| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_134102
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_3872 |
1 |
782 bp |
MLOC_3872.1 |
Available |
Available |
LOC_Os05g02060.1, FRAME:-3, EVALUE:5e-64, 13105.m00159 protein mitochondrial import inner membrane translocase subunit Tim17, putative, expressed |
CDS Structure of MLOC_3872
Contig Sequence (3453 bp)
>contig_134102 3453 assembly3_WGSMorex_rbca.fasta
ATTGGAGATTATAATTGTTTTTCTCTAGTTGCAACGCACGGGTCCTTTTGCTAGTTATAT
CCAATGCCCCGTCTCCTATCTATCATCCTCTGCATTGGGAAAGAGAGCTGAAGGCTGAAG
CAGAGCATCAATATTTGTACGGGTGTTCCTTTTCAAACAATTTGAAACTTGAAAATTCCA
TTTTAACACTAATCAAAATATGGGTGCTCGGTCTCTCCCTTGTTGCAGAATGCTCGTGTG
TTGCGCCCTTTGGTTGTGCCCGATGACAACTTGGGGATCGAGAGGGGAGCCTGGTTTCAT
GGTAGTTGTATTGGTTTTCATTCGTTTTTTCGTTAAATAACTTGACAGTTTTTTAAATTA
ACTGATGAGATAAAACTTTTGCCTCCGTAAAAAATATATATATGGAGGCCAGGACCATTT
CTCACCTGCCCTACACAAACAAAAATGGCGACTCCGCTGGGGATCGAACCCAGAATCTCT
GGTTTCGTAGACCAGCGCCTTATCCATTGGGCCACGGAGTCCTTGGATGATGAGCTCAAA
CGTTGAGCCTACTTAATTAGACGCCGCTCACCAGGGCTTTGAAAAACTATGCTAGTAGCA
AACTAGGCCATCCAGCACAAAGGATATCATCACACGAAAATAAGTTGTTCAGAACATGCA
CATGAGAACGCCGGCGACGAAAAAACGGAAGAACATTTGGAGGAAACGGGTTCAGTTATT
AAACACGGAGCGCGGACGGCTTCAGTCAACAAGTTCTTATTCAGTCTTGTCTGATATAAA
AAGGAAACACCGCTCTGAGTACGGTCGCACGGCTAGGTGAGGTAGTTGATGAACTCGACG
GCGGTCGCGATGGCGCCTCCGGTGATGGCGTCCTGGGCGATCTTGTTCCCTTTGTTGTCG
CTCGCGGCAGAGATCAGGGCGCCGCTTGCGATGCCTCCAATCAACGCGTTTTTCTGCGGG
AGTGCCGGAAAAGAGAGAGGGGTTAAAAAATATTCTCAAGACTGGCCGAAAACATGCCAC
CAATGATGTTGGTTATAAACTCAGTAATGTTTTTGTGGGTAAGATCTCCAATGTGCTAGC
ACAATACTACTTAGACTTGCATAACCTTAGGACAGGGTCTGGACTCTGGAGACAGAAGTA
GGAGTAAACATTAGCATCATGATAATGAGACGCCAGTGGTTTGATTGATTCTTCTCGTAC
ACTAATTAGCCAAGAATCTCATAGTCAACTAAAGAAAGGATCTACATTGTAAAATGGGAC
AGAGGCTGTCATGCAGATAGATATCCCTTCACCCAAGGTTCAGTTAAAGTGCAAGAAACA
TGAAAGGTCCATTTTGAGAAAATAATTACCCAGTCATACTGTCCGCGGACCCTTTCCACT
CCATACTCCATGCCTACATACACTCCAGCAACAGCACCTGCAGATTAGTGGAAGAAGCAT
CCGAATGTGTCAGCGAACATAAGAAGAAACGGATGAATGGTTGATGTCAATGCATTCGTC
