Contig Data
morexGenes
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Map Locations of contig_131255 (2965 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_131255

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3506 10 8693 bp None Available Available None
MLOC_3502 1 1692 bp MLOC_3502.1 Available Available LOC_Os07g14700.1, FRAME:+3, EVALUE:1e-91, 13107.m01543 protein harpin-induced protein 1 domain containing protein, expressed





CDS Structure of MLOC_3506






CDS Structure of MLOC_3502






Contig Sequence (2965 bp)

>contig_131255 2965 assembly3_WGSMorex_rbca.fasta
CTCTTCGGGTGACGGCGAGCCGGGGGAAAGGTGGGAGGAGGGCTGGAGGCGCTAGATCTG
GGGTTTCCCCTGAGCCGCCAGGGAGGGCGACGCGGGGGACGGGGGAGGGGGTCCGTTGCC
GCATATCCACTAGTCTTGATCTGATCCTGCGCCGCAATTACGCTCGACGACTGTACCAGT
TGACCCGTTGACTGAACGTTGGTCCTCCACTCGTTGCTTTGCCCGGGTGTTTTGCCATTG
CTGCCAGGGAGACAGGGACACACCACACGACGTTGGTGGGAAACAAATACAGAGGGAGCC
AATTATCACACGCAGCACCCGTAAAGCAGCCCTTGCAGCTCCCCAATCCGCTCCTGCGTT
CGTCCACCTCCCACTCCAAGATCCAGCCCAAGATCCAGGCAGGCTCGGCCGCAGGCCACA
GCCAGCCATGTGCTGCAGCGAGTGCGGCTGCTACGACGCCTTCTGCGACACCTGCTGCCC
CTGCGTCTCCCACGACGCGCGGGAGACCATCCTCTGCTGCGCGGCCTGCCTCGCCGTGCT
CGCCGTCGTCGCCCTCTTCGTCGCCCTCCTCGCCGCCTACGGCTTCATCCGCCACGCCGA
GGTGGCCGTCGTCGACGCCTCCCTCACGCGGCTAGCGCTCGCCACCTCCCCGGCCACCGC
CTTCGCCTACAACCTCTCGCTCACGCTCACCGTCCGGAACAAGAACTGGGCCATGAGCGT
CTGGAACACCCGGCCGCTCGAGGCCGACTACAGCTTCGACGGCCAGCGCTTCGAGCGGGT
CAGGCTCGCCGACGAGGGGTCCACGCACCCCGCCGGCAAGACCCAGGTCTACCACCTCGT
CTCCGGCGCCGACGGCGCCTACGTCGCGCTCGGCAACGCCGGCGTCGCCGAGTTCAGGGA
GGAGAACAAGACCGGGGTGTTTCAGGTGGAGGTGGCGCTGTCGGGCCAGGTCCGCTACCA
GGCGCACCTCACCAAGTGCAACTTCCAGGCCAAATGCCCGCTCAAGCTGCAGCTCGCGCC
GCCCGGCACGACCGCCATCGTCTTCCAGAAGGTCAAGTGCAAGCTCGCTTCGCCAGATCA
GAAGAACTGCTAGTGATTGCTAAGATTCGTGGCTTTCTTTCTCCTTCATTTTTTCTCCTC
AGTAGTGGTTTCTGTCAGTAGATTTTAATCGGAGGAACCAACTGCAGGTAGATTGTCCCC
ATTGCCATTGGTGTGCACTTTTCTTCTGTTTTTTCTTCCTTCCAAGTAGATTAGTGTTTC
AGCAAAAAAATCCATGAAAAATACCTTGATTCTTGTGGCTTAACATCTTGGCTATCTTGC
TGAACACACACTCATCTCCTAAGGTCTTTTTACCAGTTGGTTGCCAAAGAAAGCATGCCA
GAAACCAAGTACTTATGCAGTTACTGTTACAAACACCAACTTAATTTATTTATGGAGTCC
TCAAACTTAACATCTAACAACAATTGCAAACATTTCAATCCTATGTTCGACAATGAATGA
TGGATGTAGCGCATCATCCACAGCAAAGCAAAAATAGATGGAGTGTCATCTATACCTATT
TTCACCAGAACACTAGTGCACTTAGGGATTCCAATTTTTTTATTATGGACTCAGTTTATG
ATTGAGCATGTGAACTACCAAAAGAATCTACGCCTGTTAGAAAAGTCAGTATGATAATAT
CTCTATTGTAAAAAATTCATGTACCAAGTCCTGTTATGGCTGTTAGTCAAGTTCCAGGCA
GCACCAACAGAGGCAGCAACAATACCTCTTTAGGATAGTTATATTATATAGGATCTGTAC
CTAGAATTAGAATCGGAAGCTCTGTTTTCCCATGAAAACAGGACATGTATTCAGTACCTA
TCTCATTACTGCCACTAAATATTGCACATATAAATGCACAGACTTATCAGATTATCCATA
ATTTCACCAGTGTCACCATAACGGACTAGAAACTATGCCTGCAAACCATTACATCAACAG
GTTTCTAATGTATGTTTGAGATGCAATAACGCAATACAATCCGCAGTCCACTTTTCAGTT
TAGAAACTCTGCTTCATCTAGCTTATGAAAAACAAAATTCAATGTACTGCTCATAAGGCT
TAACCGACAACTATATGGATGAAGTCACCGAATCTTCCCCCCAATTGAAAAGATACCGAA
ATTGACTCAAAGCCAGCAGATTTTGATTAATCTCAAACCGAAACAATATAAGAAGAGCAA
CGATTTTTTATTTTATTTTTTGAAAATACATAGAGCAACAATTAGGCACACAGTTTGTTA
TCACAGACCAATTAACTCACTAGGAGCTGTCCAAATGACTCAAGCAGGCCCTCCAATAGC
TGCCCAGACGACCAAAAAATTTCTCTGCTCCCCGGCTGTGCACCCCAGCAGGCGTCAAAA
CTCATCGGTGGACTTCCCAACTAAAAGCAGAAGGGGACAAGTAAATACCGGTTAGATGCC
TTCTCCATCTCTCCACAGAGTCGGCCAGCCTTCACAGTATGGAACTTGGTGGCCATGTTT
TGTTTTTGTAACGAAAACAGAACGGGTTCACAAACTAACAACCGATGAAGAAGCGAAATC
AAGGCACACAACAGCCATAAAACTGCAAAAACACATTTTTTGCGAACATACTGAATAATT
ATACAAGGCGTTCATTAGTTCTTAGCTTAGCCAGTACATAACATTGAACGTGACTGCCAG
TGCCGATAAAACTGCAGACACGCATTTCTCATTTCTCTTATAAAAGCCGCTGGACTCCTG
GCCAGGACGAAGCTATCCGCGTCGCCCCTATAGCCCTATGAATAGTGCTCTCGTGCCACC
GCCTGTCAATTCCTTACCCCGCCGGGGGTATTTTAGTAATTTCACGTACAGTGTATAAAC
TCACCCGCTCCCGTGGAGAAACCCGTCCCCCGCTCCCGCACTCTCCTCCCCCCTGGTGTC
CACTCTTCTCTTCCCCGCCCCCTCC