Contig Data
morexGenes
Links



Map Locations of contig_129549 (2593 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_129549

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3298 1 1112 bp MLOC_3298.1 Available Available LOC_Os02g54160.2, FRAME:+3, EVALUE:1e-76, 13102.m12340 protein AP2 domain containing protein, expressed





CDS Structure of MLOC_3298






Contig Sequence (2593 bp)

>contig_129549 2593 assembly3_WGSMorex_rbca.fasta
ATTAACTTGTGATCTTTATTTTATTTGATTTTTTTTCTGGTGACTTATGCATTCGCTCGA
ACTTGACACATCATGGTTTAGTGTTCATTACAATCATTATATTTTACATAGAAATTTATG
ACAAAATATTTACTATATGTGAGAGAAATTTATCTGTGTTGGTCCCTCTTAGCATTGCCA
TTCATCTTCCATTGCAGATGACTTAAGCACCATGCATACTGCTGATTTTGATGGTCCTTC
AGAAATGCCAAAAAGAAGAAAGAGAAAAAACCAATTCCAGGGTATCCGTCTATGCCCCTT
CGGTAAGTGGGCTGCTGAAATCACACATCCTACCGAGGATGTACATGCTTGGCTCGGTAC
TTTCAATAGTGCTGAAGAAGCTGCAAGAGGTTATTATGTTGAAGCACGGATGATACATGG
AAAGAAGGCCAAGGTTAACTTTACAAAGAAACCAACAAGATCAGCTGACTTCGCATCAAA
CCAACCACTTGTTCCCGCAATGAACTCAGTTGCCCCTGTTGAAGCTCCTGTTATGGATAT
GTACTGTGACCAGGGAAGCAACTCTTTTGGCTCCTCTGACTTGGGCTGGGAGTATGACGC
CAAAACTCCAGATATATCATCCATTGCTCCCACTTCTACCATTGCTGAAGGAGCAGAATC
TGCGCCCCTCAAGAACAATACCTACAACTCTATGGTTCCTCATGTTATGGAGAATAATGC
TGTCAATTTTCGACCTTGGATGAGATATCTTCTGGATGACAGCGTGGATAAGCTGATTGA
TAGCCTTCTGAATTTTGGCATGCCCTAGGATACCATTGTCAACATGGACCTTTGGGGCTT
CGATGACATGCCCATCGGTGATGAATTTTTCTGAGGGATTCAAACCCTGTATACACTGAC
AAAGAGTAAGCATTTGCACAATTTCATGTTCACTCTGAGGTTTACAGTCTTTTCATTACT
CAGTTTATGCTGTTGTTTCAGGAATAAAACTACGGGAGATCAGGAAGCGCCCTATTGTCA
CCTTCGGCTAGTGTGCTCATGTCGAAGCTTAGATGCAAAAAATAGTTGCATCCCGTGTCT
CTTTTGTAATCGAACCTTTCCCTAGTTGACTGTCTGTGTGGAAGGCATTTATGCTGAACA
ATTGTCTTTATGTTTTGTGAACTTTTATGTCGTCATTACCATTTGTGAATGTGAACAACA
TAGCACCTCGGTGCTTGGGAACCTAGCTGGTTCTTTATTAATGCATCATGGATTCAAACC
CATTAAGTTTTGCATGCAAGATTTTCCATATGTGATACTAGCATGCATGCATTTGTTTCC
ATCCATGCATTATCGTCATTTAATTATTTTCAAAATAAAAATATACAATTTAATAGAGAC
GACATGCTTGATATACCCAATGTACGGTAGATGGAAATGTTATACCAAAGAAATATACAT
CCCAAAAATGATATACCGAAGGTATGTTAAAGAGAAATGTTATACAAATGTAATATTTCC
CCCAAAAATGATATACACCAAGATGATAGTTAAAGTTTGACATACTCAAAAATCACATAT
CCAAAACGGATATACCCAAGAAATATTTGTGAGTATGGAACGTATTTCCATTGTACGTAC
ACATGACATTATACACGCGTATATGATAATTTCAAACTTCATTAAATGGTTTACATATCA
ATCTTTATATATTTTAAATATGGCAACAACTCATTTTTTGCGGTATATTATTGCTAGGTA
TGTCACATGTCATGGGTATATATTTTCTGGAATATGGTTTATGGGTATGTAACAATTATT
TACTTTTATAATGTAAACTCCATTGGATATGGCATACCCACAACATTTAATAAAGTGGCA
AAAGAACACATTGCATTTTTGTACAATAGATTTTTAAAGCGAAAAAAGGACGCATTGCAT
TTGATAAGATACGTTTTAGGATCTGACAATAAAAGTAAGAAAATGTTTCAGCCATGATGC
AACTACGAATTATTCTCCTTCAACATATTAATATCATTTGTATAAATTAGAGAATATTAA
AAAACATGCATCCCACATAACAGCGCCATATACCTCCTTCAACACATTAGTACCATTTAT
TTAAATATCTCCATATACCTAAGAAGAGGAATGTATACAAATCATGAAGCATTTATTTTT
GATTTCTCTCTCTCCTATTTCTATTAATGACTCAAATATTTAACGTTGCCATGCATGTTA
TTCTCTTTCATTTTTTCTACTACAGAATTTTTCCATGCTTGACGGACATGGGCCTTATTT
ATGGTATCCAATTAGTGATTAATGCATTAATCTACATATCCGTTCTAATAACACACATCT
TAATGCAATCAGATGGTGGAAAGAAAAGGAGCATGGGCATCTAGGTGCCCCAAACGGTCG
TCATGTATATATATATATATATATATTACCACCGAGGAGTAGTTACTCCACATGTTCCAT
ATATTATCACGCGGTACCATATATACTAATTTATTATTTTAATTATGTTCATATACTATA
TATAAGATTTTTGAAATTGAGTTACATGAAAAAAATTACAAGTTGATCCACAATTTTTAT
TATATTTATGAAA