Contig Data
morexGenes
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Map Locations of contig_134471 (3204 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_134471

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3948 2 1465 bp MLOC_3948.1 Available Available LOC_Os01g72190.1, FRAME:+3, EVALUE:5e-64, 13101.m07863 protein expressed protein





CDS Structure of MLOC_3948






Contig Sequence (3204 bp)

>contig_134471 3204 assembly3_WGSMorex_rbca.fasta
GGCCCGCCGCGCGCGGGGCGGCGCGCGCCCCGGGAACGTGCGCCCGGCCGGCCGCTCAGG
GTCGAGGACCGGCCGGGAGTTTGCTGCCGCGACGCCCTCCGCTCCCGCCGCGCAGCCGGT
GGTGCCCAAGGAGGCGGCGCTCGGCGGGGGTACGCCGCTGGCGGCCAGGCCGACGTGCTC
CTCCGCGCAGAAGAGCGCCCGCGCCCGCGACCTCTGCGGTGGAGGCGGCGAGGGCCGCCG
CGCCTGCCGGTACGCCTACTGCTCCTACAAGGGCCACGCGCCCGCGCCGCCGCCGCTGGG
GGCGTTCCTGGCTTCGCGCAGGGGCCTCGTCAAGACGGAGCAGAGCATGAAGCACAGGGG
CGTCTCCGCGTTCCGCAGCACCAACACCAATCCCAATCCCAATCCCAGTTCATTCAATGC
CGCCGGCAAAGGGGACGGGTTCTTCCTCCAGGTGGCGTGTCCCGGCGCCGGCGCCCGCCC
CAAGACGGCCAGCTCGGGCTCCTGCTGCAGCGGCCTCTCCGCCGAGGAGGTGGACTCCCC
CTACGTCAACTTCGGTCCCCGGGGTCTCCGGGGCGGGACGGACACGTGGGGCGCCTCCGT
CGACGGCTCCTGCGGCTCCAGCGACGTCATCTCGGATGGCTTCGCCGACCTGCCAGCGAC
CGCCACCTCTCCCTCTCCCTCTACCGGGCGCAAGGAGGGGAATCGCCAAGATGATCAAGA
AGCAGCAGAGGAGAAGGAGGAGGAGGACTCTGCTGCCTGCTGCAGGTCTGATATCTCGGA
GGAGCTGGGTCCAAGATACCAAGCCAACAACAATATGTCCAAAGGTGAAATTTCTCTTTC
TGAACTTGTTCGTTTCTTTCCAGTTTCCACCACATTGAATGAATTCCAGAAACAACTGCT
GATCGGCGGCGAACAATGTCGCAATCCTGCAGATTGTGGCGGCTCTTCAGTGGATTCCTC
AATGGACGACATATCCAGTGCATTTGCTGGGATGAATTTCCAAGATGTGGGTGCTGATCC
TACTGCTGATGGGGCGGCAACCAGCCAGGGGAACAGGTTGACCATGTCCAGGAGAAGAAC
ACCTAGAGGCGGGGAGCGAATCCGGGCATTCAACCCCAGGGCCCCAAACTTTCTTCCAGT
GGTGCCTGATCCGGATGCTGAAAAGGTTGATCTCAGGCATCAGATGGCCGATGATCGCAA
GAATGCCGAGGAGTGGATGGTTGACTATGCGCTTAGGAGGACAGTGAACAAGCTGGCCCG
TGCTCAGAAGAGGAAGGTGGAGATGCTTGTCCAGGCCTTTGAAACTGTTCTACCGCCACC
GCCAGTCCCAGGTGAGAAAAACTACCTGCAAGACGACCACAAGAAAAGCTTGGCAAGGTG
