Contig Data
morexGenes
Links



Map Locations of contig_129575 (4001 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_129575

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3305 4 754 bp MLOC_3305.2 Not available Available None
MLOC_3307 1 462 bp MLOC_3307.1 Available Available None
MLOC_3306 2 687 bp None Available Available None





CDS Structure of MLOC_3305






CDS Structure of MLOC_3307






CDS Structure of MLOC_3306






Contig Sequence (4001 bp)

>contig_129575 4001 assembly3_WGSMorex_rbca.fasta
ACTGACTGTCTGACTCCACTAAGCCTTTGTATACTGACTTTCAGTATCCCAATCATCCCT
TTGTTGTAGTCTAGGAGTAGACGGATTCACATCTTCAGAGACTGACAACACTACATTTGT
TGCTCCAGGAATCCGAGACTTTGGTCTGTCGCCCATTCACATGATACATGGTATAGAAAA
AAATGGTGTTCACATACACAAGAGAGATTTAGACGGCATGGAAAATAAAGGCAGCAAGTT
TCACAGAATTGGTTGTTCTCGCAAGTTTGTTTGTTCAGTACATTCATGTGAAACTTATAT
TAATAAACTTATTAATGACATGCAGTGCAGAACTGTGGAATAATAAATCTAAAAGGAAAA
TAATTTGGCATGTTACGATATTTGTCACAACTGGGCTGAAAATGAGCCATTATTTGCAGT
TCCGTGAGCATCTAAGCAAATTAAGTTACTACTGTCAGACTGTATCTCTGAATAACAGTG
AGTAGCTGATGTATTCATGTTGATCACTTAATCGGACCTACCTTTGTGGCCAATTAGGTC
GTGAGTTGGATCCATGATAGCTTCACCAGCATGCATTTCATCGGTTACCACTTCAATCAC
CTCTTTCTTGAAGATTTCTGCATGCAATGTTTCTACTCTCTAGAAACACTCTATTTTAGT
ACGGGTGTCAGGTGGATTGACAAGTCCCTTCGTAGAAATTTAATGGCGAATAAACCTGAA
TGTGACAGTAGGTCTTAGCACACTTGAAGAATTTTCAAGCATCATCAGGAGCATTTTAAG
TCAAATTCATGGTCAGGATATAAGATGTCTAAAATAATACACTTTTCCAAAATATTGCCA
GACGCCTTGTTGTGGGAACTCTTGTTACAGATTGAAGAAATTAATGTTGAAGCAATAATG
AGAGCTTTTCTAACCTGAGAAGCCCTTCAACATCAGAAGGGGCCTCGCAGTATGAGGGGC
ATCAAGAGGGAGTGGCCCATTTTTTGATTAATTTGTGCTACATAGCTGTCACATGAGGGG
GAGAGAGATGTAATAGAAACTGAATGAAAGTAGCAAATGAGCATGATGCGGGCTCTTGCA
TTTTATTAGAATCTGGGTTAGTGCATAAAATGGTCAACCGTAGAGATAGTAGTGCAATCC
GAGTCTCTCAGATAGTAGCGGTGAAAGCTGACTACTTAGATAATCCTACTTGCCACCACA
TCCTTATATAAGCTAGTGTTACAAAAAATGGCAAATCAGAGCTAACAAAGGGCATACTCG
ATCATAATGTAGTGCCACTTTCTATATCCCCTCGCTCATAGTTATTAAAAGGCTTTCGAC
AGTTGATCCTGGCTCCACTTTTACTCTAGCTTATCATTGTCGAACAATACAAGACTTTTA
TATGCAGGTGGTTCTTGCCTACTTTCATAGTTTTGTATATCTAAATGCCTAAATCTACCA
CGACACGGTCAACAAACAGAATTTGCAAGTATTATTCTACAGTTAGTTAGCACATGGTTT
TCAATAAAAAATGCAGGCAACAGTGCAATTAGGATCTAATTCAGGCAGGTAGTGAGAAGA
TTTCCATAGCAAATTGAACAAGTAGCAGGAAGAAACAAACAAAATGTAAATAAAGAATAG
CTAACCTTCAGTACATGATTTTCCTAAGAAGGAAAGCGAGATGAACACAATATGTATACT
CAGTATCCTAGCCTCAACCTAACATTAAAACAAAAAACACATTGGAGTCACAAATCAACT
