Contig Data
morexGenes
Links



Map Locations of contig_134558 (3376 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_134558

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3997 1 186 bp AK364111 Available Available None





CDS Structure of MLOC_3997






Contig Sequence (3376 bp)

>contig_134558 3376 assembly3_WGSMorex_rbca.fasta
AATTTTGGAACAATTACGTTGTTGCCAAAAAGGCGGAGGCTATACGCATTGAACAGTTTA
GACCGATATGTCTGCTCAATGTCAGCTTCAATTTTTTTTACAAAAGTTGCCACTAATAGA
TTGACAAAGATAGCTCATTCAGTAGTGCAACCGACACAAACTGCATTCATGCATGGGAGA
CACATCTTAGAGGGTGTGGTTGTCCTACATGAAACGTTGCACGAAATTCATATAAAGAAA
CTAGATGAGTTATCTTTAAAGTGAATTTCGAGAAGGCATATGATAAAGTCAGATGGACTT
TTCTTCAACAGACCTTACGTATGAAAGGATTTAATGAAGGATGGAGAGACCAGGTTGATT
CTTTCATTAAGAAAGGTAGTGTAGGTGTTAAAGTTAATGATGGCCTCATTCCACATCTGG
TAGAGGGGGAAGTGTCCATACTACAATATGCGGATGATACAATTATCTTCATGGAACACA
ATATGGCCAAAGCAAGGAATATGAAATTATTATTGTGTTTATTTGAACAACTTTCCGGGC
TGAAAATTAATTTCAACAAAAGCGAAATTCTTTGCTTCGGGAAGGCAAAAGATGAGCAAG
ATGTTTATAGACAGCTATTTGGATGTGAAATGGGATGACTATCGTTTAGCTATCTTGGGA
TTCCTATTCAGCATAGATGGCTGACGAATAAGGAATGGAAATGTATTAAAGATAGATTTG
AAAAGAAACTAAGTTGCTGGAAGGGGAAGCTTATGTCATACGGAGGGAGGCTAATATTAA
TAAATTATGTGTTAACAAGCCTACCCATGTTTCTCTTGTCTTTTTTTGAAATACCAGTAG
GGATACGAAAAATACTAGATTTTTATAGATCTCGTTTCTTCTGGCAAAGTGATGAGGCTA
AGAAGAAATACAGACTCGCATGTTGGGATATTATATGTAGACCGAAAGACCAGGGGGGCT
GGGAATTGAAAACTTAGAAGTGAAGAACAGATGCCTGCTTAGCAAATGGCTTTTCAGGAT
ATCCACAAAGAACGAAGGAATGTGGTTGCAAATTCTGAAAAATAAATACCTACATTCAAA
AACTTTAGCCCAGGTTACAACTAGACCAAATGACTCACCTTTCTGGAAAGAGTTAATGAA
GATAAAGGTGACCTTTTTCCAGCGGGTGAAGTTTGTAGTGGGGGATGGTGGCTCAACAAG
ATTGTGGGAGGATACTTGACTTGGAGACACACCTTTAGCACTACAATACCCCATGCTCTA
TAATATTGCACAACGTAAGGAGGACTATGTGGCCTCCGTACTACAACCGATACCTCTTAA
CAGGCAGTTCAGGTGAGCTCTAGTGGGAGCACGCTGGAATTCATGGCTGCATCTGGTAAG
AATACTTATGCAGGTTCAGTTAACGAACCACACAGAAAGTGTTCGTTGGATATTGGTTGC
TAATGGGGTACTCTCAGTAAAATCCATGTATGCGGATCTCATAAACACTGGACCGTTATC
