Contig Data
morexGenes
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Map Locations of contig_132477 (6159 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_132477

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3661 1 729 bp MLOC_3661.1 Available Available LOC_Os03g63420.1, FRAME:-3, EVALUE:1e-62, 13103.m07030 protein OsGrx_S14 - glutaredoxin subgroup II, expressed
MLOC_3660 1 225 bp None Available Available None





CDS Structure of MLOC_3661






CDS Structure of MLOC_3660






Contig Sequence (6159 bp)

>contig_132477 6159 assembly3_WGSMorex_rbca.fasta
TCTGTCAGCAAGCCAAGCCCGACCGAACAGCATCACCAGGTTTGCTGCTGCCACTACCCA
TTCCAGACCGGCCATGGGAGATGATTTCGATGGACTTCGTCGACGACTTGCCGCGGTCCA
GTAAGTTTAACTGTTTGCTTGTGGTGGTGGACAAACGAACCAAATTCGCCTACTTCTTGC
CGCTGGCTCATCCATACACAACAGCATCGGTAGCTCAGCTTTACTTGCATCAAATCTACA
AGGTTCATGGTCTGCCAGGAGCTATAGTTTCGGACAGGGATCCCGTGTTCACCAGTCACT
TTTGGCAGGAGCTTTTCCGCGGTGCAAGCACAGAACTCAGGCTGAGCACAGCACAGCACC
CACAGACGGATGGCCAAACTGAACGCGTCAATCAGTGCGTAGAAACCTTTCTTTGTTGTT
TTACCCAGGCCTGTCCTCGGCGTTGGAGATTTTGGATTCCTCTGGCTCAATTCCGGTACA
ACAACTCCCACCACTGTGCCATTGGGACGACTCCATTCAAGGCCATGTTCGGCTATGAAC
CGCGCCACTCGGGACTCTCATCAACTACGGTCTGCTCAGTCCCTGCACTATAGTCATGGA
TTGACGAGCGGGCTCTGGTGCAAGATCTCCTGCAACAACACCTCAACCGGGCCCGTCAAA
TTATGAAGGAGCAAGCAGACAAGAAACGCTCATTTCGAACCTTCTCTGTGGGTGAGCATA
TCTACCTCAAGCTACAACCATATATCGAAACATCTGTTGCTCCTCGGGCGAATTACAAGC
TTGCCTTCAAGTACTACGGGTCGTTCCAGATTGTCGCCAAAATCAATGAAGTTGCCTTCA
AACTTCAACTGCCTCCACAAGCTACGGTGCATCCGGTGTTCCATGTGTCGCTGCTCCGTC
GCGCTCTTCTCCCGGGTACGACAGTTGAAACTCACCTGCCTCATTCATCTGATGATTTGG
TTGTTCCCATAGCAATCCTGCAAACCCGATAGCGCAAGCACAAGGACGGCGTGCGCAAAT
AAGTGAAGATTCAGTGGTCCGCTTCTTCAGCGATGGGGCAAACATGGGAAGACAAAGCAA
ATCTGCTGGCGCGTTTTTCGCACGCCGAGGCTTGGGGACAAGCCTCAGCTCAAGAAGAGG
GGGATGTCAGCAACCCTAACATGGGGGATCCGCATCCCCAACAGGCTCCCACAACTGCTA
GGCCCGCACGGTCCAGGCAACCCAACTCCCGCTACATCAGCCCAGCCTAGTCCAAGTGAA
GGCCATCTACTTATTCCTGCGAGAGGGACGGGGCAAGGCATCCGGTGGATCAGGGCAACG
ACAACGACGGCGGCTACCTCATGTTCTTCTTCCTCTCCCACTCCCCTCCTCTTCTTCCTC
TCCCACTCCCCTCCACCAAATTCGTGTATCTCCATGTAATAGCTACCTAAGACTAGAATT
CGTGTGATATCTTAATAGATCTGAGGAAATCCACCTCCAGTATCCTATCATATTGGTGCC
AGACAATCATGTCAGCACAATAACTCATAATTATGTAACGTTGACTAACTTATGTCACAT
GAAAACATGCTATTTGGACTTTCTGTTGACAGAAGACACGAGGTATGAGAGAGAAACACA
CATCTTTCAATCAACGGTATAAAGAAAATACTGAGAATGCTCACGCCCCTGGTGAAAAAT
