Contig Data
morexGenes
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Map Locations of contig_132862 (3750 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_132862

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3714 1 1863 bp MLOC_3714.1 Available Available LOC_Os12g40419.3, FRAME:-1, EVALUE:1e-92, 13112.m04199 protein protein kinase domain containing protein, expressed





CDS Structure of MLOC_3714






Contig Sequence (3750 bp)

>contig_132862 3750 assembly3_WGSMorex_rbca.fasta
CAGTTACGAGAAGCACCTAATTAACGGAGGAAAGAGACAACTCAACGCCTGACTCGTCCC
TACTAGATCGGACAGATATCATGGTTTTAATCCTACGGTCAAGGTCTAGTCCGATAGAAT
ACAACATATCAGTAGTCTGATGGCTAATGTTTCCCAACAACAAATGGACGATTCACGACC
GTTCTGACGAATGGCTTCTTTCAGACTAGTGCTAGCAAGTGTTTTCCTTAGAAAAAACCC
ATAACATAACCTCTATTACAAGTATCTACTCTCATTAACGGACTTTGTTAAATCAGTGTG
ATCCCGGCGCTGCCGTTGTGCCGTGCGATTCGATTCGCGCCCATCCAATCCAGGCCGGCC
GGCCAGGTTTCCTCCTCCTCGGCGACTCCGCCGCGCGCCGGCGCACAACTCCAGCCCCCG
CGGACTCAGTTCCGCTCCAGCCAGACCCAAGAGCATGGTTCCTGCCGCCATGGCGGTCTC
CGTCCCCTTCTGCCACGCCGTCCTGCCCTTCCCGGCCGCCGCCAGGGCCCCCTTGGCGCG
CTCCCGAGGTGGGAGGCTGGGCCTCGCTTCGTGCTGCGGCGCCGGTCCTATCTCCGCCAA
CGCGGTGACCTGCGCGGCCCCAGTCGCCGGTGCCGCCCGCGTCGGCAGGAGGAGGTACTC
TCGACCCGCTAATATTAATCGCTATGGTTAGTCTTACTCAAAGGCCGTGCCAACAATTCC
AAACAGTCTCAGCTAAGAAGAGATGCGCAGTTAACTAGTACTAAAGCATGCGCCTGCATT
TGATTTGTTTAGCTCCGAATAATTTGTGTAAATGGTAGTTTTGCCGTCTGGATTACCACC
GGAGCTGAAGCCGTGAGCACTGCTGCAACATGTCAGCCTTCTACTGCTTGCTTGTGTGGT
GTTTCATCGTGGCCAATGACACTCTTTGCATTCAACAGGTGCGAGCTCTTTGATCTCCAT
CGGCAGGTAGTTCCTTATGTTGATTCGTGGGGTTGGCAGAAGTCCATTGTTGAGAGGAGG
AAAGCGTTGGTAGGCATAGACACTGACACAGATGAAGATCACTCGGACACCTTGATCGCG
CTGCAACATCCACCGGTTTATACGTTGGGCAACGGCAACGATGAGAAGTACCTCAATTTC
AATTTAGAAGATTCTCCTATTGAGATTCATCGTATCGATCGTGCTGGGCAGGTGACATAT
CATGGTCCTGGACAGGTATTTGCTACTTATATTAACTGTATTGTGGGTCTGAAAGTGTAG
TCTATTGTTTCCAGTTTAGTTTTCTGCTTGAAGGTAGTTAAATCTGAATGAAGTAACCTA
AGCTTCAAAGGTAAGTAAATAGAGAACAAATAAGGTTTTCCATAACCTTTTTGGTTTGAT
CAACCTATGAACATTTTGAAATAAGAACAAAATTGCTGACTTTCGAAATATTGAACACAA
AATCTCAGTTATTCATGTTTCTTTTTGTAGCTCAACACTATATTTTCTTACAGTCAATTA
TTTTGCTTGCTTAGCTTGTTCTGTACCCGGTTCTCAATTTGCGGCATCAGAAGAAGGATC
TTGTCTGGTACCAAAGGTCAATTGAAGGTGTGATCATTCGCGCTCTTCAGTCTGCATTCT
