Contig Data
morexGenes
Links



Map Locations of contig_128112 (3200 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_128112

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_3139 3 562 bp MLOC_3139.1 Available Available None
MLOC_3140 1 151 bp MLOC_3140.1 Not available Available None





CDS Structure of MLOC_3139






CDS Structure of MLOC_3140






Contig Sequence (3200 bp)

>contig_128112 3200 assembly3_WGSMorex_rbca.fasta
AGATTGCAAAAACAAAGCTACTCAACGTGACAAAAGTACACCCAGTTTTCAAAAGTTTTC
AGTTTGGCAAGTGGCAACAACGAGAGCAGACAGCCAAACAAGTTACTACTCTAGTTATTA
ACAAGCACGTCAACAGCGAGCTAGCTTAATGAATGTGTCAAACAAGAAATGTCGGAAGGA
CCTGACCACTCCTCTCCTCTCTTGTGTGAAGGAAGAAAATTTCAGTTTTCTTGTCACAGA
TTTGATGGCACAATCTTTTCTTCATTCTAACTGTAGATCAGATTAAGTAGTATATTTGCA
CAACAAAGCACACTGAATGATTTTACACGGCACAGACAGCTGGTGTATGTCATTTCCTGG
TCTAATTTTCTTTGCTGAGTGCAAGTAAATGACACAAAATGACCAAANNNGCAGTCGGCA
GTCAATGTGTATTTTGTTTAAAACACCCAACAATCCACTACTAATAGTAGTTGCACTAAA
AAAGAAGGAATGCTAGCAGGCAGGTGGCAATTAAACAAAGTTAACGAAACTGGACAGGGA
CAACTATTGGTTTATAACAGGCTTACTATGAACAAAAAGCTGGCATAATATAAATAGAAG
ATGGTACCTTAAGGCGGCTCCCAGGATCATGGGCAGCGCGCTGAGGTGAAAAGCGAGGCG
CTAGCCGATTCCGTCGGCGACGGATCCGCTGAACAGGCATCCGACGAATGCTCCCCCATG
CATATGCTGACCATGAGCCCTGCATCCATCCACGGCAGGAAGCGCGCGCACACCAGCTCT
GCCATCGAACTGATTAGAGATCACAGCTGCACACGCAGAACCACACACAAGGCGGAGAAG
ATAATAGTGGTGTGAGCAATCTAAACCTGCAGGTGCATAATCTTCTAAGGAGAAATGGAA
GAAAATTTGAGTACCTTAGCACACCCCACCGCAAGATCCTTGGTGCTGAAACTCGAGAAG
GGGCCGAAGAACACATGCAATCAGATCTGCAGTTTAGATGTGGAATGGCGGGGAATCAGT
GCTGCAGTTCAGCCATTGCAGGATGTTTGTGTTGATCAATTTGTTATGACGGATAGAAGT
TGTATAGCAAACAAATGATTAGTGTTAATTGTTGTCCTTGAGCTAAATATCAAGAGGTTA
ATAAGAATAGAGGAAACAGAGCATACCTGGTGTTGTTGGCGGCAAGCAGGACCAAAACAG
CAGTGAAATCTAAGACGGTGAACCTCAACCTCAACACCAAACACCAAAAGAGCATACATG
GTGTTCTACCAAGCGACCAAACTTCAGAGATCTGTGGAGGGAACCAGAAATATAGTTTAC
GATTTACAACCTACAAATAGAAAATAACCAAATGCTCAAACTAAGATCAACAAAGACACT
CGATTCGGAGGATGTAATTGATCCATCGGAGCAGACTAAGGAAGACAAATAAAATTACCA
GGACCAAGGGATGCCGTCACACGCCTCATATCTTGTATTGGTCCAGGAGTTAGCTGGAAA
CCTTCTCCTTCAAAAAGCAGCGGCCACAGCTCTGCTGTTGGAATGCTCACAGCTCGCAAC
ACACACAGAACACAAGGAAACACAATTGCAGTCCAGGGTTGAGAAGAGAATGGTGTGAGC
AAGCTAGATGCGCAGATGCCTTCTTTAGAAAATGTAACCCAATGTATGGTATGGAATTTT
GGGGGCAAGTTCTTGGTCGATTGCATCGATAATTGATGGTTGTACTTAATAAAATAACAC
TACCTTTCAGGAGTAGAGCTTTTGTTTTAACATGCTTTAAAATAAGCATCATGTGTCTAA
CTGTAGGAATAGAGATTGGTCTGTACTTCTTCAACCAATCACATTGATCTTGAAAAAATC
AGCACTGTCAAGGTATCCATTTTAGACAATTAGTTGAGCCCAATTAGAAATAAATTACTC
ACTCCAGCTAGCATTGTTCTTGGTTAACGTATAATAATAGCGACAACTAATTAAGCTTTC
TGACAAAACAGATATCATCACAGCTCCATCCACACATGCTACTGCCTCGAGGAGAGCAAC
AAACATATAAATATGAAACAACAAATTCCGGGAAGCAGCTGTGATTGGTCGACCAAGTGT
GACGTTATGCAAACTGGATGATTGGTGCCCAGGTGGAAACCGTTTAATTTATCACTAAGG
CGCGCCGTATCGGCCAGACAAATAATTGAGGCTTGCCATATCAGCCAGAAAATAAATGGC
CCATACAAGGGGAAATTAAAATGTTCCCGCGTGTAAGCATGAAAGATCCTGATCGAATGG
GGGTCTGAGGGTAGGCTCACCGGTGGTTAGGTTGCAGGCGTCGCTGGAGAAGCCGAGCGC
GGTGACGCAGTCGGTGTGGCCCCTGAGGGTGTTGACGTCGAGGTGGTGGTGCTTCTTGGC
CGCCTCCTGGAAGAAAACACACAGTATAGCTGAGACCACACTCACTTCACATTCCAACAT
ATGTTTATGGAATTATGCGTGTCTACATTTTAATAGAAATTGCAGGAATGGATGCTCTCC
TACAATACACTCCGAATCTAATTGGTAGTGAACACAGTTGCCTGCAACCGAAGACACCAT
GGATCCCTATCTGTGAGAGTAAGATCGATACTAGCTAGTATGTGCGTGGGATCATGGATC
CCTGTCTGTAACTAGTATGCAGGATGCGTGTGCGAGATGGGGGTGGAGACAAGATGAGAC
GAGACGAGACGAGATGGGGATGGACCTTGTCGGCGGCGGAGGGGTGGTGGTGCTGGGGCC
GTCCCTTCTTGTTCTGGGCGGCAGGGCGGAGGCGGCGACGGCGGAGGGGGGCACGTGCGT
GATGTCGGCGCGCTTGCGGTGCAGGTACCCGGCGAGGAAGACGAGCGCCGATGCAGGGAG
TGGGGGCACAGATGGAGGGCACCGGTCGAGCCTTCGATGGGGCGCCGGTCGAGCTGGTGG
GGGAGGAGTGGATGGTGGGGTGGGGCGCCGGTGGAGCAGGCTCTGTTCAGGGCGCCACTG
AGATCTGGGGAGGCTACGGGAGGGAGAGGTCAGGGAATAGCGCGCGGTCGATTTGGGAAA
AAAATCATCAGCGCGCGGTCGATTTGGGGAAAGCCCGCTTCATATTTCGCTATGTCTCGC
GTTTTTTTTGCCAAACTACTAATGGCGCACCACCTACAAATGCGCCATTAGTAACCCACC
TACAAATGCGCCATTAGTAA