Contig Data
morexGenes
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Map Locations of contig_131707 (5648 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_131707

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3566 1 593 bp None Available Available None
MLOC_3567 1 506 bp None Available Available None
MLOC_3568 1 914 bp None Available Available LOC_Os01g16290.2, FRAME:-1, EVALUE:1e-34, 13101.m01819 protein DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed





CDS Structure of MLOC_3566






CDS Structure of MLOC_3567






CDS Structure of MLOC_3568






Contig Sequence (5648 bp)

>contig_131707 5648 assembly3_WGSMorex_rbca.fasta
TGCGCTGTGCGCGAGCGGCTGGGGGGGGGGGGTTGGGGGGGGGGGGGGGGAGGTGGGGGG
GGGGCGGAGGAGTGGTGTGTGGGGGGGTGGGGGGGGGCGGGGGAGAGATGGGGGAGGAAG
AGCATAGCATGGTACACTGGTATCTGACCTTGGTGTTGATGTTAATTTGATAGCAGGTAT
ATGATTATCTCATATAGTATGAGCTGTCTTTAAAAAAAGAAAATGGTATTCCAAAAAAAT
CATATATGCGTCTTCCAATGTGCTGGCAAGGTAATTCACCTGTGGTAAAATGTGTTGGCA
AGGCCACAAGCTCTGCTTCATAACATAATTGAAAAACTAAGTATGTTTGAGGATGACTAA
TTCCTGAGGAAGATATATTTTAACATTATCCTGGTTTCCTGCAGCAAGGACATATTGAAT
AACCGATTGTTTGTAGCATCTTGACCGGAATTTTGGGTGGTATATGAGATCGGAATAGGG
GTACCAGGTTTTCCCCAATATTTTACTTATTTAGACATGTGTCCTCTTCTTATAGGATGA
CGATAAAATTCTTGCGCAGGGTACAATGTCAGTCAAAGGCCTCACGTTGAAAGACATCAC
TAAAGGCTAGTTATCACTGTAAAGAAACACTATCTTTGTACATATAATGTTGCAATGGTA
CCACCGAATATATGGGTCTGTTTGGTTTACAACCAAAACTGACCATACCACAATACTGGC
TAGCCCTTAAGAGTTGGCTGCTGTTTGGATACATGCCAAATGTTTGGCTTGCCTGACCTG
CCAAAGGTGCGGCCGTACGTTTGCGCCAAAACAGTGGCATCATGCTGAAGGCGTAGAAAA
CCTAATTTTGCTTTTGCCATGGAATGGCAATTGTGATAATTGTCAAAAGTTAAGAGTGGC
AAAAGTGAAATGTCAAAATCTAGAGTGCCATAAGGAAAATTGGCAAAAGCTAGAGTGCTA
AAAACAATTTCTTTCCCTGCCAAAAAATATGCTCTGGCTCACCTGCTCTTTACCCAGCGA
GACCCACCACATCACTTCCCTTTCCTCATCCTCTCACATGCAAACAATTGGTCAGCTACC
CCTCAAGCTCCTGTAGCATCCTACTTGATTTTATTTTATTTTGACGTGAACATTCTACTT
GAATAATAGCACATGGATCTCCAGCTTCTATCTTGCTCTCAAATTAAATTGGTGTGCATG
GTGATATGCGGGCATAATACTACTTTTGTCTTGGCACTTTGCAGTTAATTAAGTTTGTAC
ATAAATCTTGTAACTGAATGAAACCAAATACTATAAGACCCAGGTTGCAGGTTGCAAACC
AAACAAAGGCCTATCATTTTACCAACTTTTTGGCAGAAATAGTGGCTATAATCCAAACAA
CAATAGCTTACCAAAATATTGGCCATGCCCTTGTTTTCGTCATGCCAAAAATTTGGCTGA
