morexGenes - Barley RNA-seq Database

Contig contig_132300
Source Contig contig_132300
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_132300 (9010 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location
Predicted Genes from contig_132300

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_3645	3	2022 bp	MLOC_3645.1	Available	Available	LOC_Os01g61200.1, FRAME:+2, EVALUE:2e-172, 13101.m06513 protein GDSL-like lipase/acylhydrolase, putative, expressed
MLOC_3646	2	3045 bp	MLOC_3646.1	Available	Available	LOC_Os01g61180.1, FRAME:-3, EVALUE:0.0, 13101.m06511 protein exo70 exocyst complex subunit domain containing protein, expressed
CDS Structure of MLOC_3645

CDS Structure of MLOC_3646

Contig Sequence (9010 bp)

>contig_132300 9010 assembly3_WGSMorex_rbca.fasta
AGAATAATCAATAAAATGGCCGCATGGATCTTTCAGATGCACAGGCCGGAGGTAATCCTC
CTTTTTCTAAAAAAAAAAAGAAGAGCTCCGGTCATTCCCGCCGAGCGAGCCCATGCCAGC
ACATAGCGCGCAAAAAATAGGATCTCCGATCATAGCCACCAAGCAAGCCCGTTGGCGCCT
GTACCAGCCAAAGCTAAGGTGTGCATTATAGAGAAATGGACGCATATGCTCATCCACTGG
GGATAATATCAGATGATACCATCACTTGTATGCTTCCAAAATACCAATTCAAAAAAACAA
ATTTAAATGTTTCAAAAGTTTCTTTTTTTTAATGTTCACAACGAGTATGTCTACAAACCC
TAAAAAATTTAGATCAAAATTCAAAGTTCACATAGAGAAACAAGAAAGACATATTCAATG
GGAGCAGCAATTCGATGCCCAAGCTCATCTACACCCGCGATAAAAAAAACTAGAAATATA
AAAAAAATCATGTTTTTGCATGATAAATAATTTGATGCCTGTGGTGCATTTCAAATTCCA
AATCATTTGAATATCTCAGTAGCTCTCGACAAAAAAAGAAAAATTTGGGATCTACAAAAT
GTTTATTGTTAATGTATTATTTGGACCCAATTTATCTATTTGGCTAAGAGCTACTCCTAT
GTCTAAATGAGCTATCATTTAGAGTACACGTCAAACACCAAATTATCTAACATGTAAAAA
AACAAAACTGGATTTTTTTTTAACATTGTTTTGATTTTTTTGGCCGGATGCAGACGAGTC
TGTGCTCAAAAATGAATATTTGAAATTCAGCATAACAGTGTCAATAAAACAAGTATGAAC
AGTGTCAATAAAACAAGTATGAACAGTGTCAAAACCTACCCTATTGACATCTGACTTTTT
GAATTGGTATCATGCGACTATACAAGTGATGGTTCACTCGTTGTTGCCGTGTCGCCATCA
TCACATATCAAAATTCCGGAAGGATTGTAAAGCTACAAGTTCCAACGGCCCGTGAACTTG
CGCTTTGTCCCCATGCATGCATGCATGACCAACCCATCTTCCCTGCCCAATCCATCGACA
CGGCACTCGGATACCGCCAAATCCCACCATCCTTCCACCAGATGTCGGCGTACAGTTTGT
CGCGCAGCAAACGTTGGCCTGCGCAAGAATGTTTCGTGGATCAGTAGAACACTTGCAATC