AGATTATGCATCACATCTTTATTCCCTCCTAGTTTAAACAGTGTGCCAACACCCACTTTT
GCGGATAAAAGCACTGAGGAAGATTATCAAAAACCCTCCACAGGCTTGCCCTCCATGTCA
AAGGAAACCATCATGCAAGCGATTGATACTAGGTATACGATAGACCACACATTGCACAAA
ATTTACCATAGCCAAAGTGCATTGTACATTTGTAACTCGCTGCTTCATATTTTTGAATCA
TCTACAACTTAGCGACTGCATCTCCAGTTCTCTGCCATGGGCTCAAAGAGTGCGTGCGTA
CGGCAACAAGGGCTAGAGCATATATAATGGTTTACTGTATGATGTCCCCCGTCATTTGCG
CTAAGAGCACATTGCTTTCTCCAGCGTCTCCTGCAGTTCCCCACTCTTGTATGCCTCTGC
AAAACATACAACAACCCAAGCGTTAAAATCCCGGTTCATTCAAGCACTGCTATCAAATAC
AAACGAGTATACAAGGAACATCAACACTAATCATTGGTATAATAGAAAAGCAGTGATACT
AATCCTTCTCGATAAAACCTAATTTGGATACAAAAAGATATCGCATTTTCATCAACAAAG
CTGCTGATTTTATTTTTTACGCCGCAATGTTGTACATTTGCCATTGGTACTCGATGAAAC
TAAAAAAAATCCTGGAATTGGTCTAATAAAGCTTCCAGTTCATGAGTCAACAACACATAA
TCTGCTGCTCCTTGACTAGAATGGTGTGGCAGCAATTTAAGCTAAGTGATTGGAATTTTG
CACCAGTCCTGGAAATCGGTGTTCCCACTTCCCAGAGCCTGGCATTATTCCATGTCATGA
CACTGAAGCATAAATAATAACAATAGATTTGAGCTCTAAGCTGTACTAGGAAGTGTCCGG
CCAGAATAATACTAGAACTTGGAACAGGAGCAGAACAAGTGAGATCCGCTCATGCTGCAA
TGTTGGCAACAGCAAAAAGAAGGTTACCAACTTACATTATGATGCTCCTTCCTGATAATG
TTGCCATCACAGATGGGATAAACACATAGCACAGAGGGAATATTCCAGCAAAAAAAGAAG
AAATATTCCCATCTTAAGAGTTCAGATTTCGGGATTGCTATTTCAACTGCTACTAGTACT
TCGGAGTTTAGACTTCAGAGCATGGAAAGAAACACTATGAATGATTGAAGTCGCTAGACA
TAATTATGATTACAGGTAGGCATATTTGGTCGGGGGATTTGGAGCAAGCCACATCACCAG
ATGTGATCCCTACTGTCTGACAACCATCACAAGACTTTTAACACTCCCAACAATCCCAGC
ACATCCAGGGATGAAATGAACTTACTAGGCGGTTTCGGCCTAGAAAATAAATAAAAAATC
TATCCAAGGTGCTGCAAATAGTGGGGATGAAACTATTGGTGATGGTAATGATGGTGAGCA
GGTGGGGGAGCAAGCATCTTTTGTTACTCATGATAAAGATGGATTTTTTGTCATCAAGTT
AAATTGTAGAAAATGAACTCTGAACCCATCCTGGAAAACTTGTGGAAGCTACAAAACAGC
TTCTTAGTTTACAACAAAGCTGTTGATCAGAACTCAGCTAGTCTATCGATGTACCATGAT
AATTTCTGATCCAAAAAATTGGCAGGGAGCCATGGCATTCTCAATCTTTTTTCTCTCTAA
AGCTGACTATAAACTCTACTAAGCAAGTGCCACATCACCATACGTGTCCCCTACTCTCCA
AAGTCCCAGCAGTTTGGCTAAGTTAGAGAATGGAACACTGAGGCAGACTACTGAAGAAAC
CAGTCCATAGACCAAGTGCGAAACTGATCTTTCTTGATAATCATAATTTCGATGCAAGAA
ATCTCACATTTTCATCAATATTGAATTCAGACGTTCTAGCTTATATAAAGGTAGAGATCC
GCAGGCTGATCTTTTTGAAGCTTGAATGCCATACATTCCTAGCATGGAATGGTCTAATAA
AGCTTGAATCCGTCAATCAGCAGTGCGTATTCTGTTACTTGATTGGAATGGCTTGCCACA
AATTTAAGCTACGTGGCTGGAATTTTGCACCAGTCCTGAAAATTGGTGTTCCCAGAGGCT
GGTACCATTCCATGTATTTGACACTGAAGCATAAATCAAAATAATAGTTGAGTTTTAATG
TATACTACTGTAGGAAGTATCCGGCCATGAATGCTAATCAAGCTTGAAACAGGAGGAGAA
