| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
 |
Predicted Genes from contig_128231
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_3156 |
4 |
1832 bp |
MLOC_3156.1 |
Available |
Available |
LOC_Os02g43340.2, FRAME:-2, EVALUE:0.0, 13102.m04813 protein hydrolase, alpha/beta fold family domain containing protein, expressed |
CDS Structure of MLOC_3156
Contig Sequence (10412 bp)
>contig_128231 10412 assembly3_WGSMorex_rbca.fasta
TGGGCACGGAGTCTTACTCAATCTTGTACCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAACCTCTTCAAAACTTTATCAAGGAGGAACCATAGCCGGAAAGCCTC
TTCATACATCTGTGAGAGACTCGATCGCGCCATTGCAAACAACGACTGGTGTGAGGCGTT
TCCACATGCGTTGGTGCGGCATGGGGACCCAGGACACTCGGATCACCGCCCCATCATAGT
CTCCCTGGAGGGGGCGGATCGTGAATGGAGGAGGAGCGACCATAACTTCTGCTTTGAAGC
ACGGTGGCTGCAGGAGGATGGATGTGAGGAGGTTATCCGGAAAGCCTGGGATCGGGGATT
CCATGAGGAGAAACGGGGTGTTGCCCGGGCCCTAATGAGTGTGGCGGGAGACATGACCAA
TTGGAGTAGAGAAGTTGTAGGGGAGAATCAAGGAGACCCGGGCAAGATTAGACAGATGCA
TGAAATCTACTACAACTGAAGCGAAGGTGCAGGAGGAAACCCGTCTGCGTATTGCTCTGG
CGTCCCTGAAGGAGAAGAAATACATCAAACTGAAACAGCGTGCCCACATGTGGTGGTTGA
GAGGAGGGAACAAGAACATAAAATACTTGCAATCAGTAGCATCTGCGAGGAAGAGAGCAA
ACAAACTGAAGGAGATTTGTCGGGAGGATGGCTCGGTGGTGGAGGAGGGACCAGCCTTAA
CTAACTATGTTTGCTCTTTTTTCCAGGGACTATTCACTACAGCCAACCCACATCGTCTCA
ACGAGCTGCTACAGAGGGTGAATCCGCGAGTCTCTCCTGCTATGAATGATGTGCTTACGG
CTGAGTACACCAGGGAGGAGGTGAAAGCCGCATTGGACCATATCGGTGACCTAAAATCAC
CGGGCCCGGATGGTATGCCGGCGATTATGTTCAAACGACACTGGCATTTCATGGGTGATC
ATGTGGTGAAGGAAGTTCTTAAGGTCCTGAATGGAGATACCTTCCCGGAGGGCTGGAATA
GTACCACCATTGTGCTAATCCCTAAAGTCAAGAACCCGAGGAGGATTAAGGATCTCCGAC
CAATCAGCCTCTGCAATGTTGTATATAAACTGGTATCCAAGGTCATTGCTAATAGACTTA
AGCTTGTACTCCCACAGGTGATCTCCGAGAACCAAAGTGCAATCGTCCCTGGGAGGCTGA
TCACTGACAATGTGCAGATAGCCTATGAGGTTTCCCACTATCTGATGAACAAGAGGAACG
GGACAAGTGGGGTGGCGGCCGTGAAAGCAGATATGAGCAAGGCGTATGACCGAGTGGAGT
GGAGCTTTTTGGAGGCCATGCTTGCCAAGCTGGGTTTCAGCAACGCTTGGATCGCACTTG