CAACTGATAGATTTTAGAGGTAAGAAGAACTAGTTGTAAAATCACTCCAAGAAGGAGTAG
TGCAATTCATTCATGTCGCACAAATGTTTCCTGTGCTGTAACTCATGATGTGGTGTCGAT
TCTTTTACTTGCAGTATTGGGTTCAAGCTGGAGCAGATGATGATAATTGGGGTTCTAACT
TGGTGGTCACTGCAATATTTGTGCCAGAGACCTGCTCAGCAAGGATAGAGAGTTTCTTAC
TAGCACCTGAGATCTTGTGCTCATAGCGCGGCTGTACTCGAGAGCCGCTAGGGGTCTCGC
TCACTGGGTCAGCTTGTTAGTGTAGTGGCGTAGTGCATGTGTACATACGTCTGATGTGCT
CATGCTGATATTTTAGTACTGAGAAAATGAGACTTGCAAACTGGCAAGGGTATTCAGATG
TATTCCTTGCTTGGACAAAGATCAATAAAACTCTTATTGACAGCATGTGTAGCGAGAGCA
TGTCTTGGCAAGCTTGTGTGATCCTTTCGTGTTTGTTTGCATGTCTTGGCAATCTTGTGT
GATCATTTTGTGTTTGTTCGCATTCTCTGTGATAATAATCAGCAAAAGGGAGGTTCCATA
TCTTTGTCCATCTTACAGATGTAAATGTTTCCATATGCTGCCTATTTGCAATGTGTTAAG
TAGTAATTCAAGAAACACAATAAGCAATTAAAGCACCTAAGAGGTGATTGCTGAGACTCT
CAGACCTTTTGTTATCAATGCAACTAACTGTTGGTTGCTGGTCTAATTTGGTGCCTAACT
GAGACAGTAGAACATATGGTACAAACCTGCTGAGTTGTACAATTCAGAACAGGCGTAATC
GAATGCCATATCAGGTCACAAGAGACAGCAGAAGAAATTTCAAATATTCGACGATCCGCT
CCAGAGTTTTCTGGTGCGCACCAAAAAATCATGCCCTGGTAGTGGCAAGCAAATAAACAA
GATTTAGCACGCCTGGTACTTCATTCATCTCAGGTTCAACCAAAAAAGAGTCCCAGATAA
ATGGCACTGAATAGAAACAACAAGAAACGGTCCAAACAGATATGAGACATGACAATAAAT
GGCACTGGATAGAAACAACAAGAAACGCTCCAAACGGATACGAGAAGACGGCAGATGGAT
CCAGCATGAATCACCATGAATAGATGGCATTAACACTGAAACCAACAGTCACAATCCACA
ACGGGAATAAGGTTTGATGCTCTCACCAACCTGAAGGATGGATGCTCATGCTCAGCTTGA
TACGCGCCAATCACACCAACCGGCTGTAACTGAAACAGAAGCAGCCAATTTACTGAGATG
CTGTGCAGCCCAACAACTATCATGGACCATCAAAAGGTATATCAGCATGCTGCAGTTAAC
ATCACATTAACAGCAGTAGGGCATATCAATTTTGAGGAGTGTATCAGGCCCTTCAGTTGG
GCATATTTGAGTGCATTTGCTGAAGCCAGCCGATGCAAACTGAGCTTTTCCTGTCTGCCA
AAACACCGAAAAGAAATAAAAAAGAAATATATGGGTAAATGCTCCTTGATATGAAAACAA
AAGGAGATGAGATGTTTCATCAAGTATGTAATACTGCATTTTAATTCTTAACTATGCATG
ATTATCACATTGTCAGTATGATGAAGTATTAGAATGTTTCCAAAATTATAACTAGCAAAA
GTAGAATGTCTAGTGACATCTGCACCGAGTGTAGCAATTATCACAATGGATCAAATCAAC
ATAGATAGTAATACTGCCAATACAAGCAAGTGCCGAGAGGCTCAAGTAAAGTAACACCAG
GAAGAAAGATACTATTATTGCCAT