Contig Data
morexGenes
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Map Locations of contig_133316 (4811 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_133316

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3765 1 320 bp None Available Available None
MLOC_3766 8 2472 bp MLOC_3766.3 Available Available LOC_Os10g02210.1, FRAME:-3, EVALUE:0.0, 13110.m00119 protein peptide transporter PTR2, putative





CDS Structure of MLOC_3765






CDS Structure of MLOC_3766






Contig Sequence (4811 bp)

>contig_133316 4811 assembly3_WGSMorex_rbca.fasta
ATGAGGGAGAAGAGGAGAGAGAAGGGAAGCGGGCTCTTCATAAAGAGCCAGCTCTAGCAC
GTGCTCCTAAGTGCTTTGTTATAATGAAAGATGAACCATATATGATAAAAGTAATACTCT
TTTATAGCTAACTATTGTACAAGCTAGCTATAAGATGGCTTATAACCAGCAGATGACTAT
ATTATTAACCATGCTCTGAGGGTAATATATTCACGTGTGGAAGTTCTGGCCCGGTGACAG
TTCAAAAAATATATTTGACCAAGTCTTACCTACTAATAAAGCAAATATTGCTTCTGCCGT
ACGTCATTCAAATTGCCCCTAAAGTTGATTAAAATTACCCACCAATGCCACCGATAAGTC
ATAAAAAACGTTTCAAATAGGAAAATCTCTGGACTGGGCCGGCCCATGTAGGCACCTCCT
ATATTACGCTTTGGGCGTTGCAAAAAGATGCAACACACCAGTTTGGGCCGGCCCATGCGT
GGGTGCCTGTTATTTTTGGTTAGTTTTTTATTTTTCTTTTCAGTTCCATTTTGTTTTTGT
ACTTTAAATACTTTAGAACTTCAAATAAATTTTCTAAATTTTAAGAAAAAGATAATTTCG
AAATAAAATATTCAAAAAAACATAAATTTTTTGAGAATTCAAAAACTACTNNNNNNNNNT
GAAAAATGTTTGCATATACAAAAATATGTTTAAATTTTGAGAAAATGTCCATAAAATAAA
AAATTCAATGATTTTAAACAAAAATCCGTTTAAAAATCTTAAAAACAGTTTGTGCCTCTG
TTTTTAGTCTGTTTTTTATTTTAATTTTTCCGTTCCAGATTTTAATTTAAATAATTTAGA
ACTTTGAATTTTTTTTGCAATTTATAAAACTGAGAATTTTGAATTTTTTTTTAAAGAAAA
TATAAAATGTTTGTGAATTCAAAAAATGCTCAGGTTTTTTGTAAAAATATTCGCATATTG
AGAAAAATGTTCATAATTTTGAGAAAAATGTTGGTGAAAACAATAAAAGTCCATCATTTT
CAAAAAAAAAGTGTACTATTTTTTGAGTGCGATTGAAAAAAATGTTTGCTAATTCAAAAA
ATGTTCATTCATTTTAAGAAATGTCCTAAATTTTTTAAGACATAATATGATCAGCACCAT
TGGAGATTTAATTGTTTTTCTCCCGTTGCAACGCACGGGCCCTTTTGCTAGTAGTTACTT
ATTTCCTTGTGGATATAACGTTTTTTCTGCTCGCTAATAAATTATTTCCAAATTTGAGAG
AATTTATAATTACTAACTACTCCCTTCGTTTGTAAATATAAGTCTTTTTACAGATTTCAT
TAGAGTACTACATACTTAGTGATCTAAACGCTTTTATGTTAGTTTACAAAGGGAGTACGG
AGCAAATGAGTGAATATGTACTTTAAAATATGCCAATTTCTTAGCGAAATAGAGATTTAT
ATTTAGGAACGGAGAAAGTAGTTGCACGGAGTACATATTGAGTAGTTAAGAAAGTGATGA
TCTTTATCTTTTGTGTCGGGTAGAGCAGTAGACGAACTGCAACAGGTTGAGCGCGCTGAG
AGCAGCCATGAACCAATAGAAGTAGTTGAGGTGGCCTTGGTCGAGGTCGTCCGGGATCCA
CCCCGTGGCCGACGCGACGGCGCCGAGCAGGGCGGAGTTGAGGTAGCTGCCACCAGCGAT
GGCGAGCTGTGCAAGCGCGGCGCCCAGGCTCTTCATGGACCCTGGGGACTGGTCGTAGAA
GAACTCGAGCATGCCGATGCTGGCGAACACCTCGGCCGCGCCCAGCACGAAGTAGCACGG
CGCCTGCCACATGATGCTCATCGAGGTCGCGGACGCCAATCGCCTTGCCTCGACCAACGC
GGCGTACGCCATGGCGGCCGTGGACAGTGCGAGGCCGGCGCCGATGCGCTGCAGCTGCGT
GAATCCCCTGTCCTCGCCGGTGATGCGCCGTGAGAGCGGCACCAGCACGGCATCGTAGAG
CGGAACGCACACGAGGACGCTGACGATGTCAAAGGTGGAGAGCGACGCCGGCGGCACGAC
AAAGGCGCCGACGCGGTTGTCCATGGCCATGCCCTGCTCGATCATCGTCGACGACATCTG