GCTAGTTGGGGCTCAAACTAAACAAGCCCTATATGCTGGATCAATTATTCAAAATGTTTT
CATTGTGCTTTTGTGATGCAAAGAGAAATGTTGTTGTTCCAGGCCTTGATAAATCATTCA
GTGGTACTAAACAGATGAGCTAAGATGAAACTCCTTCGCGTTATCCCGTTAGTTATCTTG
TAATTATTTTTCTTTTCATAGCTTTTTATATGAACAAGCGCGCACATTGTTTTATATCAC
CTTAGTGTACAGTTTTTGTTTATGGGTTTTTTTACGTGAACAGTTTTCTCGGTCCGAAGA
AAGACACAAACAAGACAAGTGTAGATGTCAAAAATAGAATTTCCTGTTCAATGTCAAGAC
GAGCATTGCACATACACGTTGACTAGTTTCTCAAGTTACCTTTGTCTGCCCTTCAAACTC
TGGATTAGGGACCTTCACTGAAATAATGCACGTCATTCCTTCTCTTACATGCTCCCCACT
CAAGCTAATATCTTTATCCTGCAAAAACCATCATTTGTTTAGACAAATGCCTCAACAAAT
TACAGATCCAACTTATTCAAATATTCATTCGATGGAACAAATAAGTAAGCATACAAAGTG
CAGACTGAATATATATATATATACTAATATACAGCTGTTACTATGGTCCTTATCAAACAA
ACTTTAACAGAACAGTTTGAAGTCAGAAGGCTAGAGTTGCGGATAGGACATAAGGTAGCA
TTTACCAGGGAAGAACAAAAATATACAGTATGTGCTATCAGTTATAACCTTCATAATCTT
CGACTTCTTTGCAAAGTTATTAATTGTTCTTGTCAGGGAAGTTTTCAGCCCCTCAATATG
AGTACCACCATCAATAGTACGGATACTGTTGGCATATCCCAGCACTGTATCAGAGTACGA
ATCAGAGCACCTGTAAATCAGGACAACCAATTGTTTCAGAAAGGCATACAATTCTTCTCT
AGAAATAAAGCAAATGAAATGTGACACAAACTTCAAAATTGACCGTGAAACGTTGTGTTA
TAAAGTTGAAATAGCTTTTGATACGTGCCAGGAATAATGCTATATAGCCTATAAGGGAAG
GAAAGAGAAACCCTTACAGCTGTTGTTATGACCGTCGTACACTTATAGCCGGAGGAGGCC
CAATGGCGCGGGCAGTTAGGGGCTTGGCCCAACTTATCGTTATTTTTGTTAGCACACAAG
GGATTATATAAACACATGTAAAGACTCGTTTTGGAGATAAGTAGCAACCATAATTGCTCG
GCTTCAGCCGAGACCCCCAAACCCTAGCCACCGTTGCGCCCTTCTTCCCCGCGAGATCAC
GGCACCCAGCGTCGTCACCCGCGCCTCCAGCCTCGCCAGCCCTCCTTCCATCCCTACAAC
CTGAGACCACGTCCTGGTAGGGGCCCTGTTCCTATCAATCTGGTATCAGCTGTCTCGGAT
GCAATCATGTCCACTTCTCAGCCCACCGCCGCCAATCACAACCACGCCGCCACTGCACAC
CACGGCAGGCGCGCCGGACTTGTCGGGGCCGAGCCCATCTCCCGCCTGGACGCCGCCGGG
CTCCGCCCCCATGTCTTCACCCCGGAGGAGATGACGGCTGCGCTCTGGGAGCTCGGTCAG
GCGGTTGCGGGCATCCGTACCTTCCTCTCGGGACCCTATGCCCAACCGCCACCAGCCCCC
TTCGCCCCCACCATGGCGCCGCAGCAGCCGCAGCTGCAGTCGCCGCCCCCGCCGACCTTC
CCGGTCGCCCCGCACTCCCATGGGTTACCGTCCACCGGCTTGGGGAGCGACCTCGCCCCG
GGGGTGCCCATCCACCAGGTCTGGTTCCCCCCGTCGCCATTCCCGTTGTCGGCCTGGCTC
GTTGGGTCCCTCGGGCCGGTCTACACGATGGCCTCGGGCCAACCGCACTTGCCGTCGCTA
GCGACGTCGCACCCTCCAGTGCCGCCAGCCCATATGACGGCGTGGACGGGCACCTATTCC
ACGACGGCACCCCGCATACACGGATCCATCGTCCTCGCTGTTCAGCGCGGAGGGGGCGCA
CCCGGCCGCCATCCACGCCCAGCAACCGCCGAGATTCTCCAAGCTAGAGTTCGCCACCTA
