| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_130084
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_3355 |
4 |
1731 bp |
MLOC_3355.3 |
Available |
Available |
LOC_Os01g43080.1, FRAME:+3, EVALUE:2e-92, 13101.m04442 protein exonuclease, putative, expressed |
| MLOC_3356 |
8 |
3766 bp |
MLOC_3356.3 |
Available |
Available |
LOC_Os04g53850.1, FRAME:-2, EVALUE:9e-142, 13104.m05558 protein leucoanthocyanidin reductase, putative, expressed |
CDS Structure of MLOC_3355
CDS Structure of MLOC_3356
Contig Sequence (6472 bp)
>contig_130084 6472 assembly3_WGSMorex_rbca.fasta
CCAAACACTAGCAACACAAGAAGGGGAATGCAATGAATGCAAAAGAATGCCATGATGCAA
GATGATGACATGGAATGATGGCCACATGAAATGATAACCTCCTTATAACATCCATACATG
ATTCAACAATGTCTCCACAAATAAGGAAAGGAGTACAAATATGGAAAGGGAAACATTTGG
GCTGTTACAATTTGTCCTTTCATATCAGCCACGAGCTCACTTCTGCATTGATATTGATAG
GTTAGGTTGGATTGAGATAACTGAAATCAATCACCCTTTCCTCCTGGAAATCAATCAGTT
CATGCACATCTTTAACTAACTTGTCATAGTTGGCATCCATAGTATTCTTCTCTTCTGATA
GATGGTGAATAGTCACAACACTTTAGAGATTATGAGTCACCCTAGCATTCTTGGCATCTT
CAAACATTGCACAAAGCTTCAACAATGCATTTTGCACTATTACGGGCCACTCGTGATCAA
CCCATTAAACGAAACCATAATTATCACCTTCGTGCAAAAAGAGCAAAAAAGCTAGTGAGT
TCATAATATGGATAACAACATGTGCATCCCAAAATTAAAAGACTTGTGCCATTCAACAAA
ACCACAACATGATATGGAGTTTACTTAACAGCATTGGAGCTCTAAAATTATGTTTTTCTT
TGTTCAAAGGCAAGATTAATAGCAATTGGAGCTCCAAAATTATGTTGTTCTGAAATGCTA
TTAGAGCATAGGTACATCAATTACTCTAACAACAACTATAGATATCAAATTCTGCACTTT
TTGTACTGCAAGAAGAGCTCTAAAATTCTGCTATTCTTTGTTCAACAGCAAGATCCAACT
ACAAAATCATCCAACTACAAGAGCATATGAAAGTGGCATCAAGGACATTATCATTTCTTT
GCAGGAAACAAACAATATAACCGCCACTCTCAAGCACACAATCATGTACGTAATTACTAC
TTATCAACTAAGAAAGAAACTTACATGTTCTGCACATGCTAAGAACCTTCTTCCTGTGGT
TGTGCCTTCAAATGCAACATGCCTCTTCGATGCACTGTTGTGCTTATAATAGAACACCGT
TATATCAAGCTCAAGCCCATGGTAATGCGGGTCTTCAACTGAAACTGAAACCTGCACAAG
CTAATACACATCTCTCCACTTCCAAAGGATGAGGAACAAACCAAATCAAAAGAAATCCCC
AAATCAAAAGAAACTTAAACAAAAAAATCCCCAAAAATTATAACCCTAACCCTAGCTCGA
ATGAGCTCACCTGGTAAATCCCATCGGTGAAGAAGTTGAAGGAGTGCATGTACGGGAGGC
TCGACTGGTCGTCGCTGCTCTCGTCCTCGAAAACCATGGCGACGACGGATGCGCGGTACT
GCGGGCGTGTGGCGCTCGGGACCGTCGGCGAGGAGAGTGGTGGGGTGGGAAGGACTGGGG
AGTGGTCGGGTGGGGGATGAGGGGAGAGACCGGCCGGGGTAAGAGAGCGACCGCGTCGGG
CCCATCCTCGTCAGCGTGCGGGTACACGTCGATTGGCCACCGTGGCACCTGACGAGTGGG
CCTGACCGGTCAAATCGAGCGTCAATACTTATAAAGCACGGGTTTAGACTTATTTACAAC
GACTTCACACAAAGTTGATACTAACATGAAAAAGTAGAAATCTTGATAACAATTTCTACG
TTCTGCTTCAGTTGTGATACTTCTATGTTTAACTCGAAAATGGTCGAGAAGTAAATGAAC
CCGATGTGTGTGTGTGTGTGCGTGCGCGTGCGCGTGTGTGTGTGGGCGTGTGTATGCGTG