ATTGTAGCAAGCCATGAATCCAACATTTGAATGATCTGTCAAGGATAACAACAATAACAA
CAACAACATACATTAGAGTCACACACTCACACACCACAAACTGATACATAGGGCTAATTA
GTTTATTCAATCCAACACACTCAAGTAAGTATAAAAAAAATCTACTTCTCGGATAGTAGT
GTCATACAACAAACTTCCGAATTTGGTACATCTCTGATATCAGGACATTCTCATAACATA
ATATCGGTTTCGGTCTCATTATTCATGGATGAACACTTGTATAGCATTGATGGTTAGTAT
AACATTGAGTACCTGCCAGATAATAGTGTCGTAGAACAAATAGATGGCATCTTTCCAATC
ACATGTATGAGTAAATTAGTTGAGAGATACAGTGTGTTGCTTGCTATCAAAAAAAAGGGA
AACCATATAGCATACAGTCAATTGCTTTCTCTGAAACACAAGGGAAACCAAAATAAAATC
ACTCTCAAAGCTTTACTACTTGAATAATCTTGAGAACATTAGGAGCCTTTAATGTGAAGA
TCCTTCGTAAGGGCCACTAAAACATACAAAGATCATCAGCATCATCTAGTACATGTGCAA
AACATTCTCATATGAAAGTACTCTATATCTTACCTGCTGCATTTCTTCAATGCAGTAATT
GGTCCACCTTTATCAACATCAATTGTATCGAATTGGTACTTCAGATCCGGTAGATTGTCC
TCATTGATTGTACTTGTTAATGCTTGAACAGGCAATGATGCAATACTACAAGAAATCAAA
TATAAGTATGAATCATAAACTGGATAAACATAAATTGTCTTGTCAATACCGAATCATAAA
CCGGAAAAACATAAATTGTCTCGTGTATGTGTATGAATCATAAACTGGATAAACATAAAT
TGTCTTGTGAGTACTGAAACATCAAATTGTCTTGGGTATGTGTATAGTACCTCACCATTC
ACCATGAATGATAGGGAGAGGTTTGGGCCTCCGGCAAGCCTTGGCTTGGTTGACCCATGA
CACCCGGGCGACGCACAGAGGAAGGTAACAGAATTGATAGGAGAGAATAGGGTTTGGTCA
GCTCACTGGGGACCAGCAACACGCCCGGATACCACCTAGCCTACTCCCTGTTTTGCAATT
TCAAGATAATAGTAATATACTATGTACTGCACAAACTGCCCAAAAGGTGATATTTAGGTC
TGACCGCCTTGAGATAAAGAATGATGTTAGCCGAGTTATAGCTACGTTTTTATTTCATGC
CACAAGCGGTATTTGTTCACAAGGTGTTGCAGGAAAATTACCTTTAGTTTCTACAAAAAG
ACAGGGGACTCCTTTTACAAAAAAAACTGAGTAAATGTGTTGCACATAATTCAAAGAAAA
CAAAATAATTGGTCAATCCATATGATTTTGATCATCCCCGATTTAAGTTAATCAGTTCTT
TATCACGTTAAAATACAATGTGGACACTAGGATTCAGTGAAATCCTTTGGCAACTGAAAC
ATGAACGAGACAGAGCGTCTTCTCGGGTGGCTAGCTAGAGCGGGCTGAAGTGCCCGCAGC
CCGCCGACCCGTGTTCGAGGCTCAACCTCCGAAGGGTTAGTGCTTGTCTTTCTTTTTAAA
AAGAATGCCACAAAAGGCTACTCCTGGTTGATCGAGTTTTTTTTATGGTGAATCATTAGC
CGTCACATCTGATACCAGAATTCATTTAAAACTACTGGGACCACTTCAGGCAAGCGAAAA
ATTCTAAAAAAAATGCAACACATGCCATCCAAATTTGTGCCATAAATGGAATTTTTTTCC
CACACTCCATGTTAATGTTTTGGGTATTGAGAAAACATAGTAATATTTGAAATCATGCAA
ACTTCAGAAGAAGTTGCAAACAAAAGAAAAATAAGAAATAAGTGGCAGCTTCGGAAGGTC
CAGTTTCAGGTGTAAACATACATAATGTGAACAGGTTTTCTTATGTTTTTTTATACAATG
CCAGAGTTCCCCAAATTGTGCGACATCCCTAGAACTCAGAACAACATATGCAAACAGATT
CCTCAGGACCTTTGCCTTTATGGCCTTGGAAAAAATTAGCTGTATCTTTAGTAATCAATG
AAATCCTTAATGGTGCCTGGTACGGTGAATGATGGCATCCGCTATAGTGAACCATGGACA
AGACCGAGCGTCTGCTTGGGTGGTTGTTAGAGCAGGCTGAAGTGCCCGCAGCCTGGCAAC
CCGCGTTCGAGGTTAAGCCTCCGCAAGGTTTGGTGCTCACC