Contig Data
morexGenes
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Map Locations of contig_132057 (4658 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_132057

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3616 1 1201 bp None Available Available LOC_Os12g43890.1, FRAME:+2, EVALUE:1e-28, 13112.m04629 protein GNS1/SUR4 membrane family protein, putative, expressed
MLOC_3617 1 353 bp AK372809 Available Available None





CDS Structure of MLOC_3616






CDS Structure of MLOC_3617






Contig Sequence (4658 bp)

>contig_132057 4658 assembly3_WGSMorex_rbca.fasta
CTAAAGGATTGTAAGGAGAAACCCCTTGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGAGGACTCTACATTTTATATTTGTGAAAAAACACTTTTGAGTCCATAGGAAAG
CCAATTCTAATGAAATGGCGTGAGGTATTTATGATGAATTGGTTGCTCAAGTGCTTAGAG
ATTGCCACCAAAAATATTTGTCCAAAGCCTTCACATCAAAATCAGTGCCACCAAGAATTC
CATTTCGGCCCTACCGTATTTTCTAGAGGTAGTACCTTTGCAAAACCCTAATCTCTCGGT
ACCACCAACTTTCATGTTGGTGACACCAAAAGTGAGCAACCAACTCTCTAGTATATCTAT
TTCAAGAATCGGAATTTCCAAGTTTGAAATCGGTACCACTAGTATTTGGAAACTGCCCTA
GGTCATTGAATCAGTACCACCAAGATTTATATATCGGTCTCACAGAGAATTCAAAAGTTG
TCACATTTAGTACAAATTGGTACTACTGAGATTCATTTCGGTGTCACCAAGTTGGAAAAT
AATGTTGTAATGGTTGNNNTTTGGGAGATGCCTATATATACCCCTTCACCACCTCTCATT
CGTAGAGGAAGCACTCAAAACATATACACACTTCCTACATTCATTTTTCTTAGAGGGAGC
CACCTACTCATGTGTTAAGATCAAGAGATTGCAATCCATCCATTTGAAAGTTCATCTATA
GCCTCCCCAAGTTGCTTTCCACCATATCAATCTCTCCTACCCATGGCTAATCTGTGAGAG
ACTGATTGAGTGTTNNGGAGACTATCTTTTGAAGCACAGGAGTAAGGAGTTCATCGTTCT
ACCGCATCTATACCTTTTGGAGGGTGGTGACTCCTAGACTGGTTAGGTGTCGCTTGGGAT
CCTCCTACTTCACGTTGTGCAGTTGAATCAAGAAATTTGTACGGGCAAGGAAATCGCCTA
CTTCGTGAAGATCTACCCTGAGTGAAGCTAGTCTTGTGTGGACGTAAGCCATGGTGGAAT
AGACAAGGCTGCTACTTCGTGGACTTTTTGTGGGTGGAGCCCTTTTTGGACTCTCTTAGC
CATTACCCTCCATGGGTTGAAGTCTTCACAAACATGGACGTACGATAGCACCACCTATCA
AAACCACGCCAAAAATCATCGTGTCAACCTTTGCGTTTAATCTTCCTTCTCTATCCTCTA
CTTACATTTGCATGTCTTTACTTTCTGTTGTACTCTTAGATATGAATGTGTAGGGTGAAC
TTGACTAGTCATAATTGCTAAAACTGGCCCCCAAGTAAACTTGAGAAAGGCTAAATTTTT
ATTTGATCAAGTAGTCTAATCCTCCCTCCGTCTCCCCCCGGTCTTTTAGCCATACTTCGG
ATCCTAAAAAAAAAGCATACCTCGCGCCTTCTCCAACTCCGTGATGGTTTTGTAATAGCC
ATACTTGCCAAAGCTATGCACCGCGACGGCTTCGTTGAAAAGTGCCTCCCGCTTGGCATT
CTCAGCCTGCATCACGCCATGAGGAGAAGTCAAGAAATAAGTCACCAAAAAAGACCAGGC
CCTGCTACCGCGTGGCTGTATAGTCGGCCCTGGTCTCGAGGATTACACAAAGTGTGTGTG
TCGGCGCGTCCTCACTAGAAAGCAAGGAAAGAAAGAAAAACACAGGTCTTACCGTAACTG
CCTCCTTCACCCGTCGGATGTTGCTTTGTGCAGCCTCGTCAAAGCAGGAAAGTCCTTTGA
GGTAGTGGGCCACGATCCGAGATGTCTCGGCGTGCAAAAGAGCCTGCCCGCCTGCCGGCG
GCTCGTTCGGCACAACAGAACCACGGCCCAGCCCCCGCCCGATCCTCATGGGCGTCCAGC
ATGCAGCGCCGCATCCGACCCGACCCACTGCCAGATGACCCCACCACACCCACGGCGACT
GGCGCTGGACTTGCAGTGATGACAAGGGCCCGGGCATCAGTCTCGGTCTACCTCGCTCCC
GGCACCGGCAGTGACATCACTTGGTGATTAGCCTCGGCGTCGGCTACGTCCAACGTCCCT