CTATCAAGGCAGCAAGAATAGACGGCCTCACCGGTGTCTGGGTTGGTATGTTACTACTAT
CCTTTTGGATACTGCAAAGTGTTTGATCATGTTATCATGTACTCCCTCTGTAAACTAATA
TAAGACCGTTTAGATAGTATCTTTCTTAACTCGTACACTCTATTTCCATTCCAGGTGACC
AGAAAGTTGCAGCTATTGGAATTATGTGCGCAAGATGGATAGTATATCATGGTCTAGCGC
TAAATGTCACAACTGACCTAACCCCTTTCGAGCACATTGTTCCCTGTGGCATAAAGGGAC
GTAGCGTTGGGAGCATAAAGCAGATCTTACAAAAGGCTTCCAGCGGTAGAGAACTTAACG
ACGCAGAATTAATGGATATAGCTTATGAATCATTGATCAAAGAGTTTGCTGAGTTTTTCC
AGCTCTCTCTGGAACCCAGCCCTGATTTGCTTCTTTAGCTGGATAACATCATCAATCAAC
TGAAGATTTTTTTTTTATTAGATCATCGAAACTGACTTCTGCGAAGAAGTCAAAAACAAA
TACAGAGCAGATAGCAGAGGCAAGTTTTTATTCAAAAGTGCAGCCTCCTTCAGTCCAGTG
GTTGCAAAACTAGTGATCCGTGTGCAAGAACTCAAGCCTTTGATTCACCTGCAAGTCCAG
CCATGGGAACCAACCATTCTCAGTAAATCTGTCTTGCGATTCTGGCCAGATGAAAAGAAT
TCAAGCAAACGCACGTCACCTTCTTTGGTGTTGGAAGTCGACCCTTCGGTGTCGACACCC
GGCCACGCCTTGCAGGTGCAGTGCTTTCCTTTCTCGATGTCTTCATAGACGGAGGCGACA
TGCTTGCCGCACCCCTTCCAGGTGATCTTGCCGCATTTTTCGCACTCCACCTTGTAGCAC
ATCCTGTGTTCTTCTTCTTCGGATGATCACCTAGCCCCCTGTTGGGAACTGTGGTATGCT
GCTCTGGACTGGACTAGCTGGGTGTGTGTGCCTCCTTGGCTCTCCATGGATTCAGCATTT
ATAGGAACAACCAAGTGCGGATAAGCTCTATGTGGCCCAGTGCGGTTGGTGGAGGAAACG
AAGTCCGGATAAGTTGTGCGATTCTGTAGCTTGTAAAACTGTTGGGTATTCCCAATGCTG
CGGCGAATATCATTCACTTTGTAAAACTGTTAGGTGTTTCCAATGCTGTGGCGAATCTGA
TCCGGATGGGAACAACTCTGTGCTCCTTGTGCTGACCTTGTTGCAATGATCAAACCAAAG
TTTGTGCTCTTGTGGCGATCTTGTCGCATTGGCCAAACCTAAGTTGCTGATTTCTATGGT
GCTGTTTCCCATTCAAACATGTGAGTTGTTCTTGTGCTCGTAGTAGTGATACATGTGCAG
CTGTACAGGTACTAGTACTACAACGATCATCATCATGGAAAACTTCACCCCCAAAAAATT
GTTTAAGTTACATTTTTCATCTACTTTGTGTGCACGTGGGATGTAACTTGGCTACGCAAA
GCGTGGCATGGAGCCGTTGGTCGACGGCGAGCTCCGGTCGCTGACCCAGACGTCCTGCAC
CGATACCGGCGACCGGGCTTTCCTTGCCGCGGCGTCCGGTCCATCGAGGCCCGCGTCGGC
GATGCCGGAGTCTGGGGCGGCGTCCCTGATCCGGCACAGCTCGGCGGCCACCTCGCTCAT
GGACGGCCGGACGTCCTTGTCGAACGCCAGGCACCGGAATGCGAGCTCGCTGACGTGCCG
GACCGACTCCATGACCCAGTCCTCGCCGTGGCGGAGGAGCGCCGGGTCGACGATCTCGTG
GACCCTCCCCTTGCCGATCCGGTCGAGCGCGAGGCACGCCAGGTTGACCTCGTTGGCCGG
CCGGCCGAAGTCGACGACCTTCATGGCGGTGATGAGCTCGAGCAGCACGACGCCGAAGCT
GTACACGTCGCTCTTGTCGGAGAGGTGGAAGCTGTGGTGGTACTCCGGGTCGACGTACCC
CGGCGTGCCCTGCGGCGCGGTGGAAACGTGCGAGCGCGAGGCGTCCTCGGCGCCCCGGGC
GGCGCGGGAGAGGCCGAAGTCGGCGAGCTTGGCACGGAGGTCGGCGCCGAGGAGGATGTT
GCCCGACTTGACGTCGCGGTGGAAGATGGG