TCATGAAATGTGTCACCACTGTGAGCTATCAGATTAAGGTTAATGGCACTTTCACACAGC
AATTTTGCCCATCGCGCAGACTTAGACAGGGGGACCCCCTTTCCCCCTACCTCTCCGTCA
TCTGTGCGGAAGGGCTATCGGCATTACTCCACCATGCGGAGGAAAGAGGTGTTCTCCACG
GCATGAAAATCTGTCCTAGGGCTCCTTGCGTCTCACACCTGTTGTTCGCCGACGACTCCA
TGCTCCTAATCCGAGCACAACAGCAGGAAGCAACAGCCCTCCACAACATCCTGCAGCTAT
ATGAAGCATGTTCGGGGCAGTGCATCAACACAGAGAAGTCGGCGATTATGTTTAGCCCCA
ATACTCAAGACCAGGACAGAATCGCTATGAAGGATGCGCTGGCGATACGAAGCGAGGACT
GGAATGACAAATACCTGGGCCTGCCTGTCCACGTTGGGCGATCACGGAAGCAAGCATTCA
GATATCTTAAATGGAACATGTGTGGACGAGTCTACGGGTGGCAGGAGAAACTACTTGCCA
AGGAAAGCAAGGAAATCCTGGTGAAAGCGGTTGGACAGGCTATTCCCACATACGCAATGT
CATGTTTTGACCTGACTAAATCATTCTGTGCGGAGTTGAATGCCTTGCTTGGGAAATTCT
GGTGGAGTCAACAGGACAAGAACAACTCGCTGCATTGGCTGAGTTGGGAGAAACTCACTC
TCCCCAAAGCTATGGGGGGTCTTGGATTCAAAGATATGCATACCTTCAACTTGGCGATGC
TATCCCGGCAGGGGTGGAGAATCATTCAAAACCCGGACAACCTTTGTGCTAGAATACTAA
AAGCCCGGTATTTCCCTTACTGCTCAGCACTAGAGGCAGTGGCTCACGACGGCATATCAT
ACTCCTGGCGCAGCATTCTCCGAGGACTCGACGTGGTGAAACAAGGCTACATATGGCGGG
TTGGGGATGGCACAAGCATAAACATCTGGCGCGACCCTTGGATTCCCCGACCATGGTCGA
GGCGCATTATAACGCCGAGGGGCGCGAGCCTCCTAACGCAGGTGCAGGAACTGATGTGCC
CTATCACAGGAGGCTGGGACGAGCAACTGGTACGGGAGACGTTCTATGCGGATGATGCCC
GTTACATACTGCAAATACCACTACGGGAGGGAGTGGAAGATTTTATTGCGTGGCACTTTG
ATTCAAAAGGGGTACACTCTGTCAAGAGCGCATACAAATTACTGGCTCAACTAAACAATA
ATCAGCGTGGTGGATCGCCAGGTTCAAGCGCAACGGGAGCTGGTCGTCTCGATGCATGCC
CAGACCAATCGTGGAAGCGAATTTGGAAAATACCATGCCCCGCTAAGCTTCAGATGTTTG
TGTGGCGCCTTCGACATGAGTCCCTAGCCCTATGTACTAACCTGGCGCGACGAGGCATGG
CGCTGGAGGCTATGACTTGCTTCGTTTGTGGCAAAGGAGTTGAGGACGGCGGCCATCTAT
TCATCAAATGCAAGGCAGCCAAGAAAGTCTGGAGATTGCTCGGGCTGGAGCAGGAACGCT
GTAGGCTCGAACCGATCGAGGGCGTGCATGCAATGTTAGACTCTCTATGGGGGCTAGAAG
AGAAGAAACGGGTTCTGATCATCACCTTTTGGTGGCACTGGTGGAATCACCGGGAGGGGG
AATCTTCCGTGCAGGCGGACGAGATCGCGAGGCGAACCCGGAGTGATGCCCTCGAGTATG
AGCAGATCCTTGTCACTGGGATGCGTAACCGTGTACCAAACCGATGGGAGCCACCCCAGG
