| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_133785
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_3822 |
1 |
918 bp |
MLOC_3822.1 |
Available |
Available |
LOC_Os12g02290.1, FRAME:-2, EVALUE:9e-39, 13112.m00157 protein LTPL23 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
CDS Structure of MLOC_3822
Contig Sequence (3475 bp)
>contig_133785 3475 assembly3_WGSMorex_rbca.fasta
CATTTTTCTAATCAAGTTTCATATATAACATGTTTAAATTTGATTTACGGTTTAAAAGAT
ATTGTTATTTAAAAATACATATTTATTCTGAATGGATTTCGAGGTCATTAACGCATATGT
GAGGGGTGTAGGTAAAAAATTTAAAAAACGATTCGTTCTGAATATAATTTAGACTGCGGG
TTATTTAGCACGAAAGTAAGGGGGTTTGTGTAAAATGTGAAAAAAAGGTTCAGCCTCACT
TAAAAACGTACCGCGGGTTAATTAGATGAAACTACAGGGGTGTTTTTACAAAAATGCCAC
AACGGACCTCAGAAACAATGCGTGCTTTATTATTAGGGAAGAATTTTGTTAACGTGCCAA
ACGTTACCCTTTCTTAAAGGAGTGCTTTATTATTAGGGGAGAATTTTGTTAACGTGCCAA
ACGTTACCCTTTCTTGAAGGAAGGAGTAGGAGAAGAATTTCGGTGCGTGCAGACCGCGAT
TCATACATGATTTCATTATTAAAGGACCATCTTATATTTCGCTTGTAAGCATGCATTACA
GAGTTCCGACAAAGTACACGAGTTCCCTCGGGAGTACAAGATCACAGCTCTCGTGGCAAC
AACGGCCACAACGTACGAACGAAGCTGCGGCGGCAGCAGCAGTAAAACTAATTTATTATG
AGAAAGCGGTAGAACTAGTAAAGCAGTAAACTAAACGCGGTGGAGCCATGCATGCATCCA
GTACTGCTAGATTTTTTATTTTTTTTACGCATACAGTACTGCTAGCTATAGCTAGCAAGG
ACGGGGCTTCCACAATTTATTTCGCTCTCACCATGCAACGCTTAACGCACCCTGCATACA
TTAAAAAACAATCATTGTTATTAATTAATTAATTAACTCATTTGTCCATGCATGTAATTA
TATAGATCTAGTACAGTATCAAACGTCCTAAAAGTCGTAGCATTCGGGTAACTGGGTAAA
TAATTACTTGGAGCAATCGGTTCTGGGGCTGATGGCGTAGGGGATGTTGACGCCGCACTT
GCTGGGGATGCCGGCGACGAGGTCGGGCTTGATGCCGCCCATGCCGCTCGTCTGCTGCTT
GAGGCAGGTGCAGGTGGCTTGGCGGTCGGCGGGGGTGGCAGCCGCCGCGTTAAGGCTACG
CACGCCCGTGCAGCAGCCCCCGCCAGGTGCACGCTCCCTGCCCATAGCGTAACCGATACA
CGGCGCCAGGTAGCTCACCACCTGACCGCAGCTCGCAACCGCACCCTCCGCCGGCGCCGG
TGCCCCAGACAGCACAAGCGCCACCACCAGCAGTGCCATGGTCGCGGCTGCGTGGGCACG
GCGAGATGCCATGGTGGAAACTAGCTAGTGTGCTTGCTTTGTCGGCTTAGTCGGTGCGTC
AGTGAAGGCTGAGAGACTGTGAGTGAGTGGGTGAGGCTTGGGGAGTGGCTAGGAGGGTTT
TTATAGGGGTTTTGGACCCGGCAGTAAGTGGTAACAAAACAGTTATTACTACGCGGAGTA
CGGTGGAGAGCTGGCTGGTGGTGGTTGCGACGTATCTCTTCACTTACTAGGGATGGAAAT
