Contig Data
morexGenes
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Map Locations of contig_133523 (5365 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_133523

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3792 5 1938 bp MLOC_3792.4 Available Available LOC_Os08g33810.1, FRAME:+2, EVALUE:5e-139, 13108.m03528 protein lipoate protein ligase, putative, expressed





CDS Structure of MLOC_3792






Contig Sequence (5365 bp)

>contig_133523 5365 assembly3_WGSMorex_rbca.fasta
GGAGGAGGCGGACGGGGAGGGGGAGTTGGACACGGAGGCGACGACGAAGGTGCAGGCCAG
GGCTACTGGCTCCAGTTAATTCTTCCTAATTTTCTGTACTTGATTTGCTCCTTTTTTTCG
TGAGGTGCAACAGTTTTTCGCTGTAGGAGGAGGTGGAGCACGGTCAGCCTTAGTTAATTT
GATAAATGCACACGGTGGTGGTGCATGATGATGGAAGGCCGTTAGATTGTAATTTGTTGT
CTAATTATGTGGTGGTGATTGGTGTTTGTTTTTGTGGGGATAATAGTTGTGTGTACTTAA
AGAAGTTTTCGTTTGATCTTTTATTAGTAGTATAGATGTTTGGCCGTTAATAGCTATGTT
GGGCCGTTAATCTCGTATTATCAGAAGGAGAACCGAACGACTGACCCAGAACGTCGACGC
AAAAAAAAGTGGGGGAAGATCTCGACGACGCTCATCTCACCCTCGTCGCCGGCTCCTGCC
TCCTCCTTCTCATCGCCGGCTCCTGCCTCCGGCAGTCGCCGTCGCCTACTCCCTGCCCCT
AGTCCCGATCCCGCGCCGTCACTTGCCCATTCCCTCTTCGCCTTCCATCCCGTGCCTCCC
CCATATCCCAGCCGCCTCCGCTCAGTCCTCCCCGCGCAGAGCCGCCGCCGCCGCCTGCCT
ACGCCCGGACGGACTGCTGGTTGACAGGCTCCAGTCCAGGACGTGGCTGATACAGTGACA
CCTGGGGCCCTGCCGTTCCATTGGGCTAGCGATCCGAGGGACGAGACGGGCGCACACCAG
GTGTTCGAGGGAATGCACCTCTGAAACGCCTCTTCCCACTCTGGCCTCCGCGAGACGAAC
GAGCAGAGCTAAGAATGACGTTCGGGTCTGTCATCGAGAGGAGCGTGGCGCGGCCGCTCA
TGAGGCTGGTCACCATGGGCGGCGCGCCCATCCTGCAGCAGCTGCACCTGGAGGAACGGC
TGCTGCGTCGCACCAGCGATAACTGGTGCATCGTCAACGATGGCACGGCTCCTCCCACCA
TTGTCATGGGCGTCTCCGGGTAATATATCCTCTTTGGTATCCTCGGTATGTTGCCATTCA
TTCGTGCGTGCCTGCTGTGGTTTCTCACATGGGTTTTCATGCCAACAGGAAGGTCTCTGA
GCTCGTCGAGATACGGCCTGTGCTTCAAGATCATGTGCCGGTGGTAAGGCGGTTCAGTGG
AGGTGGCACTGTAATTGTTGACCAGGGGACGGTGTTCGTCACCTTCATCTGCAACAAGAC
TGCTGTCGCTGGGTTGCAGCCGTTTCCTCGCGACATCATGTCATGGACAGGCCAGCTTTA
TGGTAAAGTGTTCCGTGGGTTCGGTGAATTTCATCTGCGTGAAAATGGTATGTCAAATTA
GCAGACTATTTCACCACTGGCCAGTTACTTTTGCAATGGAGTTGTTTTATTTTGATCAGT