CGATTAAAAAGTTGACAGCGCAACCACATTTCATATGCCCCTAGCTCGGCTAAGTTACTC
CAGGATTTGTGCTCCGTTCCGTATGTTAGCTCTGTGCCAAACTCCCCGCTTTGCACGGTA
TCCAACAACGACCCGGACCTGCATTGCATACGCCCCACAAAGAGTATGTTACAAAGTCCC
CAACCCTTCCAAAAACCACCACATCATGGGTCAATAATTAGGAGAACCCAGAAAGATATG
CATTTCTATTACTCGTAGGAGCACCTCATTAGTGCACGAGTATTAACTTCATGCAGAAAA
CCAAGAGTACTATTCATTTCGTGCAAGAAATGCTGTATATCCAGAGGTGAAATGAGCATA
ACCAGGAAGGTATGAATGAGTCACAACGAATCACATGGATGTTTTCCACAGTTATTATCA
AACATTCATCAGCAATCTCGCGTTTCTCCTCCCGCCAAATATTATTCGGATTATTCGGAA
TTGCTCTGCGTACGACCTGATAGTTACGATTCAGGTCCGACGTTCTGATCCCAGGATTAC
CATTGATGCATACATCTGATCCAAGGGTGGCTTATAAGGACCGGTTGCAGAGGACCAGAA
CCTCAGCCCAGGCAAGAACCTCGCCAATGGCGCACCCTGTCCTTCTCCTTCTCCTGGCGC
TCCTCCTCCTCCTCACCACCCCCGCAATCTCTTCCTCCAAGAGAACTCAGCCAAGGTTCC
CGGCCATCTTCTACTTCGGCGACTCCATCTTCGACACCGGCAACAACAACCACATCCCGA
CTCTGGGCCTGGCGAACCACCCTCCATACGGGAGGGACTTCCCAGGAAGCAGGCCGACGG
GGAGGTTCTCCAATGGCCGGCTCGTCCCGGACCTCCTCAACGAGAGGCTGCAGCTCAAGG
AGTTCTCGCCGCCGTTCCTGGACGCGGGGCTGTCCGACAAGGACATCATGACGGGGGTGA
ACTTCGCGTCGGCCGGGTCGGGGTTCGACGACCGGACGTCGCGCGTGGCCAACACCATGC
CATTGTCGGTGCAGGTGGACCTCTTCAGGGACGAGTACCTTCCTCGGCTCAGGAGCATCT
CCGGGGACAAGGAGGCTACCAGGATCATTGCCAGCTCTCTGATGTTCATCAACTCGGGAA
CCAATGATTTCACACGCTACTACCGTTCATCGAAGAGGAGGGTGGACATTGGTGAATACC
AAGACTCGGTGCTCCAGTTGGTTCATGCCCATGTCAAGGTAAACTTAGGCAGTTCTGGGT
TTGTTTCTACTAAGCTGTTTTTTGTTATAATTCTGTAACACATGGACCACAACTATGTTT
ATTTTCTCAACAACGAAAAAATCCCTAAACTGGAATGCAGGAGCTGTATAAAGTCGGGGG
CCGGCAGTTCATCTTGGCAGGTCTTCCTCCATTTGGCTGCATACCCTTTCAGATCACATT
GAGTGGAGACCCTGAGAGGGGTTGTGTGGATGAGCAGAACAGGGAGGCCCAGGTCTACAA
CTCCAAACTTCAGAAGTTGATTCCAGCATTACAAGGCTCACTCAGAGGAAGCAGAATTGT
ATACTTGAATGCATACGAAGCTTTTACGCAGATCATTGACAACAGCAATAAATACGGTAT
GTTTTCCAGTAGTGTCATGACTCACAACTTGGTTTTGCTAGTGGCCACCTCTAAGATCAC
TTATAGTTAGTTCTATCTTAATCATATAGCTAAAGCAGAACTAGTATGCTACAAATAGTC
AGTTCTGCTGAAAAGCACCAAGATTGCATCACAATCCTACCTAAAGAAGAATAAGGAAAG
CATGGTGTTATACAACTAGAAGCTGTCAGAAAACCAAACAGCTAACGGTTTAATGGCAGA
AAGCAGAGTTATCAGTTTGTGTTACCAGTTCTGACAAACTTTGCCATGATAACAGGATTT