CGACGGCACCGTGGACCCCCTGAATTGGCTCAACCAATGCGAGCAATTTTTAGGGGGCAA
CGCACGCTCGCGTCCGACCGCACCTGGATCGCCTCGTATCACCTCCGGGGAGCAGCTCAG
ACGTGGTACTATGCCCTCGAACAGGATGAGGGCGGCATGCCATCATGGTAGCGATTCCAC
AAGCTGTGCCTCTTGCGCTTCGGGCCGCCGATACGCAGGAGCCGACTGGCGGAGCTTGGG
CGCCTGCCGTTTCTCTCCACGGTGCAAGACTTCACCGACCGCTTCCAGGCGCTGGCGTGC
CACACCCCCGGCGTCTCGGCACGCCAACGGGCCGACCTCTTCATGGGCGGTCTGCCGGAC
CACATCCACGTGGACGTGGAGATGCGCGGGCCACAGGACCTCCAGACGGCCATGTACTAT
GCCCGAGCTTTCGAGCGTCGTACGATGGCCATGCAGCAGGCGCCACCGCTCCGGGCCGCT
CGCCCGGCCCCCGCGGCACGTCCGTTTCGTTGGCTCATACCGGCCGAGCAACTCGAGCTC
CGTCGTCAGGGGATGTGCTACCACTCTGACGAGCCCTACGTTCCGGGCCACGTTTACCGG
CGACTCTTCCACTTGAAGGTTGCAGACTACATCGAGGAGGACGCCACTGTTGCCGGGCTA
GGCGACCTGGCCGCCCCACTTGACGCGGAGGTCGCCCCGGGGCCTGCTCATGCGAACGCC
CTCGTGGTCTCCCTCCATGCTCTCGCGGGTATACGGACGGAGAAGACGATGCTGCTGCCG
GTGACGATCAACGAAGAGCGCCTCCTAGCCCTGCTGGATACGGGCATGTCGGGGTCCACC
ATGCGCCGCTGGCGCTCCAACCGACTGGCGGGGAGCAGCTTTGGGTTACCGTTGCAAACG
GTGATCGCCTCCACTGCCAGGGCATTGCTCGACATGTTCCCCTCATCATCGGCGACGAGC
ACTTCGCCATCAACTTGGGCTGCTTTGACTTCATCCTCGGCGTCGACTTTTTGCGGACCA
TGGGTCCCATCCTTTGGGACTTCGACGTCATGACGATGATCTTCTGGCGCATGGGTCGCC
GCGTCCGGTGGGAGGGCGTGTGTGGCGCTGCCCCAGCGCACCCCCAGCCCTAGCTGATGG
CAACCTCCATCGACCCCGCGCAACCCATGTGTGCTCGCCTTTTACAGCAGCATAGCGACC
TCTTCGACGAGCCACATGGCCTCCCACCAGTCCGGCCCTACGACCACCGCATTCACCCGC
TGCCGGGCACAGCACTCGTCGCCGTGCGACCGTACTGCTACCCCTAGCTACAGAAGGACG
AGCTGAAGTGGCAGTGTGCGGCCATGCTCGCCTAGGGCATCATCAGGCCTACTACCTCGC
CGTTCTCGGTGCCGGTGCTCCTCGTTCGCAAGGCCGACAGCTCGTGGCGCTTCTGCATCG
ATTACCGTGCTCTTAACACCAAGACGTCCAAGGACAAATTTCCAATCCCCGTCGTTGAGG
AACTCCTGGACGAGCTACACGGGGCACGCTTCTTCACCAAGCTTGGCCTTCGCTCCGGCT
ACCACCAGGTGCGGACGCACCCGGACGACGTCGCGAAGACGGTCTTTCGCACACATTACG
GCCACTTCAAGTTCTTGGTGATGCCCTTCGGCCTCGCCAATGCCCCGGTAACATTTCAGG
CCCTGATGAACGACGTTCTCCGTCCCTGCTACGGTCGTCTTCTTCCGGGTCCGGAGAAGG
TGTTGAAGGCCCAACAGAGCCGAGGTGTTTGGCGCCTGATGATCCAGTGGCAAGGCCTTC
CGGAGGAAGACGCCACTTGGGAGCAACTCAAGGAGTTCCACCAGCATTTCCCTGACTTCC
AGCTCGAGGACGAGCTGTTTGCGCAGGCGAGGAGAGATGTTATGACCGGCTTACACTATA
GCTGGAGGAGGCCCAATGGCGCAGACAGTTAGGGGCTTGGCCAAACTTATCGTTATTTTT
ATTAGCACATAAGGGATTATATAAACACATGTAAAGACTCGTTTTGGAGATAAGAAGTAG
CAATCATAATTGCTGCCGAGACCCCCGAACCCTATCCGCCCCTGCACCCTTCCCCCCCCC
CCCCCCCC