CGCGGTGACCGCGAAGAAGACGGGCATCGACGCCCAGACGGGGGACATGCGCAGCAGCAT
CTTCAGCTCCTCCACCTGCGACACCGTGCAGAGCCTCCACGGGCCCTTCTTCTCCGGCGA
CGGGAGCACGATCGCAGCCTTGTCAAAGAACCTGAATTGACTGGTGTGCTGCTCAGCCCG
GCCATGTTCGTGCAGGGCCGACGTATCATCGGGCAGCTCGAGACGGCAGTTCCTCGCGGC
CGCGACAAGCACTTGGGAGACCCGCGTCAGCGGACTACTTCCCGCTCCCAGTGGCTTGTA
CCTGTATATCTTCCGGCCGGCGACGAATATGGCGAGGCCGAACCCGATGAGCACCGTCGG
GATCGCGAGCCCGAGGGTCCACCCGATGTTGTCCTGCACCCACACAAGCAGCGTCGCCGA
CAGCAGCGAGCCAATGTTGATCGAGAAGTAGTACCAGTTGAAGAAGGAGGCCTTGGCCAG
CCGCTCCGTCGGGTCGGCGCCGTCGAACTGGTCGGCCCCGAGGGCCGCGCTGCAGGGCTT
GATGCCGCCGGTGCCGAGGGCGACGAGGTAGAGCCCCAGGTACACTGCGGCACGGTGGAA
ACCACTGCCCTCGTCGGACGAACGTGGCAGGAGCAACGGAAGCGCCGTTGATGATGCCAT
GATGAGCATCCCCTGGCACAAGAGAGTTTTCAGATATGCTCAAGAGTCAAGATTACCAAT
GAAAAGTTCAGAATAAATTTGGAGAAAACTCATAGATGTTGCATTTTTAAAACCGATTGA
ATGGCTGGCACACTTACGAATGTGTAAACGGAGAGGAAGACTAGAATTGTCAAATATCTT
CCCCAATAAGAGTCGGCCAAGAAGGCTCCGATGATCGGCGTGAGGAAGCAGCTGCCGACC
CAGGCGGACACATTCCTCGCGGCGCCGACGTTGCTCTCGTGGAGCACCGTCGTAAGGTAG
GTGATCAAGTTCTTCGAGACGGCGAAGAAGCACACGCATTCGCTGAATTCGGCACCTGAT
TTACGTCCAAGCCTTGACACATGTTACCTCCTTCCGCCGGGAAAACTTGCAGCGAATGTT
TTCAGTGAAGTTGTGTGCAGTAGAGTACCTAGAATGAAGAAGCATGCTCTCCAGTTGCCG
GTGCTCTGCTTGAGAGCAGGCTGTGCGTTGATATCAACTGTTCCATCACCGGTGTATCTT
GAGCATTCTTCCTGAACGATAATGCAGGAATATGCTATATGTCTAATTTATCTACCAATT
AGACAGAAGGCACGCATGATGGCTCAGCAGAGGAATATCTATCACCTGTGGCTGTGGAGG
CCGGCAAAGATGGTTCAGCAGTGGCCTCTCCTCATCTGCTGCTTCCATGACCATCTGACT
CTCTCGATGTAGTCTTCAGCAATATATTTGTGAAGAATTTGTGTAGTTGTTGAGAAAGAA
TGATATGAAAGAAAAAACTCGATCAGGAATTCAGGATAAGCAAACAGAAAGAAAAAAACT
GTTGTAATTTTCTGTACGTTTGTTCTAACTGCAGCAAATCCAGCAACAGCACATGAGTTT
TTCAAAACAAATTAACACACAGAGAGAGAGCGAGAGAGAGAGACCTGAGTGAAATGTGGA
TGGAGCCCTGTTCTTCCCTCTCATCAAGGAGGAAGACGAATGTACCTTGAAGCTATAAAC
ACCAGCGAGAAACTGATTATCTCTGAGCTAACCTAGCCTACATCCTGCGGATGAGACGAG
GAAATAATTGGATGAGAACCGTTGGAAAATGACAGGTCAATACGGATACGGTAGAGTGGG
TGGTGATTAATTACTGACTTGTGATGAGTGATGGCATTTTGGTTCACCCATCGTACAGTA
CCATACTGACCCGTTGCTTTCTCACTAATCTCTCACAAGTCACTACTCCTGTACCGTGGT
ACTGACCCGTCACTTTCCAACAGTTCTCATGAAAATATTATATCACTTGCCCTGAAGACA
CCGAAAACAAAACAAAAGTTCTGCTGGACGAGTACCTGCTTTCCATCTTCTCGCTCTGCG
CCGAGATGTGTTATGTGTTTCTCGCTCTGCACCGAGATGTGTCATGTGTGATGAGAGTGG
AACGGACGAAACCGACTCTTGCATGAAACTTTTAAAAAATAGCCTAAATCTGAAAATATT
TCACAAACTAACCCTTTTGCATGATGTGCGGGGCTAAGAGCATCTCCACCCGTGCCCCCA
AGAGCCCCCCTCCAGGGTTTTTTTTTCCGCGTGGGAAAAAAACGGCCCAGTCACGCCCGA
GGAGCCTTTTTTCGCCGGCTAGGCCCGAAATAGGCCCCGGCGTCCCAGGCCAAACACAGC
GCGCTAGGGGGCGCCGGCGTAAGAAAAAACGGCGCGTCGCCCCTCTGTCAGGTGAAAAAA
CGGTTCTTCCTCCTTCAGATTTAGCCCCTCGCGCACTACACCTTTCACCGTTGTGTCGAT
CCCGGCGCCGTCCACCTATCCACCGCCGCTACAAAGGTCATCTTCCGGTCGACGAAGGGA
GGGTACGCCGCGGCTTCACCCCCTCCTGCCCCTGCTTCTTGGCGGGTTTTCCCGACGCTC
CGGCCACACACGCGGCTGCCGTCCGCCACGCCCGCCATCGGAAATTTTCCTAGGCGATGG
ACTCCGACGACGAGGAGGCGTTCACGGCGTTAATGGAGGAGGAAGCCGATGATACGTCCA
ATTTGCATCAT