGTGTTCAGTCAGTAACCCTCTTGATACCAGTTCCCTCTGTGATCCGT
GTGAAACTCCGCCACTAATGTGTCATTGTAGCTTACAAAGGATCATCTCAGATACTGATA
ACAGGAGCATCGCTAACTCATAAATAAGCTGCCAAGGATTCACTATACTTTCTGAGCTTC
TATCTGTGGCAGCCGAGTAAATAGCATTAAACTACTACTTTGCAGGCTAGGGTTTCAAAA
AACTAAAAACATGTAGTTTTTTAGGACCCTATCCTGTAAAGTAGTAGTTTTATGCTATTT
ACTCGTGGCAGCCGGATGCTAAAAGGTAGTACGTCCTCTGTTCCAAATTAGCCTACCAAA
ACATCTTATAGTTTGGGACGGAGGAGAAGGTGATGCTTGGATAAACATTTCTAGCATTCC
ATCTAATTCGACCTGTATGCCCAAAGCACAAACACATCATATTCGACTTTGGAGAGGAGG
AGGATTTTGACCTTTCCAAGTAGGACCTCGTTGGTGTGTGGCCCATAAGCATCGGCGGTG
TCGAAGAAGGTGACGCCGGCGTCGAAGGCGCGCCGTATGATGGCGACGCCAGCATCCTCC
GGCACCGGATCGTTGTACACGCCGGTGAGACCCATGCATCCGAACCCGATCCTGGACACC
TGTCCCGCAAATGGCACATCCCCAAGTCATCAGTCAGTTCTGCAGTTTGGTATTTCCCCG
CGGATTTGCGAGCAGATTCGAGGGGGTCGAATGTGGGATTTTCGGTTAGTTTGTTACCTC
GAGGCCCTGCGTGCCAAGCTTCACTCTGGCCATCTGGCTCTGCTCCATGGATCCAACTGG
TAGCAACAAGGCAGAGGAGGAAGAAGACTGAGGGGAGAGGACCTCGCCGGCTACACTAGC
TACTTTATATTTCTTTTAAGGGAAACTTGCTACTTTATTATTGCTTGTGGGTGGATGCCG
CCCAAACCCAAGAGATCGTCTTCCACGTCAAAAAGGAAAAAAGAAAGATCTTTTCAGCCA
AAAGTGCATGGATGATTCTATGGGTATATAAATCCATTTTGGAAAGCTCATTTTTAAGTA
CCAACAAATTCTGGAAAATGTCTCACGCATATATCTTCCCACTCTATGTGCTCACGGAAA
GTTTCGCGAGAAAACAACTTTTTTTTGGCTGTGTAAAAAAGACAAAAAAAATTGTCATGA
AACACTATTTAGAAGCATTAAAAATCGTCTTTTTACGGAGGCGAATCCAAAAGGATTATT
TTTCACAAATCTTTGTACCGCGCACACATGTTTGCGAAGATGTATGCATAAAATTCTCTT
TTAAATTTTTGACATTTTAAAACATGTCTAAAGTGCATTTTTTTTAAAGTGGCTCACTAT
GCACATGTATTCAGGACATCCACACTCGTTTATTCCCCTCAATTATAAGTTTGGGAGAAA
TCACCCCCTAACATCTTGATTTTTTGCGTAAAAGGACTAATGTCTATTATAAAAGTTCAC
CAAAAATAGAATATTCCCAACATAATAAAAATTACATCGATGTCCATGGACCAGTGAATG
GCCACAACCGCCGCTAGAACAAGCCGTCAATGCGATGTTGTCACTCGCTTAGTGTTGGAG
CCGTCCTAGCCTTTGATGGAGTCCTTGACTAAGGGGTCCAAGCTCAGGTGGTTTAGTCCA
TGGGTCATACTCGGGCCCATCAAGGAGAAGGACTTCGAAGGCATTGTGACAAAGCATGAG
CACTCTGATTCTATCAAAGGCTTGGCGTGCACCCCAGGGAAAGGATGATTCGTTCGACAT
GTAACCCATAGATGGTAACTGACATTCATGTAACCCTAAATACCCCGGATGCCTTTATAA
ATCATGGAGTTTAACCCGCAGAAGACACACATACGCAACATCATAACTCCTAGGGTTTAG
CCCACAATCTCATGACCTTGAGGTGGATCAATGATACGTCTCCAACGTATCTATAAATTT
TGATGGTTCCGTGCTATTATC