Contig Data
morexGenes
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Map Locations of contig_133487 (2745 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_133487

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3789 2 2274 bp MLOC_3789.2 Available Available LOC_Os08g31760.1, FRAME:-3, EVALUE:2e-84, 13108.m03292 protein expressed protein





CDS Structure of MLOC_3789






Contig Sequence (2745 bp)

>contig_133487 2745 assembly3_WGSMorex_rbca.fasta
TGAAATAAGATAACAGTCCATTGATCAATTCACGTAGCCTCTTTGTTTTACTTTGCTTGT
CCCACTTAATTTCTTATCATGATGAAATTAACAATGAACGGGTTGATTTCTCAAAAAACT
AGAGTAGGACTAACTACATTAGTTAGTTAGCTTATTATTTTGATAAATCAAAATGATTAT
AAAAAGATTAAAAGCGTGTGGTATTTTTTTTCTTCCGTTGCAACCGACGGGCCCTTTTGC
TAATATTTCATCATGGAAGTTGACAAATATGTAGCAATACGTACATATATGTGTTCATGT
TCTTTTTTTTTTTTAACTTCTACAGTTTTTTATTTCAATTTTTGGGGTTTCCTGGAGCCG
AGTGTCAATAATCATCACTCTAAATAGTTTGACTAATTTGGTCCACAGTGACATTACACC
CCATCTGTACTCAAACCAATTCAAAATGAGAAAGGGAAAAACGAACAAGAATAGTTTTGC
TTTTCCTCGTCTTCTCCTTGATCTTCCAATTTCCCCCCTAATCCCATCTTATACCCAAGC
CCTTTGGCTTTCACTATATTTTAATGTTTGCACATAAGCCCCTAAAAAACATCAATCCCT
CAGCTCTTCTTCCACTCCTCGGCGCCGGCGAGGTAGGCCTTCTTCCTCTTCTCCGCTCGC
GCGCACGCGCAGATGATGACGAAGCACGCGGCATACACTGCGTACACGCGCCAGTTCGCG
CGCGGGGCCTCGCCGGCGGCGGCGCGGTGGAACACCGCGGCGTAGTAGTGGAGGCCGACC
GCCAGCCCCACCACCATCTGCGCCAGGCCGAGCGCCTTGGTGGCGTCCGCTCCGCCCTCC
TCCTCCTCCGGCGAGGCGGCCCCGGAGAAGATGGCGACGAGGTCCACCATCTGGAGCACG
AGGTAGCCCATGAAGCCGAGCGACTGCGCGGCCTGCGTCCAGGCGTAGGCCGCGGGCGAA
GCGGCGTGGAAGAAGCGGAGCGGCTCCAGCCCGGTCGCGGCGGCCGCGAGCGCGAGCGTG
CCGAAGTAGATGGCGAGGTACGCCTGCGAGAGCAGCAGGGCACGGTGGAGGAGCGGCAGG
TACGGGCCCATGCGCCGCACCAGCGCGGTGAGCATGCACAGGGGAAGCAGCAGCAGGGCC
ACCGACGCCGCGGAGGCCGCCGCCGCCCCCCACCGGCCACCCAGGACCGGCCGCACACCG
CCAGCGATCCCGGCATTGGCGGCCGAAAGGTACGCCTTGGACGTGTACGACAGCCGAGCC
AGGTCCGGCATGAGCGTCTGATGCAGCCGCGCCGGGAGGCCCCGGAACTCCGACATGAGG
TCCTCCGTCCCCTCCGCCTCCTCCGCGAACACCACGTCCTCCTCCACCCCGGTCACCTCC
TTGCTGGCCACGGTCGAATTCGCCTTCACCTTCCCGTCGGCGGCAACGACCTTCGCTTTC
TTAGTCGAATCCACCTTTCCGTCGGCGGCAACCTGCGCTTTCTTGCTCGACTTGGTCGAA
CTCGCCGTCGAATTGGACGGCTTCTTGGCCTTGGGAGCTCCGCCCTCAGATTTCACCGGC
TTGGCAGCGCCCGCCTTGGTGGACTTGGCAGAATCGGCGCTCTTGGGCTTGGCGGTGGCC
GCCGCCTTGTCCAGCTTCGGGACCTTGGGCTTGGCCGCATCGCCGCCCGCTTTACTGGTC
GGCTTCTTGGTCGTGGTGGACTCCGCTTTAGTGGTCGCCTTCTTGGTCGTGGTGGACTCC
GCTTTAGTGGTCGCCTTCTTGGTGGTGACCTTGGTCGTCGCCGTGGTGGACTCCTCCGAT
TTCTTGCCTTTCAAGACCTTGGTCTGATTCTTGGCGCCAGAGGAGGAGACCTTCTTCTTG
ACGCTGGCCGCCGCTGCGGTCTTGGGCGGCGGGACCGGCTCGTCGTCATCGGTGGACACG
AGCTCCTTGCGACCGGCGGAGAGCTTGGGCTTGGGCTTGGCGGCCGGCGCGGCGGAGGAG
CAGAGCGCAATGTGGCAGCAGAGGAGGGCGAGGAGCAGGAGCAGCAGCACCGGCCTCGGC
GGCGACCGAGCCGCCATGTTTGGCAGATCTGGCCGGGGCTTTTGGGGGAGCGAGACACGG
CAGCCGCGGAAGAGCTGGCTAGATCGGGAACGGGAAGAGTGAGGGAGGGTTAAGGTATTT
TCGGCTTGATTTATATGTAGGGAAATTGGAGGCGAAAAGGGCCGAAGAGGAGAGGAAAGC
TGTGAGCCGTGGCCGTGTTGCGGTGGAGAGTGTGTGAGTGTGAGTGTGATTGTGAGTGAG
TGGGGAGCGAACTACACCACCACCGCTGCTCGGTGAGTGTGGGTGTGAGTGGAGTGGGGA
GCGAGCGAACTATCTAGGACGGTGTTTGGCACGGCCGGTACCGGGGCACATGACCGCGTC
CACATAGACATGGTGCGTCTCCTTCGAATCGTCGGTGGACTTTTACCAACTCATTGCGCG
CATACCCGTCCCAGTCTGCCAGCACGACAAATCAACGACCTGACAGGTTTTATTAGGCCA
ACTCCACCGCACGACCCATTCTGTCCGGCCTTATTCGTTTGGGGTAAAAGAGACAAACAT
GTCGGCCCAACGCGAGACGGTCCGGATCCATCTTGTCCGTTTTGTGTCCGGCACGACCCA
TTTCACACGCAAACTTGCGTGAGATTTGGGTCGCGGTGGACATCAAAACTACCTCCAACC
CGCCCACATCAATGCGCAAGAGCGGCCGGGCCCGCCTGTCATCCG