AGGAGTTCATCAAATTCAATTTAGATGAAGCCTTCACGCCGGGCAACCTGTTCAGTGGAT
GGGGAATCGCGGCTCGCGACTGCTCCAGCCGGCTCCTTCTCGCACGGGCTGGGAGACAAG
AGCATGTTTCCTGCACCTTTGGTGCTGAGCTACATGCACTGTCGGCAGCTGTTGCGACTG
CACCTAAGATGGGCGCGACCAGAGTGGTGTTTGAGACAGATTCACAGCTGCTCGCGGAGG
CTATGGGCACTTCCCGCACCGACACATCACCCTACACAGCAATCATCGAGGACCTCAAGT
ACCAGCTAAAGCTATGGTTCACCCATTGGAGTGTCATAACATGTAATCGTAGCTCATCGA
GGACCTCAAGTACCAGCTAAAGCTATGGTTCACCCATTGGAGTGTCATAACATGTAATCG
TAGCTCAAACATGGTAGCTCATGCACTAGCACAAATTGGTAGCACCTGTGCCGTTGAGAA
TTGTGTCGAATGGGACTCAGTTGTACCGCCCGATGTGGCGAATCACGTGTCAGGTGAGAT
GCCTGTACGTAGTTGATTTATAAAGCTATGCTTTCCCTAAAAAAAACTCCTGTACAACCA
AACAATAACGACAGGTCCGGCCTACTGACTGTGATGTTATGACGATGGATCAGCTAAAGT
TCCTTTACGAATTGAGATGACTGAAGCTATCGCTGAAAACCACGACTCCAAACTCGTGCT
CTGGTTTTGGCACATTCCAGAATTCTACAGTTCAAGTGTTCAACACTTTTGTGGGCGTGA
TGGATTGGATGAAGCGACTGCCTCTACATTTCCAAGGGATTGGTATGAGAAGTTGAGAAC
ACATACAAGACGGAGTGCTGGATGAATGCGGTTGAAATACTCTATACAACACGAACACGG
TATAGTTTGATACAGCCTGCCTCCAAATGGCAAATAAATGCTTCGAGTCAAAGTTTCAGT
CAAATGTGGAGCCAGCAATGAATTACGGACGCCAATAAATTTTCAAGATGTTGAGAACCT
GCACCGAGTAAAGTATGCAGGAGTAAGAAAATTAGATAATACTACTAGTGAACGAATAAA
AAATGTTTACCAAGTAAAAAAAGCGAAAGTGTGTACTATACTAAGGAACCAAGCAGAGGG
TATACCTTTGTGTTGATGGAGCAAATGTAGCACATTTCCGCTGCAGAACAACAATTGAAG
CCTAACTATGTGTATAAAACGCGTGCATCGAATGGAAACGCAATGTTACTATCTCTACAC
ATGCTCGGACAAGTGCGGTACTGATGTCTGTGGAACACCCTGCGGCTCACTGAACACAGT
ATTCTTGGTGGTTGAGCCCGTTTCATTATGAACATGTTCTAGAAACTCCATGACAATAGG
GTCAGTCCAAGGACATCCAAAAGGAGCTTCATTGCCTGCTACCCATCCAAGATGACCACC
CTCTGGTGTTACTATCAGTAGGCAGTTCGGATTTGCCTGAGATGGTAAAAGAACAAGACC
AAATGAAGTGTAGAAGAACCAAACCATAGATTCATGAGTTAGAGGTGTGTGCTGAAATAA
GGAAATACCTTGATATCTTCTCTAGGAATTCCCCTGGATGGTGCAATTGGATCGTTATCC
GCCTGCACATAATTAAGCTAGCATTAGAGTTATAATAGAAAAGAGCAAACCGTACCATAC
CAACATATCCATGTCTGACATTATTTTCTTGCTGACTTAACATGAATAGGTGGTGGCACT
TTAAGACAAGCTATTGAAATCGGCATGTTCATTAAAGTACAAAACAGATGTCCTTTTGGG