AAAGCCAAATAAAACAACAGGGTAATGCTCTTCTACTTAGTTACCCCAATATGCGCCCTC
CTTGCACATTTTCTTCAGCTGCATAAAAAGACCAGAATACCATATTAGTACTCTGTTGAT
GATAGATTAGATAACCATTAACCATAACGCATGCGCAGAAACAAGGCCGCCGACTTTTCA
CTCATCCACAAGTAGAGAGCAATTATGCAAGAGTAGTGGTTCAATGCCTTGGACTTCTAG
TTCAGCTGTTTTTTCTCCATTTACTTATCCTACGAGGGTCTGCAACGTTCAAGGCACCCC
CTATTGAACCATTATGAACTGTTGAACATTTAGCCAGTTCCTGTCTAGTTCTCCCTAACA
ACAATTATTTAGGTACAGAGGGAATAGAATAGAATATATCATCTGCCTATATCAGGCCAC
TACTATTACATTATACTACTAGTGTAATACTCCCTGATATCTAGTTGCTTTACCATTGGC
AAGACTCAGGGACAATTAAGTGGGAGAAAAACAAACGCAGCGGAAATCAGCACTTACTGT
CTGCTCGAGCTTGCGCTTCGAGACACTCCCTGCAAAGCAAAAGAAGATAACTTGATGTCA
CATTTGCCTGCACTCTGCACAGCACCAACAAGAACTGATGTATGTCCCCACTGCATCTGT
ATGCTGTGAAAGAACATTTGGTCCGAACTAGAATCCGGGCGGTTCCGAACACAAGCCACC
TTCATCGTTCAGAAAAGAAAAGAAAGGGGAAAAAACCCTTGATTTTCTCTGGCAATCCTT
AATCCATCAGAGACGGGGATGCGTGGCGTGGTTAGTTTACCACTTTGGAGGCAGTCGAAG
GCGTCCTCGGCGGCCACCCTGCAGGCGCCGACCTGCGCACGGCATCAGCCAACCGCGGAT
GGATCAGACGCGTTCGGTGTGTATGTATGCATTGGATCAAAGAGGAGGAGGATGGGGGTG
CGTACGGCGCCGATCTTGAGGAAGCCGTCGACGGTGCGGTTGAGCAGCGGGTTGCCGAGG
TCGATGGCGATGTCCACCTTGCTCGACCCCGCCGCCAGCCCCGCGCGAGGCATCCTTCCG
GTTCCGGAACCTTCTCGGCCGGTCTCCCTCCCTATCTCTCGTCTAGCACTCGGCAGTCGG
CACACAGATACAGAGCAAGAAAGAAGATAGGCCACATTATCCCCATTTGTAGAGAACTTT
TTCAGCAGCAAAAGACAAGACAAATTAAAGTAATGCTTTTTTCAGGATGGAGAGCCATTC
CCAGGTTTGGCCCAAAGCAAACTAGGTTTGTTCACAGCACACTTAAAGCACAGGAACCCC
TTAACAATATTTAAAATGTACTGTCTCCATCTGAAAATAATTACCGAACAAATGGATGTG
TTTGAACACATATTAGTTCTATACACATCATTCTTATTCCATTTCATCGACAAATGTATT
TCCGGACGGAGGGAGCAGAAGCTTATTCCACTCACTTTCCCTCTCATCAAAAAAACTTCT
GCTCCACGAAACAAGTAAGATCGTATTAAAATCTCTCGGATTGAGGACACACATCCCATC
ATATTTCCTTTGCTTTGCGATACTTTACAAAACCCGAAATGAGATATATCAATATTCTTT
TGAGTCATTCTCATGTTCACTATATGGGCCTACTTTCGTTATTCATTCTTGTTGACATGT
ATCGACATCCCCTTGACCTAGTCACCTGTGTCTGGCCAAACAATGACGGACGTCGTCACA
TGTCGATCAGGGTCTTAAGAATATCTTTTCATTGTCGGAGGAGCAAATCCCATTCTTGAG
CTATCTAGCCCCTTATCAAACTTTTGAATGAACCTGTAAGTTGTTGTTATGATCACCATG
TTACATATGACGTTTCAACAACCCAAAGTTCATCTTACGGTAATAAGTAACTACGGCACT
CTCATGGTATAAGAGCATCTCCAACAGGCGCCC
