| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_134491
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_3959 |
1 |
2618 bp |
MLOC_3959.1 |
Available |
Available |
LOC_Os05g47850.1, FRAME:+1, EVALUE:0.0, 13105.m05071 protein chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed |
CDS Structure of MLOC_3959
Contig Sequence (4676 bp)
>contig_134491 4676 assembly3_WGSMorex_rbca.fasta
CCCCCGCCCCCCCCGCCCCCAGCCGCGGCGGCGCGCCATGGATGCAGAAGTGGGCCCCGG
CCGACCCCTCCGCGCCCGCGCCCGCCCCCTCCCCCGGCCACGCGCCGTCCACCTCCATCG
ACCGCATCGTCCACCGCCTCCGCAACCTCGGCCTCGGCACCGACGACGACGAGCCCTCCT
CCGCCGCGGTATCCGCCCCGCTCGACGGCAGGGAGCGCCTCGGCGACCTGCTCGACCGCA
GCTGGGCGCGCCCCGACCGCCAGTTCGCCGCGTCCGGCCTCGACGAGGCCGTCCTCCCGT
GGGAGAGGGACCGGGAGAGCGACGGCGAGGAGGTGGACGGGGTCAAGAGGAAGCGGGTCA
GGGCGCCCTCGCTCGCGGAGCTCACCATGGACGACGTCGAGCTGCGCCGCCTTCGGGGCA
TGGGCATGACTCTCAAGGACCGCATCACCGTGCCCAAGGCCGGGGTCACGCAGGCCATCA
CCGAAAAGATCCACGACGCCTGGAGGAAGTCCGAGCTGGTCCGTCTCAAGTTCCACGAGG
ACCTCGCCAACGACATGAAGACTGCCCATGAGCTTGTCGAGGTACTCTGCCCCTGCATTA
TCAAATAAACTATAATGCAGCACCAGGAATCTTCAGTCTCATTATTGGTTGTGGCGATTG
GACTTTCAATCTTCCGTTTGTTCCAGTGAATTTGATGTTCAGTCTTTATTGATCAGCGAC
GAACAGGAGGATTGATCATATGGAGGGCTGGGAGTGTCATGGTTGTCTACCGCGGGAGCA
ATTACACTAGGCCTCTGAAATCTCAAACTTTGGACGGTACCTCGTCACCAAGGAAGCAGG
AAGATAGTGCATTGTTCATCCCCAATGGCTCGAGCACCGTTGAGAATGATAATCAGGGGA
AGGATCTAGCTGCTCAACATGATAATGCACCCATACTGGATCTGCACAATACAGAGGACA
TGACGGAAGAGGAGCTGGAGTTCAATCAAATGCTTGATGAGCTGGGCCCTCGCTTTGTGG
ATTGGTGGGGAACGGGAATTTTACCTGTGGATGCCGATTTGCTGCCTCAGACAATTCCAG
GTTATAAGGCGCCATTTCGAGTTCTTCCAACTGGAATGCGTACAAGCCTTACCAACTCGG
AGCTGACTAATTTGCGGAAGTTAGCAAGGAACCTCCCTTGTCATTTTGCTCTAGGTATTG
CTTTTCGATAGTGCGAATATCATTTCCTCATCGTGGCTTTTAATGTTGGCATCAAGCACC
TGCTTATAGCTTCCTAACTTTCATTGAAGGGAGAAACCGGAATCATCAAGGCTTGGCCGC
GGCTATTGTTAAGCTTTGGGAGAAGAGTTTGGTGGTGAAAATAGCTGTCAAACGTGGAAT
CCAGAACACAAATAATAAGCTAATGTCAGACGAAATAAAGGTTTGGATACCATCTTATTG
TTATTCCCTCTCATTCATAGGCATGACTACTTCGTAAAAGTTATATCGATGGACCTTGGA
AACACTTGTTCTTATCAGACTGTATTTTGTCCTTAGTATCTAAGCTGAGTCCCAACTGAA
TATCATCTAAAGACTTTTAAGGCATGAATAAGTGCAACTAATGTACTGTCCAAGACATGT
TTCAGTGAGTTCAGTCTCTTATGAAATTTATATTTTTACTACCAAAGCAATTAGCAATGT
CAAGAGTTCCTAAAAATCACCACCAGAATTCAGCACAAGTAAACATTTAGAAAGGATTAA
CCCATGCCCAGCACTTACTGAATCGTAAAATATTAGCAGTAAAATTGTGTTACACACAAT
AGAACTTGCTTCCTGGATCCTGTACCAATGAAGCACTCTTTACTAACGAAGTGTTCTCAT
AGAGCATCATGCTTCAATAAGAGCATCTTTGAGAACTTGCACGCTTTAGCATTATATTCC
CATGTTACTGTTTATATTGAGTTCAAAAGCATGTTTCCGAAGATCATTTTCGTACTTCTA
TAATTTTGTAGCTTCTACAAACTCTCATGCATTTGCTAATGTTTCCCGATTTTGTACATC
CAGAACCTAACAGGGGGTACCCTGCTCCTTCGAAATAAATATTACATTGTCATATATCGT
GGAAAGGACTTCCTCCCAACATCTGTTGCTGCCGCCTTGGCTGAAAGAGAGGAGTTGACA