AGATCGTTTCAGTTTTTCTCATGTGGAAACTCGGGTAAACATGTGCCCCTCATTATAAAA
CACTGCCTTTAGTTTTGTCTTAACAGAGGACTGAGCGTCAGTCAGTTGGCTAGTGGTCTG
TGCACTCGCACAGCCCACCCAGGTTCAACCGTTTGAGGCCTGGCCTTCCCCTATGGTGCT
CGGTTGTTTCCTCTAAATAAAAATTCCATGGCTACTAATGCCTGCTGATGAGTTCTTTTT
CATCTTCATGAATTGTAAACACTCCTGCCGATTATTCAGAAGAAAAGGGAGTGCACAGCA
GATGGTAGTAATTCAAATTTACTGTGCAGTTCATGAATCTCAGCCTGGCCTCCCCCTGTG
GTGCTCAGTTGTTTCTTCTAAATAAAAATGCTACAGGCGGCTAGTGCCTGTTGATTGAGT
TTTTTCGTCTTAATGAATCGGCAGCACTCCTGCCAATTACTCGGGAAAAACGTACAAAAC
AGATGGTAGCAATTAAAAATTACTGTGCAGTCCATGAATGTGAACTAAGTTTTCCTGTTT
TCCGTGTTTGCTTAGTGCATGACGAATATGCATTTACAAGTATCGACTAGAAGCGACATA
TGCAACTTGAGCCATCTAGAATTATCGTTGCAGCTCCCACACAACTTACGTATGAACTCT
GATCAATTTAAGCTTCCATTTCAAGAGAATGGCAAGCATTCAAATGTCTCCGGCTTTTAT
TTCGATTTTAAGACCCGCCATGAATTATCGTGCATTGTAGTATTCCTATTTCACCATTTT
AAAAACTTCAAGTAAATCATAGTTCTAACTTCTAAGTATGACATAATGGTGTAATCTTAA
ACTAAGTAATCAGATAGCTGTTGTTTCCAAATCCGCTAACGCAGCATAGAGAACTGGTAG
CTTCACCTGTATGCACAATAAGGGTATGGAAACATTCTTGATGGAATCTGAGCTGCTTGA
GTTGCTGTAGTAATCATCTACTGACCTGAAACCAAATGAAACTGCAGACAATCGAAGTAT
CTTTAAGTGTAGGGTCAAATGGAAATAGGCTAAAAAAATAAATTCAGCTTGAGTTCAATT
CAAACCTCGGGTTAGGCCTTCATCAAAATCTCTAACAGTTTTTGCATTGGCTGCCTTTGG
TATGTCATATTCACCATCCAATCCTTCAAAAAGAAGTGCATGCCTAAAATTTGATGAAGT
TCCTAAAAAGCAGCTGTTAGAAAAGGAGTGTGAATATTACTTAGATTGCAGGAGAGGTGA
ACAAAAGGTTTACTTCTTAAATATAGCCCTCAGAGAATTAGCAAGTGCTCTATCATAGAC
GTTGTTGAACCCTTTGTGGAAATCTTCATCTGCTATTACCAAATTAAACGGATTGCACAT
GGACACTGCTCCAGAAAGAGAGCATTTATCAGTCTCCTGGAAAAAAAATGAGTTAAGTGA
TGGACAGTTAAAGGAAACAGACCTCTGAAAGCAATTTTATATAGGGATAAAAAGGAGCCG
GTACAAAGCTAAGCACTTTGATTAACATTGATGGTCACAAAGAAAAGTGACAAAAATTGT
CATAGGTGGATTAATTAAGCATCACTTGATACAAAAGGACTTTTAAGTAAAGCATATACT
TTAATGAATATGACAATGTGGGAGGTAAAAAATGTTCTGACATTGTGTAAAACTGTAAAC
TTCTTAATAACTGAATACAGAGCTCACCTCGCCAAGGTAGCGCACAAGAATATTTGCTCC
AAGAGACCAGCCAGCAGCATAGATATTAGATTGAGGGTAACGGGATAAAACATGATCAAC