CAAATGAATCCTCTCCTGCTGCAATGTTGGCCGGTTTGATGTTGGCAGCCGCGAAAAGAA
GGTTACCAACTTACATTATGATGGTCCTTCCTGATAATGTTGCCGTCACAGGTAGATAAA
TGCATAGCAGAGGGAATCTTACAGCAAAAAATACAGCAATATTCTAATCTTGAGAGTTGA
GATTTCAGGTTCACTATTTCAAGTGCTACCACATTGGAGTTTAGAGCATATAAAGCAACA
CTTGGAACGATCAAAATTACAACCACGTGGCAAATGTGCTTAGCAATCTTCAAATCATTC
AAATGGTAAAAAAAGTCACAAGAAACAGTTATGATTATAGGAATCATATTTGTTCAGGGG
ATTTGGAGCTAAGCTACATCCCCAGGTGTTCTCCCTATTGTCTGAAAGTATCACCAGAAT
TCGACACTCCCAATAGTCCAGAACATCCTGGGATGAAATGAACTTATTATGCAAGGTTTC
GGCATAGGTACTAAAACTTTATACCTATCCAAGGTGGTTCAAATAATGGGGGTGCAACTA
TTTTGGTGATGGTAATGATGGTGAGCAGGTGTGGGAGCATGCCTTTGATTCAAATCAGCA
ACAGGAACATGAAGCATCTTTTGCTGCTCATATAGTAAAGATGGATTTTTTTTCTCCTCA
AGTTAAGTTATAGAAAAGGAACTCTAAACCACATCCTGAAAAACTTGTGGAAGGACCAAA
ACTGCTTCTTCCTTCACAACAAAGTGGCTGATCAGAATTCGCTAGTCTGATGTATCATGA
TAATTTCTGATCCCAGAGCCTGGCCCTTTCCAACATTGGCATGGCAACAAAAACTGTCTT
TTTCCCTCTAAAGCTGACTACAGGCTCTAAGTAAAGAACAATACCAGGTCCTACCACTTT
GGCTAAGTTCTTGAGCACGGAATCCCTGAGGCATTCTCACACACACAAGCACTGGAGCAG
ATATACTAAACTAGTCCATAGACCAGGTGTGACACACATTTTAACAAGCAAATAAACACA
TTTTTGTAATTGTTAAGTACTCACTATGCTACTTCCTCCGTAATGTCTATAACATGTTTG
AGACTTTTACCTTTCAGCTTTTACTAACAGTTCTCACTGGTTCTGTTGGCCTTTCAACTC
TGAGAGCCAATCCATCTTGGTGAGACGATATACTTTTAGGTTGTATATTCCATCGACCCT
GTTCTATCATATCATGCTCCCAACTTTTTCACATCAACACCTTACAAAATGTCTATTATA
GTTTCTCAAGCAACACTTTCCAGTTTTTACTCCAAAAAAAAAAAAAGCAAATAGGTTTCA
ACGGCAACGGAAAGCAGAAACTATTCCACACCAATGGAGTGCCTGACTGCAATCCAGTCC
TAGTTTATCCGATACAGCTAGTACATATTGACACTGCCCCAGACCCTTTAAGATACACGA
AGCGACAACTATGTATGTTGCCTTCAACATGGGCAAATTATACGACTGAAACAGCTACAC
ATACATGGAGTTTACACAGCAACAGAGCGCAGAATGCAATTCAATCCTAATTTATCTCTT
GAATGTGAAGAACTCAACTATCAAAACTTGACACTACCCCAAACCCTTTCAGATACAAGA
AGCAGCATGAATGTGCCATGCCTTCAACATGAGCAAATTATATGCCTGAAACAGCTACAC
AAATTATATGCCAAATCTACAAATATCGCCCTCAACTAAAAGTATATCGCTAACGAACGA
ATTGATATGCCCTTGTAGAATAAATTGTAGTCCGATATCACGAGTGTGCAGTAAAGCAGA
AATTCTCGAAATTTCAACTGTAATCGTGGGAGAGTAAAGGCAGAGAGCGCATATGAATGT
GCATACCGAGGGTGATGTCGCATCCGCCGAAGAACTCGCCGTCGATGTAGAGCTGCGGGA
AGGTGGGCCAGCTGGAGTACTCCTTGAGGCCCTGGCGGAGCGCGTCGTTGGCGAGCACGT
CGAGCGTCTCGAAGGGCACGTCGAGGGAGCGGAGGATCTGCACCACCGTGTGGGAGAAGC
CGCACTGCGGGAAGTCCTTGGTCCCCTTCATGAACAGCACCACCTTGTGCGCCGTCACCA
CCTTGTCCAGCGTCTCTTTCATGCCCGCCGCCACTCCGCCTCCTCCTCCCTCCGTCGCCG
CCAGGCGCCGGACCGACCGGAGCCGCAGGGCCGGGGGGGGGGGGGGTCGGGTAAATTCGG
ATAATGCATGCTATAAGAAGCTATTACAGCCGAGGACAG