Contig Data
morexGenes
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Map Locations of contig_134343 (4149 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_134343

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3906 5 2312 bp AK375511 Available Available None





CDS Structure of MLOC_3906






Contig Sequence (4149 bp)

>contig_134343 4149 assembly3_WGSMorex_rbca.fasta
TTTCGTATAGCATACTTTAACCGAAGTTATACGAACGTACGGCCGTTTCCCTCCACAGAG
GTTACCATGTACCGAGTGTATCCAGTCGGTTAGCTTGGTATCCTCCGAATGCTAGTCTCC
AACTGAATGATTGAGGACCTGTTATCGACTGGATGATGGGACTCCTTAATTCAGTCAGGA
CTGACTAAGGGCCCTGTCCTTTGTGAGGGGTAGTCCTTGGATAGGACCTGCATGGCAGGC
TTATGACCCTACCCTAGGACAATGACCCCATCACGGTCCGAATTGTGATATTCTTTTGCA
ATTAACTCCCTAAGTTTAAATGGTAGTATGATTGTGTGACGTCATTGAGACATAGAGGGC
AAGTGTGGGATCCGATTGAAGATGCTCTAGGAATTTAAGGACCGTCTGCACCCGATGTGC
GGGTCCTGGATCTCTTTTGGACGGCGCCAGGCAAGCTTGAAGGCTGGTCCGAGGGACCGC
GAACGCCGTGCGACGTGGCGGAGTTGAATGCCTCAACTCATCAATTCCCTTGTCCGGCGG
TCGGTGCTTGGCAGCATGCATACACAGTCACTAAACTCATCTCGTGCGCTCGATTGCAAG
GTCCAAGCAGGCCTGGGGTGGGATGTCTCCGGCAGCGGAGCCGCTCCCAAGATCGACGGC
GGCTGTCGGCGATCCCCGCCGCCTTCAGTCTCTGCCCTCGCCGTCTCCGGCAGCCACCGG
CGGGAAGCCACGCGCAACTGCTTGTTGACTGCAGCTAAGGGGGGGCGCCTTGCAGATCTG
AATGGTTTGGCAGTCGGCCAGTGGCCTCCATCTGTAAACGTCAAGCAGTGAGAGCACCAT
CACGGCCAGAGCTTTGCCACTGTGTGTGTGTGATCTCACCCGTCCGCACAGTGGTCAGCT
TGAATGCGCCGTTTCGGCGTGGTGGCGCGCGCTCTGTCTGGTCTGACCGACCCACCGCCG
CTTACATGGCCTGCAGCATCCCACGCGGACTCACACACCGTCGACGCCGACCGTGCCCAT
GCGTGCTGATGCTGTAGACACATGAATAAAAGGATAGCGTAAAAAGAAAGAAAAGATGGC
GATCAGTGGTGGAGAAGAGAGGAGATCGAGCCAGCGGTAAAGCGGATGACAGATTCAAAC
AATCCCATCTCCATCTGGCCGACCGAAAGCAAACAATTAGAGAAGGCAGCAACAAGAAAA
GGAAAAAAAAAAAAACTCGTCGATGGTGACTACGTTGAGTACCCACCGCAGAAGATGTCT
GAAGATGATAGCGCTGCAAATCGTCTTGCCAAAATCCAACTGCCCACCGCATGGGACATG
TGGTCAGCAAAATCAAAAATCAAAATTCAAAAAAATCGAACCGCCAAAGAGCGTGCGTGC
CCGTCGCATTTTCTCGTCGCCTTTCCCATTTTACGAAGACTAGAAAAGAAAAAGGCAGGC
TTTGCCTTTTGCCCTTTTCTTCCTTGCCAAAATCCAAAGCCTACAATTCACTTTCTGGCT
TAGCAAAGTGGGTCGTCTGCCCCGGCGAACTTTCCTAGAATTCCAAATCGAAGCAGCCCT
CCCGTGAAAAACCAACGATGGCGACGACGCGACGCGATCTGACCCCCATGCCGGTCCAAA
TGTCATGGTCATGGTGCCATGGTGGAGTGGTTAGTTAGCTCACACGCCTCATCCATTGAT
CCATCCATACGAACAAGTGTAATACTAGTAGGAATTTATATTACTCTAAACTACTCCATC
CATGTCACCGGCCATAGCTTTCCATCCATGTCACCGGCAATAACTCCCTGCCTGACACTG
TCACCGGAAGTGGGATGCTGAGGCCGCCTTCCTAAATACGCCTACCCACCCTCGACCTCA