CAGATCATTGCATATTTGGAATATCAAAGTGCCCCTCAGGATTAAAATTTTCATGTGGTT
CATACACAAAGGTGTGGTATTAACCAAAGATAACTTAATAAAACGAAGATGGAGAGGCAG
GTCGGATTGTTGCTATTGTGAGCAGAATGAAACAATAATACACCTATTTCTTGATTGCTC
ACTTGCAAAACTTTTATGGCGCAGCATTCAGATCACTTTAAACGTTACCCCACCTACATG
TATTAATTCTCTATTTACAACTTGGCTCAATGGAGTGGAGGTTGAAATAGCGAAACTTAT
CAGGATTGGGATTTGCGCGTTATTTTGGGCTATATGGAATACCAGGAACGACATGACTTT
TAATGGCAAGAAGGAGGTCTTGTATTCTAAGAGATAGTTCGTTTCCTAAGGAGGTCTTGT
ATTCTAAGAGAAGAATATTCTCTTGAAGGAGGTCTTGAACCCACATGTGGTAATCCTCTT
GGGAAGGTAGATTAAACAAATCTCTATCAAGGTTAGTCTTTAATACTTTCATGGCCCTGG
ATCAAATGAACGTGGATTGACACTGATCTTATTCGACCAATGAGATGTCGTTCTTGAAGC
CTTCAGAGTATATTTTTCATAGGCACCTCCATTTGTATGCGAAATTCACTTCTAAAAGAT
CCTGCCCGGTGTTCCTTTCTTTCATGCACCGCCTTATGACCAAACAGACTATACAATTTC
TTTTCATAGGAACTACTAGTAAAAGTGCCCGTGCGTTGCACCGGGTTAGATTGTCAATAT
TTGAATCATGAATTTTGTGTTTGTAAAGTCCCGCGCTCACCCTCCGTCGGCATCTACTTC
AGCCCCGCACCGTCATCGCAGTGCTAGTAGAGATGCAAACATATGCACTTTCATTCAAAT
GCGCGCACTTATCACAAGACAGGCAAAGGTATTTACATGGTGAGAAGAATGCAGTGGGCG
GCTTGGTCCCGGGGTGTACCAAAGCCCCTAGAGTCAAATGTAATGCTTGATGTCAGTTAT
GTGGCTTGTGGTGTGAAGCATGCTGCACTTATCACAAGAACTCGGCCTTGTCCACCGCCT
TCCCGTCGTCGGCGTTCGCCATCTTGAACGCCTCATTCACCACAACATCCACCTGTACAT
TTTTATTGAAGATAGTACATCATTAGAATTTTAGCCAACACGGCTCTGAAAATTCATTCC
ATTCGACACTTATCAGCTTCGGAATGATGATTTAGCACATGGAAATGATATCTTCTAAAT
TACCTGATTAACAGCTCCATATGGTGGTAGATTTACTGACGCGTCCATCTTGTCAAACGC
GACGCGAAGGTACTTCTTTGATGTTCTATCTTTGTGTTCCTTCGGGACATCTCCCCAGAC
AGAATCCAGCAGCTGGGAGAAAAATGCATCGATGTGTATCGATCAATATTGTTTAACTGA
ATACAATTTCCACAGATAAAATCAAACTTGCAGACACATGCATCTTAGTATCAGTATACC
TTGTCGAAATCGAACTTGTTCGACCGTATCTTCCTGATGCCAGCCCCATCACAGGTGTTC
TCCGTGTGCGCCACAATTATCGGGCACTCCTGGAGTCGCCGGGTGATCGTTCCCAAATAC
TTCTTGAACTCTTCGAAGAAGACCTCTTGCGATGCTGACTGGTCAAGCTGGTCCGCTGGC
AGTTCCTGCAATGCATGTACTATGATCTTCTCCATAACCTATCACAAACACTCAATTGTC
AGCAAACGCTCCACGAGCCTTATCACAGACATGAACTATTATGGTTGCAACTCTTGTTGT
GAAACTGCACAAAGTGAATACCAGAGAGTCCGAAGGCATCCCGACACTCGTGGTAACCAC
CATTGCCCCGGCCACC