TCATTCAAGGCGCCTGCATTCTGCAGATGGCAGGAGAGTCGTGTCGACGTCTAACATATC
TCTTCACTTATCTCTGCATTTCAGGAGGGCGAGGATGGAAGCCCGCACTCCACTGTCCGC
GTACGCCACGAAGCCTGCACTCCACCGTGCACATAGGTCCGAAGCTTTTCCCAGATTTTT
GTTTCAACAAGATCCAGAACAATTATAAAGGTTCACTGGAGATGTGATCTATTAGAGCAT
TTACCAAATCCGCCGATGTGATCTATTAGAGCATTATCAAATCCGACCCCACGAACACCC
GCGCATCCGGGGGCGTCCACGAACACTTGCAAGCCACGCCTTAAATAATACAATTTACAT
TCGGACACCTCAAATCTCAGTGGACAAATTCTTCCGTCGGCCGAGCGACAAAGTGCAATG
CGAACCGTCGTTGCCTCCTCCACTCCCCACTGGACAACCCCCAGTTGATGGATTCGGATT
AGTCGGAGTCGGATCCGCTGGAGGCCATGCCGGAGAAGGCCGAAGATCGCCAAAGATGCG
CTTGGGTGGCAGATGGGAGTGGAGTGAAGTGGCTAGGGTTTGATCCGGCCAACGGATAAG
GTCGAATATATGTGGGGTAGATGCGGCCCAGTGTGGACCAGGCGGACGTGTTCGGGTGCG
TCCGGGCTCCCCATATCCGCCTCATATTTGGGCTGGAAATGGAGGTGTCGATCAGCCCAG
GCGTTTGAAGACGATTTAAGAGGTCCGTATGAATCGAATTTTTATAACCGGACAGTGACC
GAATGTCTTGTCCGAACGTTTGAAGAGGATTTTAAAAGTCCGATTATAGATGCTTTTAGG
ACTTCTTGAGCACAATGATAAGATTTTCAATATAGGACGCTTCATTATTTAAAAGATTTA
AATATTACATCCAACATCTACTAATTTACAAAACTAAAAAGCATACAATACTCTAAATTT
AGAAAGTAAATGAATAAATACAAGCAATCATAATAAGACTGTATGGCACCTAAATCATAG
GAGGGCAAATTCTAATATCATGCTACCATCCAAGCTGAGTACACTCGCCGTATTTTTTAA
GCGTGCACATACCTTCGTAAGTACTCCTTAGTTCCAAAAAAAACTTGTCGAGAGCTTAGT
TTAAATGTACTACCTTCTAGTTTTAAATTTCCTACTAATCTCTCCCTCAACTCTGCTTCT
TCCTCACTGCCGTCATAGTCACCGTCGACAGCTGCCGTAGAAACAGCTGGCGACCGTCGC
CCACCTACGCTGCTTCCCAGCCACGGTTGCTCCGTCACTGCGCATGTGTGCCGCCCGCAC
GGAGGCGAGCTGCCCGGTCGCCCAACTTCGGTTGTTCCTCCAAGACGACCACGTCGACGG
ATGCCTCCTCTTGGAGGCCTTGGTTGCCTTCCTGGCCGGTTCCTTGCGCTCGCGCGAACC
GCGTCCGCTGCTGCCAACCCCGGTAGTCGCTCTCCTCTCGCTATATTTGGTGGGCAGGGC
CAAGCAGATCTTCCTCGGTGTGAGATTCATAGAAGAGGTGTCTATGGGGTTGAATAGGCT
ACTTGCATAAATAAAAATCCTAGCCTTTATTCCAATTCAATGGTTGGCAGATTTTAACGA
TTCTAACAACTCTAATGCATCCTACACATGCTAGTCAATAAATATGGTTGTAAAAAGTAA
AGACTTCACACATGTAGTAAGGAATGGAGTTTAGGAAGATCAAACGCAAAGAAGTTGACA
CGACAATTTTTGATACGGTTTCGATAGGTGGCGTTATTGGACGTCCATGTTAGTAGAGAC
TTCAACCCATGAAGGGTAACGACTACGAGAGTCCACGGAGGGCTCCATCCATAAGGGGTC
CACGGAGAAGCGGCCTTGTCTATNNNNCCACGGCTTCCGCCCACGAAGTACTAGC