ACAGAGACAACACTGGGATGTTGTGGGACTGGGCTCACAGAGGTCGGAATACTTTGCAAC
AGATTTACCCCTATCTGCAGGAATGTGTCATCCTATATATTTTATGATGCGGTGCACCCA
ACAGAGAGGGTTTATAGGATAGCAACCGATTACATAGTGAAAAATGTAATTCCACAGTTT
TAACGAGTCAAATGCTCAAATAAGAATTTCCTCGTTGCATTAACCTAACGTGTTTGGCGC
ATTCTCTGACTTTGGAGTATATAATATGGTACGATCAGCATTCTCAGCAATTGATTTAAG
GAAGGAAATTAAGAAGTCAAAGGCATATAACACTGATCAGGTTGTGAGAAGGAAACTGAC
TGGGAGTGACCATCCTTGCCTCAGGTAACTTCACAGATGTATAACTTGTGAATGTGTGAA
CCTCTTAGGCCCTGAATCATCCGTGCAAGCAATATAAAAGAGGATTGTGGTATCCAGTCC
AATCATCTGCAGCTGACAAAGTTGACTAGTTAAAATGTTTCAAATGCGTACTTCATATTC
GAGAGAATTGGGGTTGCAAAACAAACCTTACTGAAGGCAAATTAAGAGAATGAGGATACA
GAACATTGTTCACCTACCGCGGCACTAGGATTAAGGATATATAACCACTTGTTCATAAAA
TGAGTTATCAATATTCCAAAATAATGCACAAGCTCAGAAGACCATCATTTTAAGTAAAAA
GAGCACCGGTCGTGCATGATATCAGCATATGTGCACACAGTCGTAGTATTCAGTAAATAA
CAAACGCCATTTGTTAGAGGGTCATAACAAGCTTACTTCAGGATAGCAACGTTCCGCAGT
TCAACGAAGAGTACTTAGAAAGCGTCAACTGTTGGCAATTGTAGCCTTGACTCTTTCAAA
AAGAATCAAAACACCAAGTGATTGATTTACAGAAGGAACACCACAATCAAAAAAGGGACG
AAAAGGCATGCTTTGACAAATAGTGCAAAAGTATAAATGATTAAGAGAAGATCTGCTATC
CTGTATGGATAGCATTACAAATTTACAATAATTCAAATGCATAAACGATGCACTGTTTGA
AAGTTGTGATAAATTCAGGGATACCAGTGCCACATACCTGCAAAAACTGAAAAACAAATC
CATCCATACTTGCAGTAACCAAAGAAATACTAGCACACATATAACTTCAGAATTGTGCGC
AGCACACCATTGCATGTTTCATGAATTTGCAGGTACCAAGTACTCTGTTTTGGATATTTC
AACATCGACTACATACAGACTGAAATGGGTTAACAAACACACTAAACGTGTCTATATACA
TCCGATTCAGAAAAAAGTTAGAACATCTTATATTTGTGAACGGAGCAAGTACGTGCTATA
GATTGGTGGTTGTGTATCTGTTAAGTTCTCCACATTTGTTTAGCGTGGCACTTGCAACGT
TTAATAGTACACCACTTGTAAGTGAGGGTATCCATCCAGCAGACCAAGTATTTGCCTTGC
TACATGATTGGCTCTCCATGCTGCCTCACCCAAAATCACTCTACCCTGAGAAGCCTCAAA
TTCTAAGTTGGACAAGGAACCTCAGTGAACATTAGATAGTGCCTGATAGATACCCAGTAT
TTCCTAATCATCTTCCACTTGTGTTAACAAAACTGAATTAGAGTTTGTACCCTTATCTAA
CAACTTTGTAACAAGTTTTTTTCTCAGAAACGGAAGGAACAACATTATTGAAGATTATAG
ATACAGTAAATGAAATACAAGAGAAATAGAGAGCAATCTGTTCCAAGATATATCGAACCC
ATAGGAAATGAGGGAGCAGACTTAACTTGCATCCTTTCTATAATAAGAATCATACTTTCT
ATAACAAGAACCATACTACTAGGCCTAGCCATCAGAAAGTTGGGTCGCACACACACGATC
ACAACAGACAACAGACAAGCTTGGCGGATCTGAACTTAAAGATAAGCGTTTCCCCTTCAT