TGGGGAGGGGGGGGGGGGGCGTGGGCGTGTGCGTGTTTTGCTTATTTGAGATGACCTTAT
TTTGTACTCCTGAACACATATCGATCAAAGCGGAGGTACACATCAGTAGGGTAGAATCCC
CGTGGTTCGGCCGTACTCAACAAGGCCGTCAAAGATCTCACCCAGATCATTGTACTTGAA
CACAAACCCTTCCCCGATGAGCTTCTCAGACGACACACACACTCTCGGCTTCTCTGGGGA
CCCATCAAAGCTGCAAAAAACCATACTTGGATGTTGTTAAACCTACAAAAGAAAACATGC
ATCTGTATCGGATAGTTCAGCAGACAGAGTAGCATGCATACCGTTCGAGTTTCATATTGT
ACTGTGGGTACTTGTCCGCCATGAGACGAGCGAGTTGCAAGACGGTGGTGTTGTGACTGC
AGCAGAGGTATCTTCCCGAGGAGGACTCGTTCTCGGCGACGAACACCTCGGCACGACAGA
GGTCGTCGATGTGGCTTATGGGCACGCAGTCCGTGGTCGACTGCATGCCTATCATGATAT
CCATCAGTGCCTCATCCCCTGAAAAATGCATAGGACAGGCAGACACCATGCGTGTGACAA
CACCGGTGAGAAGAACATGGGGCATAAATGAGAGCTTACTTGCTGCATAGTAAAATAGAA
AGAGCACAGAAAAATCACCGGTCAACAGGGAGAGGGTGACAGGGACGCTGGACGTGGGCT
TGGTGACCGGCGCCGCGCCCAAGATGAACACCGGCAACATGGTGACAAGGCTAATGCCAT
TCTCCTCCGCGAATTTGCTTGCCGCCTTCTCAGCAAGCACCTTCGACACTGCGTATGCCT
GCGATGCGAATGTACACCGAACCAATGCCAACGTTTATGCCCATCGATAGGAAGCGTTCA
AGGCCCGAGAGACCGAACACAAAGGATTTTATGTACCCATGTTGATGGCTTGTTGGCCCT
GAGGTACTCGACGTCGGACCAGGAGCCCTCGTCGAGCACACGAACCTCGTCCGGCAGCGG
CCTCATGGAGACCGCAGAATCCGACGACGTCAGGATCACACGCTTCACCGTCCCGGCCCT
CACGCACGACCTCATCACGTTCAAGGTTCCTTGGACGGCGGCGTCGATCATGTCCCTCTG
CCGCCAAACAAGAAGCACAGTAAGTTAAGCCCGCTGGTTTGTTCGATCTGCTGGGTATCG
AAGGGGATTCAGGGGGTTAATCGAACAAGGAGTCAAGAGAAATAAACTAGTAGCATAATT
GGGTTGCCAAATGCTGCAATGCCAACATGATCCTGATCTCCCTGATCCCAAGACTTGTTG
TGTGGCTGAGAATAAATTGTCAGGGAGCGAGTGATGTCCTGACAACTTAATGTTAAATAG
TTTTCCAGTTCCCAACAACTCCCTCGTCATGCAGATGATCGAAACGAAGCTTGCTGCGGC
GGTGGAGCCGATCGAAAGATTATTGTTTACCTCAGGGTCTGCCGACCCGAAGTCCATCGG
GGCAGCGACGAGGAAGGCGTAGTCGCAGCCGGATACAGCCTCGTCAAAGCTGCCTTCTAC
GTCTAAGTGGGCACGGATGATCTCCAAGGGGCCAAGCGCTTGCAAGTCCTTGAGGTGGGA
GTTCTTCTCCCTGTCCTCTGCTTACAGATTGCAGAATATTTTGAGAAGTGAGAAAAAAGC
TGAACATGTTCTCTGAGGCTTGGCAAGCTTTCCTGCCCGACTTTACCAATCTCCCAAATC
CCAAATCATAATTGATAGACTAAAGGAGGAAGAACTTAGGATTTCACATGGAGCTCTGAA
GAGGAGATTTTTTTTCAAGTACAGACAAGGAAGAACTATAAATCTGGAAACAAGAAGCCA
ACCGGGGTCTCTGACCGTCGTCTTGACGGCGTACCCCTTCTCCAGCAGCGTCTTCACGAG
CGCTGAAGCGATGTAGCCGCTCCCTCCGGTGACGCACGCCGTCTTCCTTCCCTTGCCGGC
CGACATCGCTGCCACGGATCAGTTACGCCAAGGAGGACGATGGTGATCCCCTAGCTTCAA
GCGCAGAGGTTGTGAGGTCGTTCCTCTGGTGTGGTTGTTGGCACACTGACAGCAACAGGT
GCTGCATAGTAATAAACGATTATCCTCTACATTTTATATACAGATCTGAGATATCGTTCA
ATGCAACTTGTCTCGGTTGTGAGGCGTCTGCTTCTCTACAGCTCTTGATAAACGAAAGAG
CCAAATTAATAGGTATAGTTTGCATCCTGAAAAGGTCCTTTCTGTTAATTATTCAAATGA
ATCAGTAGAGAATGAAGTTTTATTAGCCCATTATACCTATCGTGCCTAGACTAAACTCCA