CATCCTCCAAGCACCGTCTCCAGCGCGGCCTCGCCAGGACCGGTCTGGTCCTGCACGGCC
GTGCCCGGCTCAGCCAACTGAGGGGTTGCTCCGTCCCCGGCCGGCTGCATGGTCGGCTCC
ACAACCGGCTCCAGCTCCGCCATCCTCGTCGGCGTCGAGTCTAGCACCCAAACCAAGCCC
ATCTCCGACTGTGCAGCATGATTCGACTCGTGCAGCTAATTGGTGCGTCGCTCCACGGCT
GGTGCTGTTTCCGGCACTATGCACTTCGCTGGAAAAAAAGTCCATTTTAAACTCTGAATT
TATAGAGGTTCCATGAAATAAACCTTTAACTCGAAATCCCTGTCGATTGCACCTGAACTA
TATAATCCTGATCTAAAAATAAACCCTGGATTCGTAGAGGTTCGATGAAATAAATCTTTA
ACTCGAAATCCCTGTCGATTACACCTGAACTATATAATCCTGATCAAAAAATGAACCCTG
GATTCGTTTGGCAAACTGGGATTGCTAACTTGACCGGAATTGGGCTGCGCACGAGTGGGC
CAGACATCGTCGCCTTCCGGTGGAGCCCCTCGGGCCTCTGGTTCTCCACCTGGGCGTTCC
TCCTCGGCTTCCTGGCCGCGTACGTGTCCGTCTGCCTCGCCGCCGACGCACTGCTCCTCC
GCCGCCGGAAGCCGGTCCCTTTAGGTCCCCTCCCGGCCGCGCACGCGCTCCTGATGGCCG
CCGTCTCGTCGGCCATCTTCGCCGGCACGCTGCTGTCGGCGGTGGCGGAGATACGGGACA
CGCGGTGGTCGTGGCGTGGCCGGAGCCGGACCACGCCGCTCCGGTGGCTCATCTGCTTCC
CGCCGGGGACCCGCTCGTCCGGTCGCGTCTTCTTCTGGTCCTACGCGTACGTACTACCTC
TCCCGGTACCTCCACGCTTTGCGCGCCGCGTTCGCGGTGCTCCGGCGCCGGCGCGGTGCC
GCGGCCCGGGTGCTGGCGCACGCGTCGTCGGTGGCCATGGCGTTCCTGTGGCTCGAGTTC
TCGCAGCCATTCCAGGTGCTGGCCCTCCTCGCGTCCACGCTCGCACACGCCGTCGCCTTC
GGGTTCAGGTTCTTGTGGGCGGGCATGCTGCCGGCGCGCGCGTGCCAGCTCGGGCTGCTG
GGGTGCAACCTGGTGTGCCACGCGGGGGTAGTGTGGATGCACTTCGGCGGGGCCGTCGCC
GGCGGGTGCAGCGGCATCGGGGCATGGGTGTTCAACACCATGCTCAACGCTGCCATGCTC
TGGGTGTTCCTCCACTGCTACGGCCGCACCCGCGCCGTCCTCTGCGACGACGACGACGAC
AGCGCCTCCCTGCAGCAGCAGCAGCAGAAGAAGAAGGAGATGTGAGAGGAGCGGCGGCGT
GAGGTGATCACCAACCCAACCCAACCCAAAGAAACCATTGTAACATACATCCATTGCTGT
ACATATAGGTAGGCCGGCATCAGCATTTGCATCTGTTGTTGGCGTTGATCGGTTGATGCA
TGGCAAGTGGAATGCCTTCATGGCAAGCTGATGTTGGCGTTTCATGTTTTTTTTGTTTTT
GAAAATGCCTTCATGGCTAGCTTTATAAACTAAAATAAAAGTTACATCATCCGCTAAGAA
ACTCGAAATAAACCCAGGGGGTGCGTCCAACCACAACATTGGTGGATCATCAATACGGCG
CTGCTGGGCTAGCACATGAGCTATCAAATTAGATTCCCGGTTACAATGCTCAATAAGAAC
CTTCCCGGAGTCCTCTAAAGAATGTCGATATTCTTCAAGAATAGGGGCAGTGACCATCGA
GTATCCCATGTTTTGTTTAAGTGCTTCAACAATCACCAAATTGTCCATTTGAATATGTAT
GGAGTTGCATCCAATACTCAGTGCCAGCTTTAGACCCTCCACAAGTGCAGCAGCTTCCGC
AGAAACGGTTTCATGGTTAAGACAGGGCTGACCCTGCACGGATGCGCAATCACTACGCAA
CCGAGCTGGCCGATCCGCCCGGATCTGAACGTGCGTAGCAAATAGCCATCCGTGTCCCCC
TATCCATAGAACGCGACACATGAGACATAGAGTTTGCTTTGTTCTCCCTCACACACGAGC
GACGAATAGCAGGTGTCTTCGCAACATCGACGATGCTCCCGCAACAACGACCACTGCTTC
CGCCACACCGGCATTGCCACACACTCATGACCAAGTTTTTTTTATTTCGAAAACAAAGTA
ATTTCGGACCTCGCTCAAATATGCGATTTTGGAAATCATTTCGGATATTGAGATTTCAAA
TTTCAATTAATTTAAAAAAAATCAAACATAATTTAAATTTATTTTGAAATCAGTTTGAAT
GTGCCTTGAAATTTGGTGTTAAAAATGGGCGAATAGCTCCTGTGCGACGTTTTTTAGGTG
AATTGAAAGGATTGCGACGTCGTTGGTAAGAATGTCTCTGCTGCGACATCTCTGTGCGCA
CAAATAGCCCCCGGCACGACATGCCTCTTAAGCACAATATGTATCAGGATTAGGTGGAGC
CGGACGGGACCCACAGCTTATCCACGTCGGCATGGGACCCAGATGGCGGCTACTACAGTC
AAACAGTTATCCCCTACGCGCGCATCCTCCCTCTTCTT