CACCTGAACAACTAAGCACTGAAACACAAACGAAGAAGACAGATAATGTGTTGAATAAGA
CTACCCTTAACAACCGACAGATAAACGCCTACAATATTTTACAGAGCTGGAGAAGACAAT
GATTTCCACGTCTAATATAAAGCCTAACCTCATGGCAAAACACCATCAAATCCAAAATGG
CACCATTATCAATGTTCAGAACTTCAGATCTCCGCCACAACAGTACATTAGTGATGATAC
GAAAATCACAGGCAGGACCAATAAGATGCTACTACAAGATAACCAATCATTTCCCAATTC
CTTCAAACAAATGTTGGATGCATGCCTCAACATCCTCCGGGGTATGCTTGATGAACAAAT
CCTGCGGAGCATCTGGAGATGATCTCAGCCTAGCAATCAAGCCCTTGTATGCAGGCAGCA
CTGAATCTGCTATTGCTGCCTTGACATCGGCACGCAGCTGATCATCTGTGATCACCCACT
CAGACTGCGCCGCCCGAATCTCCTCCAGGTAGCCATTGAACATCTGCAGTTTCTGAAGCA
TGGCCTTTGGTGGGAGACCTGAAAACCCAGAGCCTCCGGTCTGCAGCACCGACATCACCT
TCGCCCAAGCCCCACGCTGGTACTCCATACTCCACCGGCGCACTCTGCTTAACATCTGCT
TCATCCAGTCATCCCCAAGTAAAACCCCAAGCTCGCTGTCATTCACCTTGTGGATGACGT
ACTTGCCATTATTCATCAAGAAGATGGAGGCCAGTGGCGGGTCCCTGTATATCTTGGATT
TGCTCTCCAGATTCTTGTGAAGCACATCCATGATCCACGCAATGTGCACGGCAAGCGATG
AGGTGGGGCGGTCAGGATCGACGGCGATGGCGGTCACGCCAAGAGCACCCAGGTCACCCT
CCATCACCTCTTCTAGTGTCTGTCTTGAACCACATGCCGCACGGAGATAATTCATGACAT
AGCGAGTGATGGGGTGTATGCCACCGCCGGGCACCGCAACACGGGCTGGGTCACGGCGGA
TCAGATTTTCCAGCTCCATGAATATACCTTTGATGGAGGAGCCGAGAGTGTTGCATACAG
CAGAGACCTCGGCGCGAAGCGCTGCAGAGTAGGGGTCGGCGAAAACAGGGTCGAGGTCGG
GGAGGAGATCACGCACCGCCTCGTACATGTCGATGACACGAAAGAGGCGCTCTGGCGCAC
GGCTGGCAGCGGCAACGGCATCGCCGAATGAGATAAGCTGCAGCGCCTGGGTGCGAACCG
CGGCGACGAAGGCGAGGTCGCCGTAGGGGGCGAGGCCCTCGAAGACACGGTCGGAGAGGC
GGCGCTCGCTGGGGATGAGGATGCGGAACACCATCTTGAAGGCCGGAATCCAGCGCGCAA
TGTCGAACTCGAGCTCCTCCCAGGGCAGGGAGTGGACCTCGTCCGAGGTGCGCGAGCGGA
TGCCGAGGCGCGCGACGCTCTCGTCGATGAACCCGCGGCGCGCGGCCGCGTAGGCCTCGG
CGCACTCGCGGCCGAAGCCCGCATCGACCATCCTCCGCGCGATCTGGTGCACGTCGGAGA
CGGACCCCGGGGGCAGGGCGTCGATGACCACGTCGAAATCCGTGACCGGCTTGGCGATGG
GGATTGGCTCGTCGCCGTAGCCGTCGTCCGCGTCGAAGTCCTCGTCGTCGCTCTGCTCGG
AGTCGAAGCCGCCGGGCGCCGCCGGGGCCGCGTCGTCGGGGCGCTCGATAAGCGCCCGGA
ACTCGTCCTCCAGCCGGGCCATGCACCGGCTGAGCAGCTCGTCGGCGCGGTCGAGCAGCC
CGCGGTTGGTCCCCGCCGCGTCCAGCTCTTGCACGGTGCCGATGAGGTCGTCCACCGCCT
CCAGGAAGGCGTCCGCGTCGGCGGAGTCGGCCCAGACGAGCCTCTCCATGGTCACGAACT
GCGAGATCTGCCGGTCGAGCGTGCGCACGGTCCGCTCCAGCGACGTGACCGGCGGCGGCA