CCCGCTGCTCGCTTCCTGAGTTCATCCTCATCCTCCCATGCATCTCAGAGGATCGATCGG
GTCCATGCTCACCTCCAGCAGCTCCGGGGTGCCGTCACCGGACCCGGAGGCAACGACGGG
CAGCACGGCGCGGCAGCCCCAGCCCCAGCCCCAGGCGTTTGACTACTTCGTGGTCCTAGA
CTTCGAGGCGACGTGCGAGAAAGGCGCGCAGATCTACCCGCAGGAGATCATCGAGTTCCC
CTCCGTCCTCGTCGACGGTGCCACCGGCAACCTCGACTCCGAGTTCCGCACCTACGTCCG
CCCGCAGCACCACCCGGCGCTGACCGACTTCTGCAGGGACCTCACCGGCATCCAGCAGGC
GGACGTCGACGGCGGCGTGGAGCTGGCCGAGGCGCTCCGCATGCACGCCGCGTGGCTGCA
GGCCTCGGCATGGGCCAGGAGCGGCGGCTGCTTCGCCGTCGTCACGTGGGGGGACTGGGA
CCTCCGCACCATGCTGGAGACGGAGTGCCGCTTCAAGGGGCTCGCCAAGCCTCCCTGCTT
CAACCACTGGATCAACCTCAAGATCCCCTTCGCGACGGCGCTGGGCGGCGGCCGGCGGGC
CGGTCTGCGGTGGGCCGTCCGGGCAGCGGGGCTGGAGTGGGAGGGCCGCCCGCACTGCGG
GCTCGACGACGCCCGTAACACGGCGCGGCTTCTCGTGGAGCTCATGCGGCGCGGCGTCCA
GCTCAGCATTACGAGCTCCCTGCAGGCCCCGTCGCCTCAGCTAACTCCATGCGGTGGCGC
CGGTGCCGCCGCAGCGTGCTACTGCTACTGCGGGGTGGCGAGCAGAGGTGGCGTGGTGGC
GGTGCCGGGGCCAATGCAGGGGAGTTGCTTCCACGGTTGCGGAAACTGGACGCCGTCCAT
GGGAGCAGTGTGCTCCTACTTCATGTGGTCAGATTGCTAAGCCAATCCATGGGTTTGGAT
TTGGAGAATACGCTATTGATGGTACAGTAAATTGTACATGTGCGAGTATATATGACTCCA
GCTCCTTGATTTTCTTATCAACTTAAATGCTATTGCGTGGTGTATTTGATTTCCTCATGA
ACTTGAAATTCTACACATGTTTTGCTTGAACCGATTCATTTCTTAAACCATGGAAGAAAA
TTGCATGTTCCACTACTAGAATTTGGTTTTGCGCCGAGTTCTGATATTTTGCGGAGCACA
TTTCACCGGGAGCTCGGCAAACTTTTGCATGTGCCTTGTTTGATTCAAACTTACCCTCGG
CAGTGAGAAGAAACTCGACGGATTTGCTACTCAATAAAACGCTAGAAATAGCCGAAAGCA
AACATGGACACTATCACAACAATGAATTAAGTTAGCCAATAGACGGGCGTGGCGTGCCAC
CGCGCGTCGGGCTGCTAGTTATAAACATGCTTTCTGCCCGTATCATTAACAATGATACTT
CTATTGAAAGACTCCTTCACACCAAACCACGCTACACCTTTCTCCGTGTTTTTGATTGCG
GTTGTTGGCCAAATCTTCGTCCCTCCAATAAACGCAAGCTCATGTTTCACTCAATACAAT
GTATGTTTCTTGGGTATAGTGCTCATCATAAGGTTGTCAAATGTTTTGATGTTGCCACTG
GTCGAGTTTACATGTCCCGCGATGTTGTATTCGATGAGACGAAATTTCCCTTTGCCGACC
TCCATCCCAACGTTGGTGCCATGCTTCGCAAAGAGATCCTTCTCTTGCCACCTCATTTGG
TTAGTCATGACCAAGAGGGAACTGATAACTGCAATGATCATATCACTACTACAAAAACAA
TTATTAACGACCATAGGAAAAAACACATGGTCGTTGAAAATCTGGGTGAACTCCCGCACG
GTGGGAACCAATCTATCAGATACTTTTAACAACCATCGGAGTACCCGTTGCTAAAGAAAT
CATAGGTGCGGTCGTTATTATTTTGTTTTCTGTTTGTTCGTAGATCGTAGAACACCCTAT
AACAAACTTAATCTGATCTCTCTTCTCTCTCCTTTGCAACATGTACTTTCCACATGTTAT
GCCGCAAAGTGCTGGTACTTTCCATTGAATAACCCTGCATATATCTCCCTGCCTCCTTTT
CCTCTTATCCTCAACACCCCGATTGATCTCATCTCCTTGTTGTTCTCCTACGCGCATGAC
CACAACGCGTCGCCCAGCAGCTAGCACCTTGTCGGCCGCCTCTGACCACGACGCGCATGC
CCTGCAGCCAGCACCTCGTCGGTCGCCTCGACGTCGGCGCGCCCGCTCTACAACCCGCAC
ATCGTCAGTGTCCACCACCAACGCCATCGCTAGTGGGGACGGGGCCTTTAGC
