Contig Data
morexGenes
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Map Locations of contig_132754 (4528 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_132754

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3698 2 2012 bp MLOC_3698.1 Available Available None
MLOC_3713 5 2867 bp MLOC_3713.3 Available Available LOC_Os12g40450.1, FRAME:+2, EVALUE:9e-106, 13112.m04203 protein biotin--protein ligase, putative, expressed





CDS Structure of MLOC_3698






CDS Structure of MLOC_3713






Contig Sequence (4528 bp)

>contig_132754 4528 assembly3_WGSMorex_rbca.fasta
TCCGCCGCCCAAGATCGAGGCCGCCCGGCGAAAGGGCATCTGCCACCGCGGCGCCGCCTG
TCGGGACCAACCATCACCGCACCGGCCTCTTGATCTCAGGTGGGTTTGGTGGTCGTGATG
GCCATCAAGGAGTACGAGGATTGATGGAGGAGTCGTCGACGCGGATCGAAGGTAGGCCGC
CTATGCATCCCGCGCAATCACCACCTCGGCAACGAACTGCAGATGCGAGACTACTTTGCC
CAGCGACCAACCTATCCTGCCAATCTCTTCCTGCGAAGGTACCGAATGCGTCGATCCTTC
TTTGTCAAAATAGTAGAGGCTTGCGAGTCAAATTCTCGCTATTTTACTCGCCGGAGGAAC
GCCATTGGATTATTGAGATTTAGTGCATACCAAAAGATATCTGCAGCCATGAGGGTTATT
GCATACGGAATCGCTGCGGACTATGCCGATGAGTATCTTCGTATTGGTGAAGATACTACA
ATAGAGTCCGTGCGTAGGTTCACGAAGGTTATGATCCGCGTATTTGGTCCAACTTATCTT
CGAGCACCAAACAAAGGTGATACGAAGAGATTGATGACGATGAATGAAAGGAGAGGTTGG
CCGGGTATGCTAGGTAGCATAGATTGCATGCATTGGACTTGAAAAAACTGCCCGAAGGCT
TGGCATGGGCAATATTGTGGCAAAAGCCGAGATGCAACAATTGTTCTTGAGGCCGTAGCG
TCCGAGGATTTGTGGATATGGCATTGCCACTTCGGTTTACCGGGCACCGACAATGATATC
AATGTGTTACAACGATCACGCCTATTTGGAAGGCTTGCTAGTGGTGATGCTCCTGCTTGC
AACTTCACTGTGAATGATAATGCCTACACTCAAGGGTACTACCTTGCCGACGGCATTTAT
CCTCCTTGGACTACTTTCGTGAATACTATATCCAATTCAAGCATTAGGAAACAAGCTGAA
TTTGCTAAGCAACAAGAGGCGTGCAGAAAGGATATTGCGAGAGCCTTTGGGATTTTGCAA
TCTAAATTTGCTATTGTCCGTGGGCCAGCTCGTTTTTGGGATAAGAAAACCCTCAGCAAC
ATCACGACATGTTGTGTGATTCTTCACAACATGATCATTGAAGATGAGATGGATTTAAAC
CTGGAGTTCTTCTACGACAATGTTGGTAGCCGTGTGAAGCCATCTAGAAACCCTGACCGT
ATTCAGGCTTTTCTGGAGTCCTACCGGCATATAAAGGACGCCCATGGGCACACCCAGCTG
CAACATGATCTCATTGAACACATATGGCAGTTGGATGGGCAGTAGAGATTTTTATGTTCG
TCTATTTGATTGTTGTGTAATTTGAACTATTCTTTTATTTCGGACAATTGTTGTATTGGA
TTATTTGTTTAATTCTTCATTTGAACCATTCTTATAAGTTTGACTATTGTTGTAATGTAC
AATAAACATATATTTATATTTTAGTTAATGTTTGCATAAGAATTTGCTGGAGATTTTAAT
ATCAAAACCTACGTATGCAGGTCCGGTTTTGGCTGCGGCAGAATAGACACCACAATGCGG
AACTGCAAAACAGAAGTCAAAAATGAAACTGCAAAGCGCTTTGCCGCGACCTTCATCCTA
GGTTTGCGGGCTGGCGAAATGCGAGATCTACTAGAGATGCTCTGAGATTATCCGCACTTC
GAAAGTTCCGGATCGCAAAAGAACAAAAGGGCGCCGTTGTGGACAAAATATATGCTGGCA
GAGTGGCAGGGGCATAAAATATGATGCACTCAAGCATCCGAACAGGTTTTACAAACCGAT
AATAAAGATACACAGGTTTTACAAACCGATAATACTACCCTACAGGGAGAAGGCAAATTA
AACATACAAGAGTACACTGATCATTAACCGACACACAGGTTACAAACCAACAACACTACT
TGAACCTCCAGGGTTCATGCGACAGAGCAACCACGCACATGGAAACGTCTCATGTTGCCT