TCGAGTGCGCCGCCGCGGCAGTGGGCAGCACGGGCGGGGGCGAGGAGGCCGGCATCGACA
TCGAGTGCTCCCCTGCCCCTCCTCCTCCTCCGGCCGCGGCCGCCGCGGCGTAGAGCTTGT
CGAGGGAGAGGCGGCCGTCGTAGTTGGAGAAGACCTTGAGTATGTCCTCCGTCATGGTGC
CGGTGCGGCCCAGCGTCTTGGCGATGTGCTGCACCGTGGCGAGCAGCTTCTCCTCGCCGT
CCTCCGCCATGAGCCGCGAGAGGAACCCGACGCCGGAAGGCACTCCCGGCGAGGTGCGAG
CTAGGGTTTGTTCGGTCACGCGGCGCGGCGGAGGGAGTGGCTGCGGTGGGGGAGAGCGGT
GGTGTTCTGTGCCGGACAGCGACAGCTCGTGAACTGGGCGCTCACCTGCTAGCTGCTAGC
AGAGCACGGCTGTAAATTGCGACGTGTCGATAAAAAAAATTACCGTGGGGAGAGGAGGGT
AAATTCGTTGTGGGCTGTGGGTTTTGGGGTGCTCTTCGACCGGGTGGACGGTCGAGTAAA
AACTCGGTGACATCGGGAGAGGGGAAAGGCTGGGAGACCGGGCCGCAAAGCATGAATAAA
TGCGGACAGGGACACCGCTCGGGAAGACGGTGAGGGGTTTAATTTGTCGCTGACAGGTGG
GGGCCCGGCCGACGGAGCGTAGTGCTAGGGTTTTGGGCATTTGGTCGCGTCGACACGGAA
AGGTTTTAGCTACAAAGTGCGGCAGAGGTGGCGTGATCAACGGGAAAGTAGTGGTGGTTG
GCTGCTTAGCCTGTGCTCGGGCTGTTGCGTAGGGGAGGAAAAGCCCCAGGTTGTGCTTTT
GACAACGGAAACGTTTCTGGGCCGGTGCCCCTGCCTTCGCACAAGATCCGCGCGCACCTC
GCTGATTAGGCATGTAACATTGTTTTGTTTAAATTGTTACAACCAACATAATATTTGCTA
CAAATGTTTTTTTCTATATTTATTCAGTAAAAATGTTGCATATACGTTTGGTTGCAACTT
CAGTTCGTTGGATTTTTCGTTACAATCGGTGTTTTTTACTATTGCTATAACCGTGTTAAT
TTTTGCTACAACCGGCATCATTTTTTGTTGCAACCGTTCACTAAAAAAGTTGCATCCACG
TTCACGTACATATTTACTATAACCGGTGTTTAATTTTTGCTACCACGCACCATCAGCTTC
GTTTTTTTGCTACGATCACGTAGATATTATTTTGCTATAAATTTTGTTTTTCGTTGCAAC
CGTTGAAAAAATTCCTGGATCGCGCTGAAATTTGCTGCATCGAAGAAAAAAATGTTGCAT
GAAGATCTAACGATGCGGACGCGCGGGAGTTGGTGGATCGTACGCCGGGGCAGAGCACTC
TCCTTTTGACAATGGCTTAGCCCAAATCGAATGAAGGCCCGTTGTTGGCAGCTTAGAGCA
ATTCCAACGCGTGGATCTAAACCAACGACGCTTTTATTCGCATTTTGTTCGTTTAAATGG
TCTGATGAATATCCATGTCCGCTTTTATAATTAGGTCGGCGCTTGCGTCCAACGTGGCCA
ACGATCCTTTTTAGACAACGCGAAAAAGAACATTTTGAATAAACATAAACTATTGATTAA
ATAGTTCACATTACATTTAAAACATAAAATTTAATAAAGTAAAAAACGAGGAGCCTAGGC
GTCCACCTCCTCGTCGTCGTCGGGGCTGGTGAAGTCGACAAGTGTCGGCGTCGACCCAGT
CCACGGGAAGGTCATCTCCCACGTGGCGGTGACGTCGTCCGCCGGTGGTTGCACCGCCGC
TTGCTCGGCGGCACGGAGCTTCTCCTCCCCGGCTTCAGCCTCACGCTCCAGCAGCTCGAT
CCGTCAGGCCTCTTCGCCCTCCTCCCTCACCCGCCGCTATCGTCGGTAGACCGCCTCCTG
CTCCGGCGTC