TACTTGACGGAGATCTCCAGTAAATGAAGCAGAATAGAACTGTGCATGAAAGAAGATAAG
AATCAATAGATTAGAAAGTAAGATGTTATTGTATAGTTTCTGCTAATTTGTTTTTGGAGC
AGCTATCTTCTTCAATCTTTATATTTCTCTGCTTGGTTATGTTAAGGACACTATTGCTTC
CTAGATCTCCGCCACAAGATTCATACACGGATCACTGAGTACCAAGACCTATGCTAATGA
TCAGAAAAAATGGTGTCCACACTCAACAGACAATATTTCAATATGCCTGTACTAAAGATT
AGGTCAGCTATCCTAAGAGATGCTAATAAGTTTAAGGATACAAGATATACTATTTCTATG
GGTAAAAAGATGAAAAACAGATGCATGCAAACCTAATAGTCTATTTAACTTAAGCCATTG
TCTGACTACCAAGTATAGCCTCAAGAACTGGACAATATTTGTCATGAGATTCATGCCAAT
CAGCAGGTTTTGTGGGTCATATAGTACCACAATCGCCCATATCACACTGCTAAGAAAAGC
TCAAACAAACTAGCAAGTACGGAAGTGCAAGCTGCATTATCACACTGGATGCAAATTAAC
ATAAGATTTCTTTCCGTACGACTTGCCACTATCTCTATTTCTGGTGTTTGTTGCAGGAAA
GAAAATGGAGAAAACAAAGGCGCGCTGCAGGCAGTGAGAGAATGGCAGCTACGAGTAAAA
GGAATAGTAGGACTGGTGTGTTGTTTTCTTTTGAGCGGCACATTTACATGTTTATTCTAC
TTCCTTGGCTTATGTGAATTGTTTGGACGATAGTCGAGAGGCTTGATATATTGATGCAAA
ATAACTGGTAGTACAATTTATCTTTTGCTTGCAAATGTTAGTTAATTGATTAGGAGTTAT
GTTGTGTACTAGGGCTAGGGAAAGGCTCTCACCCCTGTGGGCAAGATAGAAGGACTATTC
TTCTAATTCTTGTTTGCTTTATTCCACATACAGGGTCCTATTAGGTTCAAGCTAAAAGAT
ACTCCCTTCGTTCCAAAATACTTGTCATGGTTTTAACGTTGGGAGTATAATCCTAATTCA
AATGATAAACTTCCTAACGGAGAGATCACGGGGATCCTCTCCCTACTATACGTAAATAAG
AAGCTATAATTAACTTTGCCGCACATCAGGAATGTGATTCAAGTACCTTTGCTGTGGTCA
CAGGACTGTTTGCACATCCACGGCTATTGAATACCACAACACGCCATCCTTTGCTTCTAG
CTCTCAAAAGCATATGCCGTACATATGTATCCTGACTCCCCCCTGTCAGACCGGGCTGCC
AATAACAAACCCCCAGCATCAAGCATTAGCCATAGCCCATAGCTAGTCAAAAACTGAATG
TGCATGAAAATACAAGTAGAACAGTACACATAGTACTGCAGATAACTATATAAGATGTAC
ACTTGTACAGAAAGACATGTCAATAGTCATTTATGCTGGAAGCAAAGTTGACTTTGACAT
GATAGATGCAAAACATGAATTTAGCACAAGAAAGTGTTCTGTTACGCGTTATGTTCAAAA
TTGTATTAAAACTGCCTATACTTTGTTGGCAGCAATTAGTTCTCTTTTTAACGGATTAGT
AGCAAAATCCTTGGCTCTTCAGATCTTTCGCTGAGCACTCGGTCGAGTGCTTAATAAAAT
TGCAAACGTATAATGTCCATGGCATCCTTTTGCTTTTCTTCAGTTGAAAGTTATGCAGGA
ATATTTTTCCTCATTTAATCTGCCCAACACTTATGGGTTTCAGCTCTAGCCTACTCCAAC