AAAGATATCCAGAATCTAGAGGAGCAGAGAAGATCCATTTCCATTGAACACTCTCCGGAG
GATGGTTTTGAAGGGCATGCTCTCGTAGGAACCCTTGCTGAATTTCAGGAGGCGCAGGCC
CGTTGGGGAAGAAATGTAACTTCTAAGGAGCAACAAGAGATGAAAGAAGCATCTTTTAGA
TCAGAAAAGGAAAAACTTTTCAGAAGACTCGAACACAAGCTTTCCATTGTAAGCAATTTA
TATATTTTGTTCTTTGATAACTGTAGCTTCAGAGGGAAAAATGGGCTTCCAAGTAAATCG
GAATATTTTATTTTCAGTGTACATTTCATTGTATTGAAATGTTTATTTTGTACTGCTCTT
GTAATTATGAAGTTGAGTTTGCTTATCTTTTAGGTATGCTAGTGTGACATAATCTTGTTA
CCTTACTTATTCGTTCTTCCTTTTATTTCTTCTTTAAATATACAGGCTCAAGCAAAAATA
CATAGAGCAGGGAAGTTATTATCGAAGATTGAAGCTTCTATGGTCCTCGCGAACCCATCC
GATGACCGAGAAATGATCACAGCCGAGGAAAGATCTGTTTTCCGTAGAATTGGTCTGAAA
ATGAAAGCATATTTGCCTGTTGGTAAGTTTCGTGGACAATCACCTTGGAACATGCTTAAC
CATTTCTATTGAGTAATTGGTTTATTCTCTTTATTTGTACTAGGAATCCGTGGTGTCTTC
GATGGCGTCATTGAAAATATGCACTTGCACTGGAAGCACAGGGAAGTTGTCAAATTGATT
ACAAAGCAAAAGACCTTGGCGTTTGTTGAGGAGACAGCACGACTTCTAGAGTACGAGAGT
GGTGGTATACTAGTTGCGATCGAAAGAGTTCCCAAGGGTCACGCACTTATTTTTTACCGT
GGAAAGAATTATAGGAGGCCTATTAACATAAGGCCTAGAAATCTCTTAACAAAGGCTAAG
GCGTTGAAACGTGCAGTTGCAATGCAACGCCATGAGGTAAGTTCACCTATATTAGGTTGC
CATAAAAGAATGAACTTCCTTATCTTTCAACTCATGACTTGTCATGCACTCATGCAGGCC
CTCAGCCAGCATATAGACCAATTGGAAATCAATATGAAGCAGATGAAGCGTGATTTGGTA
TGTAATTTTTCTATACAACAAAATTACTCTATGTCCATTAAGAGGGTATGTTCACGTTAG
GCCATACTCCCCCTGCCCATAACTGGCTTACCGTCTCATCAAAATTTAGTAATTTGTTGT
TTGAGTTGTAGAAAAGACACATCATTGTTATATAAAGGAAGATTTGCACACTGGCTTCCA
AGCCATGTTCATATTCACTTGTGCACTGCATAAGGTTTTGGAGCAACATAAATTGCATAA
AACTAGAGTCAGTGAGGCAGATGACTATACTTACACTAGTACTCCCTCCGTCTCAAAATA
AGTGTCTCAACTTTGTACTAAGCTTGAGACAGTTATTNNGGGACGGAGGGAGTATTATGT
ATCCTATCTGTCTTCCTAGTACATCTTGTTCATCGATTGATGATGCCCTGATGTGATGTG
AAACAAAACAGGGCATGGAGGACTACGATGAAGAGGGCGGGGATGGATCAGATTCAGAAA
GTGAAGACGATACAGCAGGCTATGATGAGGTAATCATTACATATCCTATCGTATCATGTC
TTCCTAGTACATCTTGTTCATTGGTCAATGGTGTCCTGATGTTCACGTGGAACAAATTAG
GGTATGGAGGACTACGATAAAGAGGAAGAGGATGAATCAGACTCGGAAGATGAAGACAAC
TAGGTGGAATCGCACGCTTTGCCACGGCAGTGATTTTTTTTTAGATGTTCAGACAGTCTG
TTTTGTCTGTTCACAGTATGGACTAGATGGTCCCCAACAATAGAGCAATATAGAGTTTAT
GGTGCGTGGTTTCATCTTCACATAGCAGCCTCAGCAGTACACAAGAGGATCAACTTCAAC
CACTGGTCGTGCGGTCATGTCCTTCTCTTGGTCGCTATGTCGAGAGGCCTGGTCTGAAGC
CTGTGTATGTTTGGTGTGAAGCAACATCCAGAGCGAAAGTGCTCACATCAATAGGCTGCT
GCAAGTCTGATAGATGGATCGCTTCCCAGTTGGGACTCTCATGATTAGCCTTTGTAGGAT
CTGTACAAACACTTGGTATAGCTCGTTCTTGAAGAACCATTTCTGTGTGGACATAGGGTT
CCTTTATCGTACTTATTACTATGTACTCCCTTATTATGTACTCCCTCTGTACCTCAATAT
TTGTTGTTGGGGAGAACCAACAACAAATATTATGGAACAGAGGGAATCTCCCCTAATAAT
AAAGTGCGCAGCGCTTTTGTCGTCCGTCGTGGCATTTTTACAAAAACACTACTCGCTTTT
CCGGTATTCAACCCGCAGTATGTTTCTAAGTTAAAAACGTTTCGGATTTACATAACACCC
TCCCCCCCCTCCCTGGCTTATCCATTCCCGTCGGAGGGGCCTTCTCGCCGGCGACG