ATTATACGGGGAGGAGGAGGCCCGGGCCGAGAGGGTATGTAAATGCCGTCGTCGTCGTCG
TCTTCGGAATCACAGCTCAACGAGACAGGGACGAGCAGCAGCGGCAGCTGGGGCGGCCTG
CCATGTCGTCTTCGTCCGCGGCGCGGCACGGCCCGTCCAGCGGCGGCGAGGCGTGGTGAG
TGTCGGTCGATCTCCTCTCCGAATTCCGGTCGGCGCTACGGTGGGCGGGGAATCGCGTCG
GTTCGCCCGGTGATTCTGATGGAATCTGCTGTTTTCGCCAGGTTCTGCACCACCGGGCTG
CCCAGCGACGTTGTGTTCGAGGTGCAGGACATGAGCTTCCATCTCCACAAGGTGGGTGGG
TTCTCTCTCATTCTTCGTATTGTCCCTTCTCTGCTCGACGAAATTCCGCTGAGAAGTTTG
TGTTCTGCACGCGCAGTTCCCGGTCATGTCCAAGAGCCGCAAGATCAGCCGCATGCTTGC
CGAGCAGGACGAGCAGCGTCCGCCGGTTCAGCGGCCGCGGCGGCAACGACGTGGGAGCTC
CGGAGGCAATGCCGAGGAGCATGTTGCGGCGGAAACAGAGATTGAGGAAGCAGAGGAGGA
AGAGGAGGAGGACCAGCGGCAGGATGTTAGGATGGAAGACGGCAAGTCGTACCGCATTGC
CTTCCCGGACTTCCCCGGCGGGCCGGGCACCTTCGAGGCGGCCGCCAAGTTCTGCTACGG
CGTCCGCGTCGAGCTCACGCCCTGGAACGTCGCGCCGCTGCGGTGCGCGGCGGAGTACCT
GGAGATGACGGAGGAGCACGCCGAGGACAACCTGGCCGCGCGCGCCGAGGCCTACCTTTC
GCGGTCCGTGCTCCGCCACCCCGGCGAGGCCACCAAGGCGCTCAAGTCCTGCGAGGAGCT
GCTGCCGCACGCCGAGGAGCTCGGCATTGTCGCCCGCTGCGTGGAGGCCATCGCCGCGCG
CTCGTCGGGGACATCGCGCTCCTGGTTCGGCGACCTGGCCGTGCTCGGCCTGCACATGTA
CAAGCGGGTGATGGCGGCCATGGCCGCGCGCGAGGACGTGAGGACGGAGGCTTTGGAAGG
CTGCCTCGTGTCATACGCCAAGGCCACCCTTCCCGGGCTGTCGAGGTCCATGCGGTGGCG
CCGCTCGTCCGCGCCGGTGTCTTCCGAGGTGGAGCAGAAAGACCTCCTGGAGGCGGTGGT
CGCGAGCCTCCCCGCGGACAAGGGCTCGGGGAGCGTGGTGACCGCGAAGTTCCTGTTCGC
GCTGCTTCGGACGGCGCACATCCTGCGCGCTTCCGACGCGGCGCGCGCGGCGATCGAGCG
GAAGGCCGCGACGCAGCTGGAACAGGCAACAGTGGAAGACGTGCTCATCCCGAGCTACTC
CGGCGCCGCGGAGACGCTCTACGACGTGGACTGCGTCGAGCGGGTGGTCAGGCACTTCCT
GGCCGAGGAGGAGCTCGGCGAGGACGAGGCGTCGTCGTCAGCTGCAATCGCCGAGGAGGA
AGCGGCGGCGGCAACATCGGCGTCGCGTCCGTCGGCCGTGGCAATGGTGCAGGTGGGCAA
GCTGGTGGACAACTACCTGGCAGAGGTCGCGTCCGACGCCAACCTGAAGCCCGCCAAATT
CTGCGAGCTCGCGCTGGCACTGCCGGACCACGCCCGCATCTACGACGATGGCGTCTACCG
CGCCGTCGACATCTACCTCAAGGTACGTACATTGCCCGATTCGCCATTGACTGCTACTGT
GACAAGTCCAAGAATGAATTCGCGTTTGTCGAGTAGCTGGCTGCCGACTCCATGACTATT
GAACGGTGCATGTACGCGCAGGCGCATCCGCGGCTGACGGCGGAGGAGCGGGACAGGGTG
TGCGGCGTGGTTGACTGCAGGAAGCTGACGGTGGAGGCGTGCACGCACGCGGCGCAGAAC
GAGCGGCTCCCGCTGCGCGCGGTGCTGCAGGTGCTCTTCTTCGAGCAGCTGCAGCTCCGC
CGCGCCATCGCTGGCACGCTCCTGGCGTCCACGGCTTCCCCGCGAGCGCGGCATCCGCAG
CGTCCGGCGGCCGCTCTGCGTCACGCGGCTGGCCCGAGCGAGACGTGGCGGGCAACGGCG
GTGCAGGACAGCCAGGTGCTGCGGCTGGACATGGACGGCATGAGGAGCCGGGTGCAGGGC
TTGGAGAGGGAGTGCTCCAGCATGCGGAGGGCGATCAAGAAGATCGACGGCCGCAGCGGC
GGCGGCGCGTCGCCACGCAGCGGGGGGGGGGGCCCCGGGGGGGGGGCGGAAGGGGCGGGC
CTCCCGCGG