CCTGTTAGCAGAAGAACAAGGCACATGAAATTTGGTTAGATGTTGCGTCAAGAGTTTAAA
GTGTCTTTAAAAAAACTAGCACATTTCGTTGGCAGAAACTCAATTTGTTTGGTTTGGTTC
TACATATCGATATATTAGTAAACACTCTAAGGAATGACAAGTTTGTGTCTATTACCTTCT
ATAACAAAATAATAGTAATCGGGTAGTGGAATAAGAATGTAGTTTTGGGGAGCATAAGAA
TAAAAAAAACATGTAAAAAGGTAAAAGGTCTGACGTTGTGAATGGTTCATGACGAAGAAC
AAATAGTGTACAAACCCAATGGTATGTCATAAAGGTGGTAATTTTCTTATTTGCATCTGT
ACCGCGGCAAAGCTTATATATTTTGTTCCATTAAGACAAGGACTTTGAGTAAAATTACTC
CTCAAATACTTCATTTATGTGATATAAAATTATAATGACAAGTGAACCCTTTCTAGTCCT
ATATTTTGTTGTGTACCAAAATTGAGACTTGTCCTAACGAAAAGAAATAAACGTTGTAAT
TTCACACTTAGGAACAGTATGTAGCTTATGTAGCTCAACGAATTCTGGGGAAGAATGTGG
CGTGTATTACCTGCTAGCTGCTTGATACGTGATGCCTAATTAGCATGCCATCGTAGAATC
TCATCAATTCCGCTATTCTAAAAAACAAAAACGACTTTGGTTGTCATGGCCTGGAGTTGA
GATCAAAAGCTAGAATATACCTTGACAAGCTAATACAATATATTCATTATTAACACTTAC
GCCTGGGTTAGGATGCCGCTTCCGTAATGTGTCGAGTACAGTCACAACAGAAACGGCCTT
TTTGACTACTTCAAGGGACTCCTTGTGCACCCCAACAACCTTATTTCTCTTGAGCACAGG
ACCTCCTGATGTGCCATGCTCGGATGCATAATTACAAGTTATTTTACCATCTTCCGGCGC
TGCATGAAATCAGTAGCAGCAAATAATGAAGTAGTTAGCTCGAGTCACTACAATATGCAT
TATATATCATTTTCGTTGAGAGAGGCATTACGTACGTGATGCAGCCATCGAACACTCCTG
GGTACAGAAGGCGTCCAGGTGAAGTAGCATGGAATGCTATCATCTCAACATTTCCACTAT
TTAGCGCAGTAGTGTTTGGGTCTGCGAACTGCAGTGCGGCGCATCTACTGCAGTCTCCAT
CAGGAGCAAATCTAAGTAAAGCAAGGTCTGCATCTTTGTCTGTCCAACGTACTCCAGCTG
AATACCATTTTGTTTTGCCAGGGAATGTGACTTGGATACTCTTATACGACCCAACAACAT
GCTCGCATGTCATGACTAGAAATGCTGGTTGACTGGTGAACATAACAAAACCACTACCCT
CAAATTTAGAATTGTACCCCAAGCTGACCACAGAGTCCATCTCTGTACACAAGGTAGAAA
CAAATATTCACGATGGATAGAAGAAGAAAAGAGTCTATGAACGATGTAAAGAAAAGGTAA
AGAAAAGGTATAAACCGACAAACAGAAGCCAAAAGGAAAAGATAAACAGCAGCAACAGCA
AGGAAAATGGCTTTATCTACAAAGTCAGGCTCATGCCTTTTCTCTAAAAAAACAGCAAGG
AAAAGAGGACTGACCCATGCTGAGAGAGCTCCGGCGTGGAAGACAGCAGCAAGAACAACA
GCAGAAAGGAAGCAAGGAAGATAGCCAGGAAGAGACGAGGGCGTGGTTTCCTCCGGCGGT
GTTTGAGTTGAGAGAGCTCCGGGTAAGCGCCGGGAAAGAGTTGAGAGCTGCGAGGAAAAC
CAAGCCACTTGCCTCCATTTATACTGCAAGTGCAATGTACTCGCGTCTAGCTTTTTGGTA
ACGTCCAACCGATGCGTGTAAATTTTCTCGGGTACTGTAGGCAGTCTGGTACTGTGGCGT
CTAGCCTTTTGGTCACGTTCTGGTGTGGCGTGTAAATTTTCGTCGCAGGACCAAGATAGT
GAACTAGTGCTGCAGGAGGTAGTGCGCTCTTCTGATCAGAGCCAGCCTAGGCTTGTAAAT
TTACTCGCGTCTAGGCTTTTGGTCACGTACAACTCGGGTACTGTAGGCAGTCGGGTACTG
TGGCGTCTAGCCTTTTGGTCACGTTCTACTGTGGCGTCTAGCCTTTTGGTCACGTTCTAC
CGTGGCGTGTAAATTTTCCAGGGACCAAGGTAGCACCGCAGAAGGTAGTGCGCTCTCTCA
GAGCAAGGAAATTTATCATTGCCGTGTTACTGGAAAGCCTTTTCTTTTTCTTTGACGAAA
AAAAAGCACATTGCTGATTTTCATTAATAAGAAGGCATTACAATGACAGATTCTGCCAAG
ATGCTCACCCAAAAATATGGTGAAGATCAAACGACGATCTCTAACATCTGTCAGTTATTA
GCAGCTAGCAGCATAGACAAGCTGAGCCGTGGTCTCCTCCTCCCGTAACCCTAGCCGCCG
CCTTCATCCACTGAGCCGCCGCCTCCTCCCGTAACCCTATCCGCCGCCTCCCGTCACCCC
CCGTAACCCCCTCCGGTCGCCCCCTCCC