GAAAATTATATCATTGTTCCTAATCAGGCCTTTGATTACGCATTTGCACTGACCATTTAT
ATAGTGCTGTACGCTAGCTATTCTCGAATTCCTGTACCGATCTTACTCAATCGTTCATCC
TTTTTTTCATCTGTATTTAACTTTATTGACTCTATTAAGGTCTCCAAATGTCTCAGGGTT
TCCCACCGGGCATGTTTTGAATTTTGACCAGTTGCATCGCAAATCCTGAATCTACTAAAC
TGATCCCTATAGTCTGCAACTTTAGATAGCATAGATTGAAATAAAACCATGGGCTCACAT
ATCACACAACTAGCAATTCTGATCCCCATTGTAATGTTTGATTCTTGTTCTGAAATGTCA
CATATAAATGCATTCTGCTCTGTTTATTGTCTTGCAAGCTGCAATGGTTCCTGGAATTAT
TTAATGTAGACAGAAGTTACTATCCTCTATTTGACATATCTCTTTCCAAATTTGAAATTT
TGTTTGTAAAAAGTCGTTCCTGGATCTAGCATATATATTGGATATTCAGGGATGCCAATT
TGCAATGTACATGTGATGTATATCTTTCCAAGGCTGCACTCATGTGTGCATTATTTTTCG
CAGACTATGCATTCGATCATCGAAAGTTCGGTGGAAATGCTCAGTCCATAACAAAAGATC
GTTGGGTACACCACACATCATTCTTATGGGATTATGATGTGAAAAATATGAGTTACCTAA
AAAACCCACAACGTGCTCCTGAATATCGGCAGGTACAGTTATTTCTGTCATATTTTGCTT
TGCTTTGAACCAACCAACGTATTAGTTTTTGTCCTTTCTAAATAGAATATGGATTTAGAG
ACCTTAACACTAGCTAATTATGTACATATCGGCTTCTATTTTTTGTTATGTTACCAAATT
TAAGGTTGGACAGTATTGGTATGTTTCTCCAAACATTGGGAAACGAGTTGATCTATCAGT
AGTGGTCCAGTGGCTATCTTGGCTATGATTTTACTATTTTGTAAACAACTGAGGATGACA
AATATGTAAACCACTGAACTGTCAACTGAATTCTTTCGAATAAAAAAACTCGGCTTAGAA
TAGACACACTTCATAAAACTTTGTGCTATCCTTTGCACAGTTTACCCAGGAGCAGAGTTA
CACGGTCTCTTCCAGCTTTGGAAATACCAATGATGGTTCAACTGAGAGACGGGATAAGAA
AGTTTAAGAGCGAGATTGCAGTTTACTGTTTATTGATATTGACACCTGAAGGGCGGATAA
TTCGAGGGATTTCAGTGTAAGCATTTATGTGCACATCCTTGAGATATGTAGCTGAAAGCA
CTGAGTTGAGTATTACATACACTATTACCACCAGTTATTGGCTGCAGCGGTCTGGCATTG
CTGAAAACACCATGCAAATTTTAGTGCCAGCAAACAACATTTCCCCCCAGGAATCGGCTT
ATTTCTGTCGAAACCCTGGCCGATTAGCTTTGATCCCCAATTGGCATAATGAGCATTGAG
TACATCCCAGTCTTTCATAGGTATAATAGCATTGTTATTAGTTTTGTGATGATCGGCTGA
TTCTGGGAATTTTTGTTCTAATGAAAACAGGCCTTCATTTTCGAAAATCAGAAACAGTGA
CATTCATTATCCTGCGGTCTAGGCCTTTCCTTACTTGCCTAGGAAGTTCAGCCATGTCGA
TCTCCAAACTAAACAACTTGTTTTTTCAGGCGAGGGACCACACTGATTTCCTGTGCCGCA
TGAACGAGTACATGCCATCACGGTCGGTCTTCACTGAAGGCATAACTGCGGCCCTTGGAG
ACCACTTTACGGTTCAACACACGGAGCTAGAGACGGCTCTCCCTGACCACGATGACTTCG
TGCCTTCTACGAAGGTGCTATCCCCGCAGGACTTACAAGACATCATCTCTGCGAAAGAAA
CCCCCACATCACAGAGAGTTCAAGGATGGCCACACTGACGAAGACCACTGCTTGTTTTAT