TTGTTTGGGACTAAANNNNNNNNNNNNNNTGTTGTTGTTGTTGTTGTTGTAATCCGCCCA
ACACCTGAATAGTTAATGATGTCATACTAATATGGCCATGATGAATAATGTCACTAGCAG
ATTAAGAAATAGAACTGGCACAACACATACAGGGAAACTTCGCACGCAGGAAGTAAAAAT
GAAAAATCCAGCAGAGATTTCCAAGGTGAAGAGTTTTTTCCCTGATTAGATCATTGTGAG
GAACAAAGGTCAAACATTTGCAATCATGATATTCATATGTGTTGCATGGTTCATCAGGTA
TTTGTTGCCTGACCTGTCATCTCTGTAAGTATATATATGCCCACTGCATAAATGTTTAGC
CATGGTACTACTTGGAATATCATATGCAGTTGGAATCAAACTATATTTCATTCTGCATGT
GCTCCGGTAGACACCCCTATTTCACCTAAGATCTCTTCACCCGACTACATGAATCTATTT
ACGAATTGAACTTCCGGATGTAAAATCTCAGGAGTGCACTACTCAACGCACAATTAATCC
TCCTACACAGAAATGAGAGATCATCCCCGAACTAATCAAAACTGGCATCACATCCTCCCA
TTTCTACACAGGCAAATTACACACGGTTTTCGACCACAAGGCGAAAGTCAAAATGTCACC
GGCAGTGGCATCCATGACGCTAAACAAAATGTCACGCTTTGTTTGTGTCCTCTTTGCAAC
ACTAGGAGAAGGAAAGCGACGCCATACCAGAAGGATTAGCACAGGTGCATCTCCGGGCAA
CGTGCGGTCGTCGCCGGAGACCCAGTCGAGGGCGACGGCTCCGTCGTCCGGGGTGCGCAG
GCACTCGCGCCGGAATGCCACGGCGGGGAGCGAGCGCGTGAAGGCCGCGAAGATGGTCTC
GACGTGGCGGTTGGATGCGAAGACGGGGAAGGCGCGGTACGGGCGGCGGAGGCTTTCGAA
GCCCGCGAGGAGGCCGCGCCGCGCGCCGGCGATCTCGAGGCTCGAGTGCGGGAGGAGAGG
CTGCTCCCCGTCGGCGCAGTCCCGGTCGCGGCTTCGGGAGGAGACGACGGAGGAGGAGAG
CGACATGGTGGTTGGTAGGAGTAGGTAGCGGAGGCGAGGGGCGTAGCGGCGGGCGGTGCC
GGCGAATGGGGATGGCGCTTGTATCGCGGCCATCAGATTCGCGCCTGCAGTGTGCACTCG
GGTTTGGAATACGCCTTCTCGCTTGTCTGGACAGCTAGGAACCCAGGAACCAGTAAGAAT
TGTGGTTGGCTCGTTGACACGTGGGGAAAAGGAGGATCGAGGAGTTACCTTTTTTTTAAT
CAAAAAAATAGTCATGGCAGCAGAAAGAACACAAAAATAACATCAAAGATCACCTAGTAG
CAAGAGTAAGGCCTTTTGGATCCGACCTTCATGGATGCCGAATTTTTTAAAAAATTCAAA
ATTAAAACTTTACTGTTTAAAAAAATCCTGAAAAAACTATGCATGTACATAAGAATGTAA
TGTACTCCCTCCGTACCACAATATTTGTTGTTGGAGAGAACTAGTCTAGTTTTCCCTAAC
AACAAATATTTAGGAACAGAGGGAGTACGTGTGTGTAAAAATTTACAATGAAATACCATG
AATTACAACGTGTACGAAAAAGACAAATTTAAGACCTCGGTTGATGAACAGTATCATGTA
TATCTCCCCTAATAATAAAGCGTGGAGCGCTTCTGCCGTCCGTCGCTGGCGTTTTTACAG
AAAAGTCCTTCTGTTCCTTCGAAATCAACCCGCGGTCCTATAGTAAGTGGAAAAAACGTT
TCGTTGTTTTTGTAAAAAAGCCCCTGGGCAGA