GACATATGATGGATCTTTTTTTATGCCACACTCACTGCTTTCACTTGATTTTGAGAAATC
AATCAATCAGGAGGCGTGTTTCCAATATTTTTGGCAGGCTTATCTATGCTGTTGCCTGGT
GAAAATCGGTGATAGGGTTCAGACTAGGCTTTGGGGTACATGCTTGGTTGGCAAGCCTGA
AACTGTGGTATGGGTCACCTGCAGGTTTTACTCTGTACTTGCTACTCTCTTTAGTACCTT
ACGTAGTTACCTGAATGGATGATGGTGGAAAAATGAAGATTCCAAAGAAATATACTAGCA
GGGTAGTTTTTCTTTCCTTTTCTTTTGCTATTCATCGGTGCATTTCATTCCTCAACAGTA
AGGTTACAACTCCTTGACGAGGTGCAATCCGTGCACAACATGAAAAGGGATTATTGAAGG
CCCTGCTCGACTCCTTACTGTCACGGTGTCACCCATGATGGCCGCATTTTCAGAACAACG
CTGGAAAGGCCCGCACAGAAGTACTATCTCCAACGCGGATCCCTAAAACGGACACACATT
TATCCGCGGACTGATCCAAACTAGTTTGCGCTTTGCAAACACTATATCTGGCCATGTGCC
GGGCCTAAGAAAGCCCATAGCAGAAAACTGAGGCCCAGGCCTAGCCTTGGCCCTACCATC
AAGCCTACTTTCCAAGCCCAAGCCCGGCCCATCCGTTGAAAAACCCATTGGGCCTAAGGT
CATAGGCCGGACTTGTTTTTTAAAATCTCAATATGCCAAGCCCAAGCCCAGTTTAGCCTT
GTTGGTGGGCTCAAAACTTAGGCCCATGCTCGACCCATGGGCAAGCCCGTCGGGCCTAGG
CCCTGGATTTTCGGGCCGGGCCTGGGCGGGCCGACCGGGCCGGGCCTTAGATGGCCAGGT
ATAGCGGACACTGATAAGAGAACCGACCATCCAACCATGCCCACATACATTTGAAACAAG
ATTTAAACAAACCAAATGATTTTCATGTAGATAATTTTCATCTAAATCGAACTAAATTTA
TTACATTTTCAATATATTTAACTGAACAAAATCGTTTGGAAGTTAATCTAGTCTAAATCT
TCACACACGATCATGGGCCCAAGAAAGCATTCAGCCTCCAAGTCCTTATTGTTCCCCTTC
ATGTAGATGCCCATTGGTCGTGAGCCTCGTGAAGTGAAGGTGTGGTCGCTTGCAAGGAAG
AGTAGGACATGGGACATGAACTAGCCCACATGAGACACGAGGGGCCGACGTCTTCCATGC
ACTACTCCTCCTTGTCGGTTCGTAACTTGGTCGTCGTTGGTGGGGTTAAGGTCGATGATG
GACGTGGATGGGCCGACCTCGTCGTTGAAGCGGCGCCAATGGACACGAGTTGCGGCGTGA
ATGATGCACAGCTTGGGACGTTGGTGTTCGCGGTCGCCAGCGCCGCCTGAGTGTCCGATG
CAGCCGCACGAGCATTGCGTGTGGTCTCGTAGAGCGCCCCTGCTACTCAACAAAGTTCCG
TTTCTTCGCCACCATGGCCGTCACGGACTCCTCACTCGCGAACTTGTCTTAGATTTGGCC
CTCAACCAACCGGTGATGCATAAGGAGGTCGAGGTTGTAGCTCTACTCCTCCCGCGCTTG
CAGGAACGCCGTCGTCGTGTGTTCCCCCGCCATCAAGGCGTCGAAGTGCATCTGCGCCTG
CTCCATGGCCAAGACAACATGGAACGACGCAAGCACGGGCGTCGGCCCATCGTCGGAGGC
CACCTCCATGGTCCGCTTGTTGTCGGAGACCTCCCACAAGCTCGACGGCGATTAAGCTCT
ACACACGTAAGGTTCAATGACGCTAGAGTTGTTATGGGAATAATACATGTGGTTACCGAA
GGTTGTTCGGAGTTCCAGATGATATCTCGGACATCATGAGGAGTTCCGTAATGGTCCGGA
GGTTAAGATTCTTATATAGGAAGTG